RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 RBM25P49756 843 aaKnown RBP20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 MPNDQ8N594 471 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 CNKSR1Q969H4 720 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 KIF2CQ99661 725 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 MAST3O60307 1309 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 HIP1O00291 1037 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 RIMBP2O15034 1052 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 CHAF1AQ13111 956 aaPredicted RBP20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 ZMYM1Q5SVZ6 1142 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 DPP8Q6V1X1 898 aaPredicted RBP20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 OSBP2Q969R2 916 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 PALD1Q9ULE6 856 aa20.92■□□□□ 0.94
CHRNA3-206ENST00000559658 C21orf2O43822 256 aa20.91■□□□□ 0.94
CHRNA3-206ENST00000559658 C15orf52Q6ZUT6 534 aaKnown RBP20.91■□□□□ 0.94
CHRNA3-206ENST00000559658 GNL3LQ9NVN8 582 aaKnown RBP20.91■□□□□ 0.94
CHRNA3-206ENST00000559658 RAD50Q92878 1312 aa20.91■□□□□ 0.94
CHRNA3-206ENST00000559658 PDE6AP16499 860 aa20.9■□□□□ 0.94
CHRNA3-206ENST00000559658 SLC9C2Q5TAH2 1124 aa20.9■□□□□ 0.94
CHRNA3-206ENST00000559658 RUFY2Q8WXA3 655 aa20.9■□□□□ 0.94
CHRNA3-206ENST00000559658 PUS7LQ9H0K6 701 aaKnown RBP20.9■□□□□ 0.94
CHRNA3-206ENST00000559658 CCDC171Q6TFL3 1326 aa20.89■□□□□ 0.94
CHRNA3-206ENST00000559658 TCRBV5S4A2TA0A5A2 114 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 FRAT2O75474 233 aaPredicted RBP20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 ADD2P35612 726 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 TTF1Q15361 905 aaPredicted RBP20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 WASHC4Q2M389 1173 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 VPS53Q5VIR6 699 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 ZNF384Q8TF68 577 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 ABCF2Q9UG63 623 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 DENND2AQ9ULE3 1009 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 ZNF532Q9HCE3 1301 aa20.89■□□□□ 0.93
CHRNA3-206ENST00000559658 ZNF804AQ7Z570 1209 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 TTLL6Q8N841 843 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 TDRD7Q8NHU6 1098 aaKnown RBP20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 CD209Q9NNX6 404 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 MAST2Q6P0Q8 1798 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 ANP32AP39687 249 aaKnown RBP20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 GRIK5Q16478 980 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 MCMDC2Q4G0Z9 681 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 ADGRA1Q86SQ6 560 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 MAGEB6Q8N7X4 407 aa20.88■□□□□ 0.93
CHRNA3-206ENST00000559658 ZNF646O15015 1829 aaPredicted RBP20.87■□□□□ 0.93
CHRNA3-206ENST00000559658 SCN9AQ15858 1988 aa20.87■□□□□ 0.93
CHRNA3-206ENST00000559658 SEMA3EO15041 775 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 PRDX5P30044 214 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 DOK7Q18PE1 504 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 NLGN2Q8NFZ4 835 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 FOXP2O15409 715 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 IL1R1P14778 569 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 APPBP2Q92624 585 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 HELLSQ9NRZ9 838 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 LRP2BPQ9P2M1 347 aa20.86■□□□□ 0.93
CHRNA3-206ENST00000559658 COL4A5P29400 1685 aa20.85■□□□□ 0.93
CHRNA3-206ENST00000559658 TAF6LQ9Y6J9 622 aa20.85■□□□□ 0.93
CHRNA3-206ENST00000559658 PDS5AQ29RF7 1337 aaKnown RBP20.85■□□□□ 0.93
CHRNA3-206ENST00000559658 CCDC88AQ3V6T2 1871 aa20.85■□□□□ 0.93
CHRNA3-206ENST00000559658 ZFYP08048 801 aaPredicted RBP20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 TGFB2P61812 414 aa20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 KIAA1211Q6ZU35 1233 aa20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 RAI14Q9P0K7 980 aa20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 HSPA4P34932 840 aa20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 MAP3K12Q12852 859 aa20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 RASEFQ8IZ41 740 aa20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 DBNDD1Q9H9R9 158 aa20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 RBM8AQ9Y5S9 174 aaKnown RBP20.84■□□□□ 0.93
CHRNA3-206ENST00000559658 UBE3CQ15386 1083 aa20.83■□□□□ 0.92
CHRNA3-206ENST00000559658 MAP4K1Q92918 833 aa20.83■□□□□ 0.92
CHRNA3-206ENST00000559658 RTFDC1Q9BY42 306 aaPredicted RBP20.83■□□□□ 0.92
CHRNA3-206ENST00000559658 ZC3H12CQ9C0D7 883 aaKnown RBP20.83■□□□□ 0.92
CHRNA3-206ENST00000559658 TMX4Q9H1E5 349 aaPredicted RBP20.83■□□□□ 0.92
CHRNA3-206ENST00000559658 KCNQ5Q9NR82 932 aa20.83■□□□□ 0.92
CHRNA3-206ENST00000559658 GPAA1O43292 621 aa20.82■□□□□ 0.92
CHRNA3-206ENST00000559658 AOC3Q16853 763 aa20.82■□□□□ 0.92
CHRNA3-206ENST00000559658 MIGA1Q8NAN2 632 aa20.82■□□□□ 0.92
CHRNA3-206ENST00000559658 ADAMTSL1Q8N6G6 1762 aa20.82■□□□□ 0.92
CHRNA3-206ENST00000559658 COL9A3Q14050 684 aaPredicted RBP20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 MXD3Q9BW11 206 aa20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 PIM2Q9P1W9 311 aa20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 CD2BP2O95400 341 aaKnown RBP20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 MECOMQ03112 1051 aa20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 FER1L6Q2WGJ9 1857 aa20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 ZSCAN25Q6NSZ9 544 aa20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 TICAM2Q86XR7 235 aa20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 CD2APQ9Y5K6 639 aa20.81■□□□□ 0.92
CHRNA3-206ENST00000559658 MBD4O95243 580 aa20.8■□□□□ 0.92
CHRNA3-206ENST00000559658 HSPD1P10809 573 aaKnown RBP20.8■□□□□ 0.92
CHRNA3-206ENST00000559658 SLC4A3P48751 1232 aa20.8■□□□□ 0.92
CHRNA3-206ENST00000559658 NECTIN1Q15223 517 aa20.8■□□□□ 0.92
CHRNA3-206ENST00000559658 CCDC93Q567U6 631 aa20.8■□□□□ 0.92
CHRNA3-206ENST00000559658 NSUN4Q96CB9 384 aaKnown RBP20.8■□□□□ 0.92
CHRNA3-206ENST00000559658 COA1Q9GZY4 146 aa20.8■□□□□ 0.92
CHRNA3-206ENST00000559658 SALL1Q9NSC2 1324 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 ZBTB22O15209 634 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 EIF5BO60841 1220 aaKnown RBP20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 CYP7A1P22680 504 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 GTF2IP78347 998 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 LRRFIP1Q32MZ4 808 aaKnown RBP20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 LCORLQ8N3X6 602 aa20.79■□□□□ 0.92
CHRNA3-206ENST00000559658 ARMT1Q9H993 441 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms