RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 PPP1R12BO60237 982 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-208ENST00000559686 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
SNRPA1-208ENST00000559686 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
SNRPA1-208ENST00000559686 MYD88Q99836 296 aa11.66□□□□□ -0.54
SNRPA1-208ENST00000559686 PCDHAC2Q9Y5I4 1007 aa11.66□□□□□ -0.54
SNRPA1-208ENST00000559686 OTOFQ9HC10 1997 aa11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 F8W031 263 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 NBPF12Q5TAG4 269 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 TTLL5Q6EMB2 1281 aa11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 TXNRD3Q86VQ6 643 aa11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 ZBTB38Q8NAP3 1195 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 ELP3Q9H9T3 547 aa11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
SNRPA1-208ENST00000559686 MED23Q9ULK4 1368 aa11.65□□□□□ -0.55
SNRPA1-208ENST00000559686 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.55
SNRPA1-208ENST00000559686 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 PDE8AO60658 829 aa11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 KLRK1P26718 216 aa11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 GTF2IP78347 998 aa11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 DLGAP5Q15398 846 aa11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 STRIP1Q5VSL9 837 aa11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 ARHGAP39Q9C0H5 1083 aa11.64□□□□□ -0.55
SNRPA1-208ENST00000559686 MTFR1Q15390 333 aa11.63□□□□□ -0.55
SNRPA1-208ENST00000559686 OPTNQ96CV9 577 aa11.63□□□□□ -0.55
SNRPA1-208ENST00000559686 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
SNRPA1-208ENST00000559686 DBF4Q9UBU7 674 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-208ENST00000559686 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-208ENST00000559686 CEP290O15078 2479 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 SOX1O00570 391 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 USP2O75604 605 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 IREB2P48200 963 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 TRIM28Q13263 835 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 ARHGEF6Q15052 776 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 MAP3K11Q16584 847 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 SUPT20HL1Q3ZLR7 823 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 SHISA4Q96DD7 197 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 ZBED3Q96IU2 234 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 COA1Q9GZY4 146 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 PNNQ9H307 717 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 ZFYVE28Q9HCC9 887 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 MINPP1Q9UNW1 487 aa11.62□□□□□ -0.55
SNRPA1-208ENST00000559686 AOX1Q06278 1338 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 CCL15-CCL14A0A0B4J2E2 113 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 PCCAP05165 728 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 HSP90B1P14625 803 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.556e-6■□□□□ 9
SNRPA1-208ENST00000559686 CCL15Q16663 113 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 ANKRD13AQ8IZ07 590 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 BRI3BPQ8WY22 251 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 GREM2Q9H772 168 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 HYPKQ9NX55 129 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 JAG2Q9Y219 1238 aa11.61□□□□□ -0.55
SNRPA1-208ENST00000559686 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 TMPOP42166 694 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 CTSWP56202 376 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 KIF22Q14807 665 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 CFAP100Q494V2 611 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 CCDC146Q8IYE0 955 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 FAM43AQ8N2R8 423 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 MS4A4AQ96JQ5 239 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 CWC25Q9NXE8 425 aaPredicted RBP11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 MYH3P11055 1940 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 ZNF804BA4D1E1 1349 aa11.6□□□□□ -0.55
SNRPA1-208ENST00000559686 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 MYO1BO43795 1136 aa11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 KCNJ4P48050 445 aa11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 LMOD3Q0VAK6 560 aa11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 RASA3Q14644 834 aa11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 CERS5Q8N5B7 392 aa11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 PRMT6Q96LA8 375 aaPredicted RBP11.59□□□□□ -0.55
SNRPA1-208ENST00000559686 ELL2O00472 640 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 CHL1O00533 1208 aa11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 CCDC191Q8NCU4 936 aa11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 HTATIP2Q9BUP3 242 aa11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 BIN2Q9UBW5 565 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 PPP2R3BQ9Y5P8 575 aa11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 LAMA3Q16787 3333 aa11.58□□□□□ -0.56
SNRPA1-208ENST00000559686 SNAP23O00161 211 aa11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 ZBTB7BO15156 539 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 TTLL11Q8NHH1 800 aa11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 PRO3102Q9H379 93 aa11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 CD209Q9NNX6 404 aa11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 STAP2Q9UGK3 403 aa11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 LEMD3Q9Y2U8 911 aa11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 NR2E3Q9Y5X4 410 aa11.57□□□□□ -0.56
SNRPA1-208ENST00000559686 CCL5P13501 91 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms