RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NFKBIEO00221 500 aa21.93■■□□□ 1.1
CLPX-203ENST00000558958 TTF1Q15361 905 aaPredicted RBP21.93■■□□□ 1.1
CLPX-203ENST00000558958 AOC3Q16853 763 aa21.93■■□□□ 1.1
CLPX-203ENST00000558958 C8orf34Q49A92 452 aa21.93■■□□□ 1.1
CLPX-203ENST00000558958 TAOK3Q9H2K8 898 aa21.93■■□□□ 1.1
CLPX-203ENST00000558958 PPIP5K2O43314 1243 aa21.92■■□□□ 1.1
CLPX-203ENST00000558958 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
CLPX-203ENST00000558958 FSD1Q9BTV5 496 aa21.92■■□□□ 1.1
CLPX-203ENST00000558958 ZNF277Q9NRM2 450 aaPredicted RBP21.92■■□□□ 1.1
CLPX-203ENST00000558958 LTBP3Q9NS15 1303 aa21.92■■□□□ 1.1
CLPX-203ENST00000558958 G3V3G9 751 aa21.91■■□□□ 1.1
CLPX-203ENST00000558958 DCAF8Q5TAQ9 597 aa21.91■■□□□ 1.1
CLPX-203ENST00000558958 TBC1D9Q6ZT07 1266 aa21.91■■□□□ 1.1
CLPX-203ENST00000558958 TICAM2Q86XR7 235 aa21.91■■□□□ 1.1
CLPX-203ENST00000558958 PIH1D3Q9NQM4 214 aaKnown RBP21.91■■□□□ 1.1
CLPX-203ENST00000558958 AK9Q5TCS8 1911 aa21.91■■□□□ 1.1
CLPX-203ENST00000558958 CHMLP26374 656 aa21.9■■□□□ 1.1
CLPX-203ENST00000558958 CHAF1AQ13111 956 aaPredicted RBP21.9■■□□□ 1.1
CLPX-203ENST00000558958 PODNQ7Z5L7 613 aa21.9■■□□□ 1.1
CLPX-203ENST00000558958 DBNDD1Q9H9R9 158 aa21.9■■□□□ 1.1
CLPX-203ENST00000558958 RFX7Q2KHR2 1363 aa21.9■■□□□ 1.1
CLPX-203ENST00000558958 FAM205AQ6ZU69 1335 aa21.89■■□□□ 1.1
CLPX-203ENST00000558958 MYH13Q9UKX3 1938 aa21.89■■□□□ 1.09
CLPX-203ENST00000558958 ECE2O60344 883 aa21.89■■□□□ 1.09
CLPX-203ENST00000558958 IARSP41252 1262 aaKnown RBP21.89■■□□□ 1.09
CLPX-203ENST00000558958 LARGE2Q8N3Y3 721 aa21.89■■□□□ 1.09
CLPX-203ENST00000558958 WDR66Q8TBY9 1149 aa21.89■■□□□ 1.09
CLPX-203ENST00000558958 SALL1Q9NSC2 1324 aa21.88■■□□□ 1.09
CLPX-203ENST00000558958 HIP1O00291 1037 aa21.88■■□□□ 1.09
CLPX-203ENST00000558958 JAG2Q9Y219 1238 aa21.88■■□□□ 1.09
CLPX-203ENST00000558958 CHD4Q14839 1912 aa21.87■■□□□ 1.09
CLPX-203ENST00000558958 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.093e-7■□□□□ 10.4
CLPX-203ENST00000558958 CASC1Q6TDU7 716 aa21.87■■□□□ 1.09
CLPX-203ENST00000558958 BACH2Q9BYV9 841 aa21.87■■□□□ 1.09
CLPX-203ENST00000558958 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
CLPX-203ENST00000558958 IDH1O75874 414 aaKnown RBP21.86■■□□□ 1.09
CLPX-203ENST00000558958 GTF2IP78347 998 aa21.86■■□□□ 1.09
CLPX-203ENST00000558958 RASSF7Q02833 373 aa21.86■■□□□ 1.09
CLPX-203ENST00000558958 LRRFIP1Q32MZ4 808 aaKnown RBP21.86■■□□□ 1.09
CLPX-203ENST00000558958 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.86■■□□□ 1.09
CLPX-203ENST00000558958 DIAPH3Q9NSV4 1193 aa21.86■■□□□ 1.09
CLPX-203ENST00000558958 LRP2BPQ9P2M1 347 aa21.86■■□□□ 1.09
CLPX-203ENST00000558958 COL4A5P29400 1685 aa21.86■■□□□ 1.09
CLPX-203ENST00000558958 RNF113AO15541 343 aaKnown RBP21.85■■□□□ 1.09
CLPX-203ENST00000558958 ZFYP08048 801 aaPredicted RBP21.85■■□□□ 1.09
CLPX-203ENST00000558958 MAP3K12Q12852 859 aa21.85■■□□□ 1.09
CLPX-203ENST00000558958 TTLL5Q6EMB2 1281 aa21.85■■□□□ 1.09
CLPX-203ENST00000558958 ARHGAP27Q6ZUM4 889 aa21.85■■□□□ 1.09
CLPX-203ENST00000558958 ZGPATQ8N5A5 531 aaKnown RBP21.85■■□□□ 1.09
CLPX-203ENST00000558958 TBC1D22AQ8WUA7 517 aa21.85■■□□□ 1.09
CLPX-203ENST00000558958 KCNQ5Q9NR82 932 aa21.85■■□□□ 1.09
CLPX-203ENST00000558958 YDJCA8MPS7 323 aa21.84■■□□□ 1.09
CLPX-203ENST00000558958 CHGBP05060 677 aa21.84■■□□□ 1.09
CLPX-203ENST00000558958 ZSCAN25Q6NSZ9 544 aa21.84■■□□□ 1.09
CLPX-203ENST00000558958 DOCK2Q92608 1830 aa21.84■■□□□ 1.09
CLPX-203ENST00000558958 MYO5AQ9Y4I1 1855 aaKnown RBP21.84■■□□□ 1.09
CLPX-203ENST00000558958 ADD2P35612 726 aa21.83■■□□□ 1.09
CLPX-203ENST00000558958 PRELPP51888 382 aa21.83■■□□□ 1.09
CLPX-203ENST00000558958 SLC9C2Q5TAH2 1124 aa21.83■■□□□ 1.09
CLPX-203ENST00000558958 SPTY2D1Q68D10 685 aaPredicted RBP21.83■■□□□ 1.09
CLPX-203ENST00000558958 ERICH6Q7L0X2 663 aa21.83■■□□□ 1.09
CLPX-203ENST00000558958 NIM1KQ8IY84 436 aa21.83■■□□□ 1.09
CLPX-203ENST00000558958 FAM227BQ96M60 508 aa21.83■■□□□ 1.09
CLPX-203ENST00000558958 IGSF3O75054 1194 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 PDE6AP16499 860 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 PRDX5P30044 214 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.08
CLPX-203ENST00000558958 MFSD14BQ5SR56 506 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 STRIP1Q5VSL9 837 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 CWC27Q6UX04 472 aaKnown RBP21.83■■□□□ 1.08
CLPX-203ENST00000558958 ESYT1Q9BSJ8 1104 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 RAI14Q9P0K7 980 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 ZNRF3Q9ULT6 936 aa21.83■■□□□ 1.08
CLPX-203ENST00000558958 SCN9AQ15858 1988 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 USP17L3A6NCW0 530 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 USP17L4A6NCW7 530 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 UBE3CQ15386 1083 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 SLFNL1Q499Z3 407 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 ZMYM1Q5SVZ6 1142 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 USP17L1Q7RTZ2 530 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 RUFY2Q8WXA3 655 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 JDP2Q8WYK2 163 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 FBXW7Q969H0 707 aa21.82■■□□□ 1.08
CLPX-203ENST00000558958 A0A0D9SFI3 127 aa21.81■■□□□ 1.08
CLPX-203ENST00000558958 TCRBV5S4A2TA0A5A2 114 aa21.81■■□□□ 1.08
CLPX-203ENST00000558958 LDHBP07195 334 aaKnown RBP21.81■■□□□ 1.08
CLPX-203ENST00000558958 FKBP1AP62942 108 aaKnown RBP21.81■■□□□ 1.08
CLPX-203ENST00000558958 DACT2Q5SW24 774 aa21.81■■□□□ 1.08
CLPX-203ENST00000558958 MAGEB6Q8N7X4 407 aa21.81■■□□□ 1.08
CLPX-203ENST00000558958 IL25Q9H293 177 aa21.81■■□□□ 1.08
CLPX-203ENST00000558958 MYH7P12883 1935 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 ZNF532Q9HCE3 1301 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 SGSM2O43147 1006 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 SEC24BO95487 1268 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 MECOMQ03112 1051 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 GRIK5Q16478 980 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 TMED8Q6PL24 325 aaPredicted RBP21.8■■□□□ 1.08
CLPX-203ENST00000558958 CERS5Q8N5B7 392 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 ZNF384Q8TF68 577 aa21.8■■□□□ 1.08
CLPX-203ENST00000558958 NSUN4Q96CB9 384 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms