RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 SHISA5Q8N114 240 aa5.41□□□□□ -1.54
LRRC28-212ENST00000558911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.41□□□□□ -1.54
LRRC28-212ENST00000558911 KIF4AO95239 1232 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 ARL4DP49703 201 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 PIP4K2BP78356 416 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 JAG1P78504 1218 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 NUTM2GQ5VZR2 741 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 CEP120Q8N960 986 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 RGS22Q8NE09 1264 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 TRAIPQ9BWF2 469 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 USP26Q9BXU7 913 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 TMEM63CQ9P1W3 806 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 CCDC39Q9UFE4 941 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 MTMR7Q9Y216 660 aa5.4□□□□□ -1.54
LRRC28-212ENST00000558911 TNFRSF10BO14763 440 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 ZBTB39O15060 712 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 USP11P51784 963 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 CFAP70Q5T0N1 1121 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 ZNF438Q7Z4V0 828 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 HHIPQ96QV1 700 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 ADAM19Q9H013 955 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 ELP3Q9H9T3 547 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 OSGEPQ9NPF4 335 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 CNTN3Q9P232 1028 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 HIF3AQ9Y2N7 669 aa5.39□□□□□ -1.55
LRRC28-212ENST00000558911 FAM95CA0A1B0GW59 222 aa5.38□□□□□ -1.55
LRRC28-212ENST00000558911 CYP26A1O43174 497 aa5.38□□□□□ -1.55
LRRC28-212ENST00000558911 C8AP07357 584 aa5.38□□□□□ -1.55
LRRC28-212ENST00000558911 FOSL1P15407 271 aa5.38□□□□□ -1.55
LRRC28-212ENST00000558911 FBLIM1Q8WUP2 373 aa5.38□□□□□ -1.55
LRRC28-212ENST00000558911 NUDT16Q96DE0 195 aaKnown RBP5.38□□□□□ -1.55
LRRC28-212ENST00000558911 ASIC4Q96FT7 647 aa5.38□□□□□ -1.55
LRRC28-212ENST00000558911 PDE2AO00408 941 aaPredicted RBP5.37□□□□□ -1.55
LRRC28-212ENST00000558911 DRD2P14416 443 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 CES1P23141 567 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 C19orf57Q0VDD7 668 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 OCLNQ16625 522 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 ATCAYQ86WG3 371 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 C1orf127Q8N9H9 656 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 FLCNQ8NFG4 579 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 TBC1D32Q96NH3 1257 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 LRRC4CQ9HCJ2 640 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 STIM2Q9P246 746 aa5.37□□□□□ -1.55
LRRC28-212ENST00000558911 ZNF777Q9ULD5 760 aaPredicted RBP5.37□□□□□ -1.55
LRRC28-212ENST00000558911 A6NHS1 94 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 RBM25P49756 843 aaKnown RBP5.36□□□□□ -1.55
LRRC28-212ENST00000558911 MSMPQ1L6U9 139 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 SWI5Q1ZZU3 235 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 TMCO4Q5TGY1 634 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 CDPF1Q6NVV7 123 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 PAOXQ6QHF9 649 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 STK32AQ8WU08 396 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 WNT8BQ93098 351 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 ZNF428Q96B54 188 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 FBXL18Q96ME1 805 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 GZF1Q9H116 711 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-212ENST00000558911 CYP4F12Q9HCS2 524 aa5.36□□□□□ -1.55
LRRC28-212ENST00000558911 ACIN1Q9UKV3 1341 aaKnown RBP5.36□□□□□ -1.55
LRRC28-212ENST00000558911 SOX1O00570 391 aaPredicted RBP5.35□□□□□ -1.55
LRRC28-212ENST00000558911 ADMP35318 185 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 IKBKEQ14164 716 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 C8orf34Q49A92 452 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 VSIG10LQ86VR7 867 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 ABTB2Q8N961 1025 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 ASAP3Q8TDY4 903 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 DZANK1Q9NVP4 752 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 CXXC1Q9P0U4 656 aaPredicted RBP5.35□□□□□ -1.55
LRRC28-212ENST00000558911 SALL4Q9UJQ4 1053 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 ZMIZ1Q9ULJ6 1067 aa5.35□□□□□ -1.55
LRRC28-212ENST00000558911 FAM170BA6NMN3 283 aa5.34□□□□□ -1.55
LRRC28-212ENST00000558911 NFKBIEO00221 500 aa5.34□□□□□ -1.55
LRRC28-212ENST00000558911 DNM1Q05193 864 aaKnown RBP5.34□□□□□ -1.55
LRRC28-212ENST00000558911 ZNF648Q5T619 568 aaPredicted RBP5.34□□□□□ -1.55
LRRC28-212ENST00000558911 PDE12Q6L8Q7 609 aaKnown RBP5.34□□□□□ -1.55
LRRC28-212ENST00000558911 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
LRRC28-212ENST00000558911 EDEM1Q92611 657 aa5.34□□□□□ -1.55
LRRC28-212ENST00000558911 METTL22Q9BUU2 404 aaPredicted RBP5.34□□□□□ -1.55
LRRC28-212ENST00000558911 MEGF11A6BM72 1044 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 DLGAP3O95886 979 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 RAB6AP20340 208 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 MFAP1P55081 439 aaKnown RBP5.33□□□□□ -1.56
LRRC28-212ENST00000558911 ZNF124Q15973 351 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 NFXL1Q6ZNB6 911 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 CBLL1Q75N03 491 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 OSMRQ99650 979 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 BSDC1Q9NW68 430 aaPredicted RBP5.33□□□□□ -1.56
LRRC28-212ENST00000558911 SOX13Q9UN79 622 aa5.33□□□□□ -1.56
LRRC28-212ENST00000558911 LOC100289279A0A1B0GTE1 492 aa5.32□□□□□ -1.56
LRRC28-212ENST00000558911 GSTM4Q03013 218 aa5.32□□□□□ -1.56
LRRC28-212ENST00000558911 FAM69CQ0P6D2 419 aa5.32□□□□□ -1.56
LRRC28-212ENST00000558911 COL19A1Q14993 1142 aa5.32□□□□□ -1.56
LRRC28-212ENST00000558911 POU5F2Q8N7G0 328 aa5.32□□□□□ -1.56
LRRC28-212ENST00000558911 SMG8Q8ND04 991 aaKnown RBP5.32□□□□□ -1.56
LRRC28-212ENST00000558911 TMPRSS13Q9BYE2 586 aa5.32□□□□□ -1.56
LRRC28-212ENST00000558911 TIAF1O95411 115 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 PRNPP04156 253 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 PCSK2P16519 638 aa5.31□□□□□ -1.56
LRRC28-212ENST00000558911 JUNBP17275 347 aaPredicted RBP5.31□□□□□ -1.56
LRRC28-212ENST00000558911 EXOSC6Q5RKV6 272 aaKnown RBP5.31□□□□□ -1.56
LRRC28-212ENST00000558911 DUSP27Q5VZP5 1158 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms