RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CCDC57Q2TAC2 916 aa17.16■□□□□ 0.34
VPS18-203ENST00000558855 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
VPS18-203ENST00000558855 F8W031 263 aaPredicted RBP17.15■□□□□ 0.34
VPS18-203ENST00000558855 GYG1P46976 350 aa17.15■□□□□ 0.34
VPS18-203ENST00000558855 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
VPS18-203ENST00000558855 LRRC24Q50LG9 513 aa17.15■□□□□ 0.34
VPS18-203ENST00000558855 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
VPS18-203ENST00000558855 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
VPS18-203ENST00000558855 E9PSI1 815 aa17.14■□□□□ 0.33
VPS18-203ENST00000558855 GRIK5Q16478 980 aa17.14■□□□□ 0.33
VPS18-203ENST00000558855 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
VPS18-203ENST00000558855 OGFOD1Q8N543 542 aa17.14■□□□□ 0.33
VPS18-203ENST00000558855 RNF186Q9NXI6 227 aa17.14■□□□□ 0.33
VPS18-203ENST00000558855 RIPOR2Q9Y4F9 1068 aa17.14■□□□□ 0.33
VPS18-203ENST00000558855 PRKG1Q13976 671 aa17.13■□□□□ 0.33
VPS18-203ENST00000558855 TAF7LQ5H9L4 462 aa17.13■□□□□ 0.33
VPS18-203ENST00000558855 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
VPS18-203ENST00000558855 CCDC102AQ96A19 550 aa17.13■□□□□ 0.33
VPS18-203ENST00000558855 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
VPS18-203ENST00000558855 CLRN2A0PK11 232 aa17.12■□□□□ 0.33
VPS18-203ENST00000558855 CA12O43570 354 aa17.12■□□□□ 0.33
VPS18-203ENST00000558855 TRPA1O75762 1119 aa17.12■□□□□ 0.33
VPS18-203ENST00000558855 VGLL2Q8N8G2 317 aa17.12■□□□□ 0.33
VPS18-203ENST00000558855 TDRD7Q8NHU6 1098 aaKnown RBP17.12■□□□□ 0.33
VPS18-203ENST00000558855 FAM84BQ96KN1 310 aaPredicted RBP17.12■□□□□ 0.33
VPS18-203ENST00000558855 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
VPS18-203ENST00000558855 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
VPS18-203ENST00000558855 MKRN3Q13064 507 aaKnown RBP17.11■□□□□ 0.33
VPS18-203ENST00000558855 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
VPS18-203ENST00000558855 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
VPS18-203ENST00000558855 PTPRCP08575 1304 aa17.11■□□□□ 0.33
VPS18-203ENST00000558855 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
VPS18-203ENST00000558855 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
VPS18-203ENST00000558855 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
VPS18-203ENST00000558855 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
VPS18-203ENST00000558855 RFX5P48382 616 aaPredicted RBP17.1■□□□□ 0.33
VPS18-203ENST00000558855 FKBP1BP68106 108 aa17.1■□□□□ 0.33
VPS18-203ENST00000558855 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
VPS18-203ENST00000558855 CDAN1Q8IWY9 1227 aa17.1■□□□□ 0.33
VPS18-203ENST00000558855 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
VPS18-203ENST00000558855 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
VPS18-203ENST00000558855 FKBP1AP62942 108 aaKnown RBP17.09■□□□□ 0.33
VPS18-203ENST00000558855 UBE4AQ14139 1066 aa17.09■□□□□ 0.33
VPS18-203ENST00000558855 DLGAP5Q15398 846 aa17.09■□□□□ 0.33
VPS18-203ENST00000558855 APOBEC3FQ8IUX4 373 aaKnown RBP17.09■□□□□ 0.33
VPS18-203ENST00000558855 DGKZQ13574 1117 aa17.08■□□□□ 0.32
VPS18-203ENST00000558855 TTLL12Q14166 644 aaPredicted RBP17.08■□□□□ 0.32
VPS18-203ENST00000558855 DEFB129Q9H1M3 183 aa17.08■□□□□ 0.32
VPS18-203ENST00000558855 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
VPS18-203ENST00000558855 SAGE1Q9NXZ1 904 aa17.08■□□□□ 0.32
VPS18-203ENST00000558855 TNRC18O15417 2968 aaPredicted RBP17.08■□□□□ 0.32
VPS18-203ENST00000558855 HIBADHP31937 336 aaKnown RBP17.07■□□□□ 0.32
VPS18-203ENST00000558855 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
VPS18-203ENST00000558855 LDLRAD1Q5T700 205 aa17.07■□□□□ 0.32
VPS18-203ENST00000558855 FBXO33Q7Z6M2 555 aa17.07■□□□□ 0.32
VPS18-203ENST00000558855 CLMNQ96JQ2 1002 aa17.07■□□□□ 0.32
VPS18-203ENST00000558855 R3HDMLQ9H3Y0 253 aa17.07■□□□□ 0.32
VPS18-203ENST00000558855 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
VPS18-203ENST00000558855 MROH5Q6ZUA9 1318 aa17.06■□□□□ 0.32
VPS18-203ENST00000558855 CCDC85CA6NKD9 419 aa17.06■□□□□ 0.32
VPS18-203ENST00000558855 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
VPS18-203ENST00000558855 METTL24Q5JXM2 366 aa17.06■□□□□ 0.32
VPS18-203ENST00000558855 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
VPS18-203ENST00000558855 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
VPS18-203ENST00000558855 TNNQ9UQP3 1299 aa17.06■□□□□ 0.32
VPS18-203ENST00000558855 PDE8BO95263 885 aa17.05■□□□□ 0.32
VPS18-203ENST00000558855 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
VPS18-203ENST00000558855 FGFR2P21802 821 aa17.05■□□□□ 0.32
VPS18-203ENST00000558855 BCAMP50895 628 aa17.05■□□□□ 0.32
VPS18-203ENST00000558855 TDRD3Q9H7E2 651 aaKnown RBP17.05■□□□□ 0.32
VPS18-203ENST00000558855 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
VPS18-203ENST00000558855 NOB1Q9ULX3 412 aaKnown RBP17.05■□□□□ 0.32
VPS18-203ENST00000558855 GJA5P36382 358 aa17.04■□□□□ 0.32
VPS18-203ENST00000558855 MMP14P50281 582 aa17.04■□□□□ 0.32
VPS18-203ENST00000558855 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
VPS18-203ENST00000558855 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
VPS18-203ENST00000558855 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
VPS18-203ENST00000558855 NF2P35240 595 aa17.03■□□□□ 0.32
VPS18-203ENST00000558855 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
VPS18-203ENST00000558855 RASA3Q14644 834 aa17.03■□□□□ 0.32
VPS18-203ENST00000558855 MAP3K11Q16584 847 aa17.03■□□□□ 0.32
VPS18-203ENST00000558855 SPDYE2Q495Y8 402 aa17.03■□□□□ 0.32
VPS18-203ENST00000558855 SPRYD7Q5W111 196 aa17.03■□□□□ 0.32
VPS18-203ENST00000558855 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
VPS18-203ENST00000558855 CCER2I3L3R5 266 aa17.02■□□□□ 0.32
VPS18-203ENST00000558855 CRKP46108 304 aa17.02■□□□□ 0.32
VPS18-203ENST00000558855 TM4SF4P48230 202 aa17.02■□□□□ 0.32
VPS18-203ENST00000558855 CACNB3P54284 484 aa17.02■□□□□ 0.32
VPS18-203ENST00000558855 ARMC9Q7Z3E5 817 aa17.02■□□□□ 0.32
VPS18-203ENST00000558855 TEPSINQ96N21 525 aa17.02■□□□□ 0.32
VPS18-203ENST00000558855 ZSWIM8A7E2V4 1837 aa17.02■□□□□ 0.31
VPS18-203ENST00000558855 EYA2O00167 538 aa17.01■□□□□ 0.31
VPS18-203ENST00000558855 USP2O75604 605 aaPredicted RBP17.01■□□□□ 0.31
VPS18-203ENST00000558855 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
VPS18-203ENST00000558855 MEIS3Q99687 375 aa17.01■□□□□ 0.31
VPS18-203ENST00000558855 PA2G4Q9UQ80 394 aaKnown RBP17.01■□□□□ 0.31
VPS18-203ENST00000558855 HTTP42858 3142 aa17.01■□□□□ 0.31
VPS18-203ENST00000558855 TCP10L2B9ZVM9 353 aa17■□□□□ 0.31
VPS18-203ENST00000558855 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
VPS18-203ENST00000558855 ZNF296Q8WUU4 475 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms