RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 HELBQ8NG08 1087 aaPredicted RBP20.74■□□□□ 0.91
CDC42BPB-205ENST00000559245 SLC10A4Q96EP9 437 aa20.74■□□□□ 0.91
CDC42BPB-205ENST00000559245 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.74■□□□□ 0.91
CDC42BPB-205ENST00000559245 MANSC4A6NHS7 340 aaPredicted RBP20.73■□□□□ 0.91
CDC42BPB-205ENST00000559245 INHBEP58166 350 aa20.73■□□□□ 0.91
CDC42BPB-205ENST00000559245 MAP3K11Q16584 847 aa20.73■□□□□ 0.91
CDC42BPB-205ENST00000559245 C15orf52Q6ZUT6 534 aaKnown RBP20.73■□□□□ 0.91
CDC42BPB-205ENST00000559245 PCDHAC2Q9Y5I4 1007 aa20.73■□□□□ 0.91
CDC42BPB-205ENST00000559245 OTOFQ9HC10 1997 aa20.73■□□□□ 0.91
CDC42BPB-205ENST00000559245 IL16Q14005 1332 aa20.73■□□□□ 0.91
CDC42BPB-205ENST00000559245 PPP1R12BO60237 982 aaPredicted RBP20.72■□□□□ 0.91
CDC42BPB-205ENST00000559245 CCDC184Q52MB2 194 aa20.72■□□□□ 0.91
CDC42BPB-205ENST00000559245 IFNL1Q8IU54 200 aa20.72■□□□□ 0.91
CDC42BPB-205ENST00000559245 PPP2R3BQ9Y5P8 575 aa20.72■□□□□ 0.91
CDC42BPB-205ENST00000559245 F8W031 263 aaPredicted RBP20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 ZBTB48P10074 688 aaPredicted RBP20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 IL1R1P14778 569 aa20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 IFIT5Q13325 482 aaKnown RBP20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 CFAP100Q494V2 611 aa20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 ZNF804AQ7Z570 1209 aa20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 WNK4Q96J92 1243 aa20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 CLMNQ96JQ2 1002 aa20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 CHMP3Q9Y3E7 222 aa20.71■□□□□ 0.91
CDC42BPB-205ENST00000559245 RBBP6Q7Z6E9 1792 aaKnown RBP20.7■□□□□ 0.9
CDC42BPB-205ENST00000559245 CLRN2A0PK11 232 aa20.7■□□□□ 0.9
CDC42BPB-205ENST00000559245 MYO1BO43795 1136 aa20.7■□□□□ 0.9
CDC42BPB-205ENST00000559245 FOXO4P98177 505 aa20.7■□□□□ 0.9
CDC42BPB-205ENST00000559245 KIAA0100Q14667 2235 aaKnown RBP20.7■□□□□ 0.9
CDC42BPB-205ENST00000559245 SPDYE2BA6NHP3 402 aa20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 SPDYE6P0CI01 402 aa20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 FKBP1AP62942 108 aaKnown RBP20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 SUPT20HL1Q3ZLR7 823 aa20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 PRMT6Q96LA8 375 aaPredicted RBP20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 VEZTQ9HBM0 779 aa20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 TRIM17Q9Y577 477 aa20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 FANCIQ9NVI1 1328 aa20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 ARAP2Q8WZ64 1704 aa20.69■□□□□ 0.9
CDC42BPB-205ENST00000559245 HTTP42858 3142 aa20.68■□□□□ 0.9
CDC42BPB-205ENST00000559245 UNCXA6NJT0 531 aa20.68■□□□□ 0.9
CDC42BPB-205ENST00000559245 IGF2BP3O00425 579 aaKnown RBP eCLIP20.68■□□□□ 0.9
CDC42BPB-205ENST00000559245 NBPF12Q5TAG4 269 aaPredicted RBP20.68■□□□□ 0.9
CDC42BPB-205ENST00000559245 JAG2Q9Y219 1238 aa20.68■□□□□ 0.9
CDC42BPB-205ENST00000559245 VAMP4O75379 141 aa20.67■□□□□ 0.9
CDC42BPB-205ENST00000559245 OTOP1Q7RTM1 612 aa20.67■□□□□ 0.9
CDC42BPB-205ENST00000559245 AOX1Q06278 1338 aa20.67■□□□□ 0.9
CDC42BPB-205ENST00000559245 CENPFP49454 3210 aa20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 F6X3S4 739 aa20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 PLIN1O60240 522 aa20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 IREB2P48200 963 aaKnown RBP20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 RBM5P52756 815 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 LMBR1LQ6UX01 489 aa20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 ZNF594Q96JF6 807 aaPredicted RBP20.66■□□□□ 0.9
CDC42BPB-205ENST00000559245 USP2O75604 605 aaPredicted RBP20.65■□□□□ 0.9
CDC42BPB-205ENST00000559245 EPHA10Q5JZY3 1008 aa20.65■□□□□ 0.9
CDC42BPB-205ENST00000559245 BEND3Q5T5X7 828 aa20.65■□□□□ 0.9
CDC42BPB-205ENST00000559245 GJA5P36382 358 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 RASA3Q14644 834 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 CCDC57Q2TAC2 916 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 TAF7LQ5H9L4 462 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 LDHAL6AQ6ZMR3 332 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 ANKRD13AQ8IZ07 590 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 ERO1AQ96HE7 468 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 CNNM1Q9NRU3 951 aa20.64■□□□□ 0.89
CDC42BPB-205ENST00000559245 FAM205AQ6ZU69 1335 aa20.63■□□□□ 0.89
CDC42BPB-205ENST00000559245 EXOSC9Q06265 439 aaKnown RBP20.63■□□□□ 0.89
CDC42BPB-205ENST00000559245 CRHR2Q13324 411 aa20.63■□□□□ 0.89
CDC42BPB-205ENST00000559245 INTS3Q68E01 1043 aaKnown RBP20.63■□□□□ 0.89
CDC42BPB-205ENST00000559245 OTUD7BQ6GQQ9 843 aa20.63■□□□□ 0.89
CDC42BPB-205ENST00000559245 CD99L2Q8TCZ2 262 aa20.63■□□□□ 0.89
CDC42BPB-205ENST00000559245 MKI67P46013 3256 aaKnown RBP20.62■□□□□ 0.89
CDC42BPB-205ENST00000559245 PTPN22Q9Y2R2 807 aa20.62■□□□□ 0.89
CDC42BPB-205ENST00000559245 POTEFA5A3E0 1075 aa20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 GRM8O00222 908 aa20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 TNFAIP1Q13829 316 aa20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 SPDYE2Q495Y8 402 aa20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 MFSD14BQ5SR56 506 aa20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 WDR63Q8IWG1 891 aa20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 PTPN18Q99952 460 aa20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 ZNF70Q9UC06 446 aaPredicted RBP20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
CDC42BPB-205ENST00000559245 TESPA1A2RU30 521 aaPredicted RBP20.6■□□□□ 0.89
CDC42BPB-205ENST00000559245 TDRD7Q8NHU6 1098 aaKnown RBP20.6■□□□□ 0.89
CDC42BPB-205ENST00000559245 ELP3Q9H9T3 547 aa20.6■□□□□ 0.89
CDC42BPB-205ENST00000559245 SERPINA10Q9UK55 444 aa20.6■□□□□ 0.89
CDC42BPB-205ENST00000559245 TTF2Q9UNY4 1162 aaKnown RBP20.6■□□□□ 0.89
CDC42BPB-205ENST00000559245 GYG1P46976 350 aa20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 SP3Q02447 781 aa20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 UBE4AQ14139 1066 aa20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 GCC1Q96CN9 775 aa20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 OPTNQ96CV9 577 aa20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 TDRD3Q9H7E2 651 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 EFCC1Q9HA90 598 aa20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 C9orf78Q9NZ63 289 aaPredicted RBP20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 BRCA2P51587 3418 aa20.59■□□□□ 0.89
CDC42BPB-205ENST00000559245 HIBADHP31937 336 aaKnown RBP20.58■□□□□ 0.89
CDC42BPB-205ENST00000559245 FAM84BQ96KN1 310 aaPredicted RBP20.58■□□□□ 0.89
CDC42BPB-205ENST00000559245 CDAN1Q8IWY9 1227 aa20.57■□□□□ 0.88
CDC42BPB-205ENST00000559245 DZIP1LQ8IYY4 767 aaKnown RBP20.57■□□□□ 0.88
CDC42BPB-205ENST00000559245 TEPSINQ96N21 525 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms