RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 NKX2-3Q8TAU0 364 aa11.38□□□□□ -0.59
RORA-208ENST00000558904 DPF3Q92784 378 aa11.38□□□□□ -0.59
RORA-208ENST00000558904 ZBED3Q96IU2 234 aaPredicted RBP11.38□□□□□ -0.59
RORA-208ENST00000558904 MINPP1Q9UNW1 487 aa11.38□□□□□ -0.59
RORA-208ENST00000558904 TMPOP42166 694 aaKnown RBP11.37□□□□□ -0.59
RORA-208ENST00000558904 KIAA0825Q8IV33 1275 aa11.37□□□□□ -0.59
RORA-208ENST00000558904 HTATIP2Q9BUP3 242 aa11.37□□□□□ -0.59
RORA-208ENST00000558904 CWC25Q9NXE8 425 aaPredicted RBP11.37□□□□□ -0.59
RORA-208ENST00000558904 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
RORA-208ENST00000558904 NR2E3Q9Y5X4 410 aa11.37□□□□□ -0.59
RORA-208ENST00000558904 A0A1W2PPC1 479 aa11.36□□□□□ -0.59
RORA-208ENST00000558904 CLMNQ96JQ2 1002 aa11.36□□□□□ -0.59
RORA-208ENST00000558904 MXD3Q9BW11 206 aa11.36□□□□□ -0.59
RORA-208ENST00000558904 ANKRD2Q9GZV1 360 aa11.36□□□□□ -0.59
RORA-208ENST00000558904 PTCH2Q9Y6C5 1203 aa11.36□□□□□ -0.59
RORA-208ENST00000558904 ZNF804BA4D1E1 1349 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 USP2O75604 605 aaPredicted RBP11.35□□□□□ -0.59
RORA-208ENST00000558904 DDX58O95786 925 aaKnown RBP11.35□□□□□ -0.59
RORA-208ENST00000558904 CAPN2P17655 700 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
RORA-208ENST00000558904 GTF2A2P52657 109 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 GTF2IP78347 998 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 TNFAIP1Q13829 316 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 TAF1CQ15572 869 aaPredicted RBP11.35□□□□□ -0.59
RORA-208ENST00000558904 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
RORA-208ENST00000558904 MYD88Q99836 296 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 PTPN18Q99952 460 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
RORA-208ENST00000558904 LAS1LQ9Y4W2 734 aaKnown RBP11.35□□□□□ -0.59
RORA-208ENST00000558904 TRIOBPQ9H2D6 2365 aa11.35□□□□□ -0.59
RORA-208ENST00000558904 CENPFP49454 3210 aa11.34□□□□□ -0.59
RORA-208ENST00000558904 IGHMBP2P38935 993 aaKnown RBP11.34□□□□□ -0.59
RORA-208ENST00000558904 HELBQ8NG08 1087 aaPredicted RBP11.34□□□□□ -0.59
RORA-208ENST00000558904 FZD1Q9UP38 647 aa11.34□□□□□ -0.59
RORA-208ENST00000558904 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
RORA-208ENST00000558904 HTTP42858 3142 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 COL4A1P02462 1669 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 HOXD10P28358 340 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 CTSWP56202 376 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 FKBP1AP62942 108 aaKnown RBP11.33□□□□□ -0.6
RORA-208ENST00000558904 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 TTLL11Q8NHH1 800 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 OPTNQ96CV9 577 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 METTL22Q9BUU2 404 aaPredicted RBP11.33□□□□□ -0.6
RORA-208ENST00000558904 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
RORA-208ENST00000558904 LAMB1P07942 1786 aa11.33□□□□□ -0.6
RORA-208ENST00000558904 CCL15-CCL14A0A0B4J2E2 113 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 TLR2O60603 784 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 GJA5P36382 358 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 KCNJ4P48050 445 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 CCL15Q16663 113 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 NBPF12Q5TAG4 269 aaPredicted RBP11.32□□□□□ -0.6
RORA-208ENST00000558904 MPHOSPH8Q99549 860 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 VEZTQ9HBM0 779 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 CEP290O15078 2479 aa11.32□□□□□ -0.6
RORA-208ENST00000558904 WTIPA6NIX2 430 aaPredicted RBP11.31□□□□□ -0.6
RORA-208ENST00000558904 MYCP01106 439 aaPredicted RBP11.31□□□□□ -0.6
RORA-208ENST00000558904 RASA3Q14644 834 aa11.31□□□□□ -0.6
RORA-208ENST00000558904 NEUROD2Q15784 382 aa11.31□□□□□ -0.6
RORA-208ENST00000558904 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
RORA-208ENST00000558904 TXNRD3Q86VQ6 643 aa11.31□□□□□ -0.6
RORA-208ENST00000558904 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
RORA-208ENST00000558904 ELP3Q9H9T3 547 aa11.31□□□□□ -0.6
RORA-208ENST00000558904 CSADQ9Y600 493 aa11.31□□□□□ -0.6
RORA-208ENST00000558904 GJB1P08034 283 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 CETPP11597 493 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 GJA8P48165 433 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 TNNI2P48788 182 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 RBM5P52756 815 aaKnown RBP eCLIP11.3□□□□□ -0.6
RORA-208ENST00000558904 MAP3K9P80192 1104 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 LACTBP83111 547 aaPredicted RBP11.3□□□□□ -0.6
RORA-208ENST00000558904 NEXNQ0ZGT2 675 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 BRI3BPQ8WY22 251 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 PRMT6Q96LA8 375 aaPredicted RBP11.3□□□□□ -0.6
RORA-208ENST00000558904 PRO3102Q9H379 93 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 GREM2Q9H772 168 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
RORA-208ENST00000558904 BRCA2P51587 3418 aa11.3□□□□□ -0.6
RORA-208ENST00000558904 CLRN2A0PK11 232 aa11.29□□□□□ -0.6
RORA-208ENST00000558904 UBXN2AP68543 259 aa11.29□□□□□ -0.6
RORA-208ENST00000558904 CAP1Q01518 475 aa11.29□□□□□ -0.6
RORA-208ENST00000558904 C15orf52Q6ZUT6 534 aaKnown RBP11.29□□□□□ -0.6
RORA-208ENST00000558904 JARID2Q92833 1246 aaPredicted RBP11.29□□□□□ -0.6
RORA-208ENST00000558904 TRIM47Q96LD4 638 aa11.29□□□□□ -0.6
RORA-208ENST00000558904 SZT2Q5T011 3432 aa11.29□□□□□ -0.6
RORA-208ENST00000558904 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
RORA-208ENST00000558904 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.28□□□□□ -0.6
RORA-208ENST00000558904 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
RORA-208ENST00000558904 FAM43AQ8N2R8 423 aa11.28□□□□□ -0.6
RORA-208ENST00000558904 RAET1EQ8TD07 263 aa11.28□□□□□ -0.6
RORA-208ENST00000558904 HOOK2Q96ED9 719 aa11.28□□□□□ -0.6
RORA-208ENST00000558904 SRRDQ9UH36 339 aa11.28□□□□□ -0.6
RORA-208ENST00000558904 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
RORA-208ENST00000558904 F8W031 263 aaPredicted RBP11.27□□□□□ -0.61
RORA-208ENST00000558904 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms