RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 RPGRIP1LQ68CZ1 1315 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 CTIFO43310 598 aaKnown RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 SLMAPQ14BN4 828 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 N4BP2L2Q92802 583 aaPredicted RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 TSG101Q99816 390 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 DNAJC25Q9H1X3 360 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 TSPYL4Q9UJ04 414 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 ZDHHC9Q9Y397 364 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 MACROD2A1Z1Q3 448 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 CSB-PGBD3P0DP91 1061 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 KANK3Q6NY19 840 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 APBB1IPQ7Z5R6 666 aaPredicted RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 LRRC43Q8N309 656 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 SMARCC2Q8TAQ2 1214 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 ARHGEF2Q92974 986 aaKnown RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 MBIPQ9NS73 344 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 ATP5DP30049 168 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 CBX8Q9HC52 389 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 TFIP11Q9UBB9 837 aaKnown RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 RTEL1-TNFRSF6BF6WH68 1400 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 NUTM2DQ5VT03 806 aaPredicted RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 GSDMBQ8TAX9 411 aa10.92□□□□□ -0.66
TRPM1-208ENST00000558768 PHAXQ9H814 394 aaKnown RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 MTRF1LQ9UGC7 380 aaKnown RBP10.92□□□□□ -0.66
TRPM1-208ENST00000558768 GOLGA6BA6NDN3 693 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 BIN1O00499 593 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 ATP2A1O14983 1001 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 ATP2A2P16615 1042 aaKnown RBP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 CHMLP26374 656 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 CWC27Q6UX04 472 aaKnown RBP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 RAD50Q92878 1312 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 TXNDC9O14530 226 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 PRPHP41219 470 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 MTIF2P46199 727 aaKnown RBP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 TNNC1P63316 161 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 IRX1P78414 480 aaPredicted RBP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 BRD3Q15059 726 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 ZBTB9Q96C00 473 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 MPHOSPH8Q99549 860 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 KIF24Q5T7B8 1368 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 LRMPQ12912 555 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 PPP1R7Q15435 360 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 CCDC102BQ68D86 513 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 OTUD7AQ8TE49 926 aaPredicted RBP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 TSNARE1Q96NA8 513 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 KCNG1Q9UIX4 513 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 TRPM1Q7Z4N2 1603 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 URB2Q14146 1524 aaKnown RBP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 RAB11FIP3O75154 756 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 SATB1Q01826 763 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 TMEM87AQ8NBN3 555 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 BCAS4Q8TDM0 211 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 CARD6Q9BX69 1037 aa10.91□□□□□ -0.66
TRPM1-208ENST00000558768 XAB2Q9HCS7 855 aaKnown RBP10.91□□□□□ -0.66
TRPM1-208ENST00000558768 ATP8B1O43520 1251 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 CTNNA2P26232 953 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 ACTN2P35609 894 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 TRIM68Q6AZZ1 485 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 ABTB1Q969K4 478 aaPredicted RBP10.9□□□□□ -0.66
TRPM1-208ENST00000558768 TSC22D3Q99576 134 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 HPDP32754 393 aaPredicted RBP10.9□□□□□ -0.66
TRPM1-208ENST00000558768 ZNF569Q5MCW4 686 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 FAM43BQ6ZT52 329 aaPredicted RBP10.9□□□□□ -0.66
TRPM1-208ENST00000558768 LARP6Q9BRS8 491 aaKnown RBP10.9□□□□□ -0.66
TRPM1-208ENST00000558768 IL1RAPL2Q9NP60 686 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 ELP1O95163 1332 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 E9PCH4 1651 aa10.9□□□□□ -0.66
TRPM1-208ENST00000558768 UIMC1Q96RL1 719 aa10.9□□□□□ -0.67
TRPM1-208ENST00000558768 AK2P54819 239 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 VPS52Q8N1B4 723 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 GPR161Q8N6U8 529 aaKnown RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 C8orf76Q96K31 380 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 RAB3IPQ96QF0 476 aaPredicted RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 MEIS3Q99687 375 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 JPH2Q9BR39 696 aaPredicted RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 KCNK9Q9NPC2 374 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 MED4Q9NPJ6 270 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 MTUS1Q9ULD2 1270 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 MYO1BO43795 1136 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 TRIM21P19474 475 aaKnown RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 HNRNPH2P55795 449 aaKnown RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 VPS37DQ86XT2 251 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 PYM1Q9BRP8 204 aaKnown RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 ZSCAN16Q9H4T2 348 aaPredicted RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 TRAPPC8Q9Y2L5 1435 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 FRMD3A2A2Y4 597 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 SMIM23A6NLE4 172 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 SLFN14P0C7P3 912 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 MAGEA9P43362 315 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 PRPF40BQ6NWY9 871 aaKnown RBP10.89□□□□□ -0.67
TRPM1-208ENST00000558768 TSPYL6Q8N831 410 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 PPP1R9AQ9ULJ8 1098 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 ABCC4O15439 1325 aa10.89□□□□□ -0.67
TRPM1-208ENST00000558768 OPHN1O60890 802 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms