RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MX1P20591 662 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 FKBP1AP62942 108 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 RASGRF1Q13972 1273 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 DOK7Q18PE1 504 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 DBNDD1Q9H9R9 158 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 KCNQ5Q9NR82 932 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 ECHDC1Q9NTX5 307 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 HMG20BQ9P0W2 317 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 SALL1Q9NSC2 1324 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 CCDC158Q5M9N0 1113 aa18.13■□□□□ 0.49
SNRPA1-207ENST00000559309 STRIP1Q5VSL9 837 aa18.13■□□□□ 0.49
SNRPA1-207ENST00000559309 C9orf131Q5VYM1 1079 aa18.13■□□□□ 0.49
SNRPA1-207ENST00000559309 DACT2Q5SW24 774 aa18.12■□□□□ 0.49
SNRPA1-207ENST00000559309 NIM1KQ8IY84 436 aa18.12■□□□□ 0.49
SNRPA1-207ENST00000559309 GMLQ99445 158 aa18.12■□□□□ 0.49
SNRPA1-207ENST00000559309 DENND2AQ9ULE3 1009 aa18.12■□□□□ 0.49
SNRPA1-207ENST00000559309 VIL1P09327 827 aaKnown RBP18.11■□□□□ 0.49
SNRPA1-207ENST00000559309 CXCL9Q07325 125 aa18.11■□□□□ 0.49
SNRPA1-207ENST00000559309 JDP2Q8WYK2 163 aa18.11■□□□□ 0.49
SNRPA1-207ENST00000559309 HAUS7Q99871 368 aa18.11■□□□□ 0.49
SNRPA1-207ENST00000559309 GNL3LQ9NVN8 582 aaKnown RBP18.11■□□□□ 0.49
SNRPA1-207ENST00000559309 MYO5AQ9Y4I1 1855 aaKnown RBP18.11■□□□□ 0.49
SNRPA1-207ENST00000559309 IGSF3O75054 1194 aa18.1■□□□□ 0.49
SNRPA1-207ENST00000559309 TTC39AQ5SRH9 613 aa18.1■□□□□ 0.49
SNRPA1-207ENST00000559309 PI16Q6UXB8 463 aa18.1■□□□□ 0.49
SNRPA1-207ENST00000559309 CERS5Q8N5B7 392 aa18.1■□□□□ 0.49
SNRPA1-207ENST00000559309 SPATA5Q8NB90 893 aa18.1■□□□□ 0.49
SNRPA1-207ENST00000559309 RNF181Q9P0P0 153 aa18.1■□□□□ 0.49
SNRPA1-207ENST00000559309 ZNF541Q9H0D2 1346 aa18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 USP17L3A6NCW0 530 aa18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 USP17L4A6NCW7 530 aa18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 GLRX3O76003 335 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 GORABQ5T7V8 394 aa18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 USP17L1Q7RTZ2 530 aa18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 VPS37DQ86XT2 251 aa18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 MAST2Q6P0Q8 1798 aa18.09■□□□□ 0.49
SNRPA1-207ENST00000559309 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.48
SNRPA1-207ENST00000559309 SKAP1Q86WV1 359 aa18.08■□□□□ 0.48
SNRPA1-207ENST00000559309 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.48
SNRPA1-207ENST00000559309 GPATCH3Q96I76 525 aa18.08■□□□□ 0.48
SNRPA1-207ENST00000559309 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-207ENST00000559309 IQSEC3Q9UPP2 1182 aaPredicted RBP18.08■□□□□ 0.48
SNRPA1-207ENST00000559309 WDR90Q96KV7 1748 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 PSMD14O00487 310 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 ERC2O15083 957 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 ZAP70P43403 619 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 GTF2IP78347 998 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 CIAPIN1Q6FI81 312 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 SUGT1Q9Y2Z0 365 aa18.07■□□□□ 0.48
SNRPA1-207ENST00000559309 GSPT1P15170 499 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 GRIK5Q16478 980 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 TICAM2Q86XR7 235 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 GPC2Q8N158 579 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 AGBL3Q8NEM8 1001 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 ZNF384Q8TF68 577 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 TBC1D22AQ8WUA7 517 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 MYH7P12883 1935 aa18.06■□□□□ 0.48
SNRPA1-207ENST00000559309 MYO3BQ8WXR4 1341 aa18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 RAD17O75943 681 aa18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 DPF2Q92785 391 aa18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 L3MBTL3Q96JM7 780 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 MRIQ9BWK5 157 aa18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 ANTXR1Q9H6X2 564 aa18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 NDUFB9Q9Y6M9 179 aa18.05■□□□□ 0.48
SNRPA1-207ENST00000559309 TOMM70O94826 608 aa18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 RPS12P25398 132 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 MMP14P50281 582 aa18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 EIF6P56537 245 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 TNIP1Q15025 636 aa18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 MFSD14BQ5SR56 506 aa18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 PIH1D3Q9NQM4 214 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 SNRKQ9NRH2 765 aa18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 PAG1Q9NWQ8 432 aa18.04■□□□□ 0.48
SNRPA1-207ENST00000559309 SCN4AP35499 1836 aa18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 G3V3G9 751 aa18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 APLP1P51693 650 aa18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 DCAF8Q5TAQ9 597 aa18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 TMED8Q6PL24 325 aaPredicted RBP18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 ZGPATQ8N5A5 531 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 EDC3Q96F86 508 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 MXD3Q9BW11 206 aa18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 RFX7Q2KHR2 1363 aa18.03■□□□□ 0.48
SNRPA1-207ENST00000559309 GLTPD2A6NH11 291 aa18.02■□□□□ 0.48
SNRPA1-207ENST00000559309 PRDX5P30044 214 aa18.02■□□□□ 0.48
SNRPA1-207ENST00000559309 SCNN1DP51172 638 aa18.02■□□□□ 0.48
SNRPA1-207ENST00000559309 TBC1D9Q6ZT07 1266 aa18.02■□□□□ 0.48
SNRPA1-207ENST00000559309 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
SNRPA1-207ENST00000559309 NSUN4Q96CB9 384 aaKnown RBP18.02■□□□□ 0.48
SNRPA1-207ENST00000559309 JAG2Q9Y219 1238 aa18.02■□□□□ 0.48
SNRPA1-207ENST00000559309 AK9Q5TCS8 1911 aa18.02■□□□□ 0.47
SNRPA1-207ENST00000559309 ZNF280AP59817 542 aaPredicted RBP18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 HDLBPQ00341 1268 aaKnown RBP18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
SNRPA1-207ENST00000559309 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms