RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-206ENST00000558880 C4AP0C0L4 1744 aa9.21□□□□□ -0.94
TRAF3-206ENST00000558880 A0A087WZG4 1122 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 NEURL1BA8MQ27 555 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 PDE3AQ14432 1141 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 SUSD4Q5VX71 490 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 CLEC4GQ6UXB4 293 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 NLRP10Q86W26 655 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 MYD88Q99836 296 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 API5Q9BZZ5 524 aaKnown RBP9.2□□□□□ -0.94
TRAF3-206ENST00000558880 USP44Q9H0E7 712 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 UTYO14607 1347 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 PXDNLA1KZ92 1463 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 SCN7AQ01118 1682 aa9.2□□□□□ -0.94
TRAF3-206ENST00000558880 H7C1W4 665 aa9.19□□□□□ -0.94
TRAF3-206ENST00000558880 POLRMTO00411 1230 aaKnown RBP9.19□□□□□ -0.94
TRAF3-206ENST00000558880 ZBTB7BO15156 539 aaPredicted RBP9.19□□□□□ -0.94
TRAF3-206ENST00000558880 NTSR2O95665 410 aa9.19□□□□□ -0.94
TRAF3-206ENST00000558880 RFC4P35249 363 aa9.19□□□□□ -0.94
TRAF3-206ENST00000558880 DZIP1LQ8IYY4 767 aaKnown RBP9.19□□□□□ -0.94
TRAF3-206ENST00000558880 FLAD1Q8NFF5 587 aa9.19□□□□□ -0.94
TRAF3-206ENST00000558880 LINS1Q8NG48 757 aa9.19□□□□□ -0.94
TRAF3-206ENST00000558880 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
TRAF3-206ENST00000558880 BCORQ6W2J9 1755 aa9.19□□□□□ -0.94
TRAF3-206ENST00000558880 NBPF7P0C2Y1 421 aaPredicted RBP9.18□□□□□ -0.94
TRAF3-206ENST00000558880 HSPA1AP0DMV8 641 aaKnown RBP9.18□□□□□ -0.94
TRAF3-206ENST00000558880 HSPA1BP0DMV9 641 aaKnown RBP9.18□□□□□ -0.94
TRAF3-206ENST00000558880 GPTP24298 496 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 SLC19A1P41440 591 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 MTMR2Q13614 643 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 GCKRQ14397 625 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 QPCTQ16769 361 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 EPHA10Q5JZY3 1008 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 KIF6Q6ZMV9 814 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 LIAT1Q6ZQX7 453 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 JARID2Q92833 1246 aaPredicted RBP9.18□□□□□ -0.94
TRAF3-206ENST00000558880 MEIS3Q99687 375 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
TRAF3-206ENST00000558880 CARMIL3Q8ND23 1372 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 ABCC12Q96J65 1359 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 IPO8O15397 1037 aaKnown RBP9.17□□□□□ -0.94
TRAF3-206ENST00000558880 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 DXOO77932 396 aaKnown RBP9.17□□□□□ -0.94
TRAF3-206ENST00000558880 DDX58O95786 925 aaKnown RBP9.17□□□□□ -0.94
TRAF3-206ENST00000558880 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
TRAF3-206ENST00000558880 MMP16P51512 607 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 MVPQ14764 893 aaKnown RBP9.17□□□□□ -0.94
TRAF3-206ENST00000558880 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 IL27Q8NEV9 243 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 PRR7Q8TB68 274 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 CRBNQ96SW2 442 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 NIP7Q9Y221 180 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRAF3-206ENST00000558880 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
TRAF3-206ENST00000558880 JUNDP17535 347 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 HMGB2P26583 209 aaKnown RBP9.16□□□□□ -0.94
TRAF3-206ENST00000558880 GJA5P36382 358 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 IRX6P78412 446 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-206ENST00000558880 PRR5LQ6MZQ0 368 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 BICDL1Q6ZP65 573 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 CCDC191Q8NCU4 936 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 EXOC6Q8TAG9 804 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 ZBTB40Q9NUA8 1239 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 BCS1LQ9Y276 419 aa9.16□□□□□ -0.94
TRAF3-206ENST00000558880 V9GY48 417 aaPredicted RBP9.16□□□□□ -0.94
TRAF3-206ENST00000558880 GRM8O00222 908 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 SERPINB2P05120 415 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 PCCAP05165 728 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-206ENST00000558880 CENPBP07199 599 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-206ENST00000558880 MMP10P09238 476 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 CCT4P50991 539 aaKnown RBP9.15□□□□□ -0.94
TRAF3-206ENST00000558880 FOXO4P98177 505 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 HSP90AB3PQ58FF7 597 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 SLC10A5Q5PT55 438 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 SIRT2Q8IXJ6 389 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 NLGN1Q8N2Q7 840 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 ANKRD44Q8N8A2 993 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 FAM89AQ96GI7 184 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 SUCLG2Q96I99 432 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 CWC25Q9NXE8 425 aaPredicted RBP9.15□□□□□ -0.94
TRAF3-206ENST00000558880 COL4A1P02462 1669 aa9.15□□□□□ -0.94
TRAF3-206ENST00000558880 KLRG2A4D1S0 409 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-206ENST00000558880 CFAP99D6REC4 459 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 FSTL1Q12841 308 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 ERFEQ4G0M1 354 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 PARP10Q53GL7 1025 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 SLC51AQ86UW1 340 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 ZBTB38Q8NAP3 1195 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-206ENST00000558880 PROCA1Q8NCQ7 364 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-206ENST00000558880 TSC1Q92574 1164 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 PLA2G12BQ9BX93 195 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 NRXN2Q9P2S2 1712 aa9.14□□□□□ -0.95
TRAF3-206ENST00000558880 CACNA1FO60840 1977 aa9.13□□□□□ -0.95
TRAF3-206ENST00000558880 PCNTO95613 3336 aa9.13□□□□□ -0.95
TRAF3-206ENST00000558880 CDHR2Q9BYE9 1310 aa9.13□□□□□ -0.95
TRAF3-206ENST00000558880 NUP98P52948 1817 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms