RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 ACAD11Q709F0 780 aa9.08□□□□□ -0.96
COPS2-204ENST00000558545 CCNJLQ8IV13 435 aa9.08□□□□□ -0.96
COPS2-204ENST00000558545 AGGF1Q8N302 714 aaeCLIP9.08□□□□□ -0.96
COPS2-204ENST00000558545 C19orf57Q0VDD7 668 aa9.07□□□□□ -0.96
COPS2-204ENST00000558545 DUOXA2Q1HG44 320 aa9.07□□□□□ -0.96
COPS2-204ENST00000558545 USPL1Q5W0Q7 1092 aa9.07□□□□□ -0.96
COPS2-204ENST00000558545 PRR23CQ6ZRP0 262 aa9.07□□□□□ -0.96
COPS2-204ENST00000558545 TCF12Q99081 682 aa9.07□□□□□ -0.96
COPS2-204ENST00000558545 SOX1O00570 391 aaPredicted RBP9.06□□□□□ -0.96
COPS2-204ENST00000558545 DDX3YO15523 660 aaKnown RBP9.06□□□□□ -0.96
COPS2-204ENST00000558545 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
COPS2-204ENST00000558545 GLB1P16278 677 aa9.06□□□□□ -0.96
COPS2-204ENST00000558545 KCNA1Q09470 495 aa9.06□□□□□ -0.96
COPS2-204ENST00000558545 ORC1Q13415 861 aa9.06□□□□□ -0.96
COPS2-204ENST00000558545 IKBKEQ14164 716 aa9.06□□□□□ -0.96
COPS2-204ENST00000558545 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
COPS2-204ENST00000558545 CEP41Q9BYV8 373 aa9.06□□□□□ -0.96
COPS2-204ENST00000558545 ESRRAP11474 423 aaPredicted RBP9.05□□□□□ -0.96
COPS2-204ENST00000558545 ASAP3Q8TDY4 903 aa9.05□□□□□ -0.96
COPS2-204ENST00000558545 UBASH3BQ8TF42 649 aa9.05□□□□□ -0.96
COPS2-204ENST00000558545 SLC7A3Q8WY07 619 aa9.05□□□□□ -0.96
COPS2-204ENST00000558545 UBL7Q96S82 380 aaPredicted RBP9.05□□□□□ -0.96
COPS2-204ENST00000558545 LIN7BQ9HAP6 207 aa9.05□□□□□ -0.96
COPS2-204ENST00000558545 DCTN4Q9UJW0 460 aa9.05□□□□□ -0.96
COPS2-204ENST00000558545 EIF1AYO14602 144 aaKnown RBP9.04□□□□□ -0.96
COPS2-204ENST00000558545 SLC51AQ86UW1 340 aa9.04□□□□□ -0.96
COPS2-204ENST00000558545 TMC1Q8TDI8 760 aa9.04□□□□□ -0.96
COPS2-204ENST00000558545 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
COPS2-204ENST00000558545 NIF3L1Q9GZT8 377 aa9.04□□□□□ -0.96
COPS2-204ENST00000558545 A0A096LPE4 126 aa9.03□□□□□ -0.96
COPS2-204ENST00000558545 A0A1W2PPZ6 126 aa9.03□□□□□ -0.96
COPS2-204ENST00000558545 MEGF11A6BM72 1044 aa9.03□□□□□ -0.96
COPS2-204ENST00000558545 METTL12A8MUP2 240 aa9.03□□□□□ -0.96
COPS2-204ENST00000558545 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
COPS2-204ENST00000558545 FAM46AQ96IP4 442 aaKnown RBP9.03□□□□□ -0.96
COPS2-204ENST00000558545 RNF208Q9H0X6 261 aa9.03□□□□□ -0.96
COPS2-204ENST00000558545 GRIA4P48058 902 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 NLRP12P59046 1061 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 PTPN12Q05209 780 aaKnown RBP9.02□□□□□ -0.97
COPS2-204ENST00000558545 ZMYM1Q5SVZ6 1142 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 ANKRD34AQ69YU3 496 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 TMC7Q7Z402 723 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 CCDC74AQ96AQ1 378 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 CSRNP1Q96S65 589 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 CLEC4MQ9H2X3 399 aaPredicted RBP9.02□□□□□ -0.97
COPS2-204ENST00000558545 NPHS2Q9NP85 383 aa9.02□□□□□ -0.97
COPS2-204ENST00000558545 BIN2Q9UBW5 565 aaPredicted RBP9.02□□□□□ -0.97
COPS2-204ENST00000558545 ITPKAP23677 461 aa9.01□□□□□ -0.97
COPS2-204ENST00000558545 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
COPS2-204ENST00000558545 ARMC10Q8N2F6 343 aa9.01□□□□□ -0.97
COPS2-204ENST00000558545 RUSC1Q9BVN2 902 aa9□□□□□ -0.97
COPS2-204ENST00000558545 NRSN2Q9GZP1 204 aa9□□□□□ -0.97
COPS2-204ENST00000558545 EHD4Q9H223 541 aa9□□□□□ -0.97
COPS2-204ENST00000558545 IVNS1ABPQ9Y6Y0 642 aa9□□□□□ -0.97
COPS2-204ENST00000558545 LOC100289279A0A1B0GTE1 492 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 DHX15O43143 795 aaKnown RBP8.99□□□□□ -0.97
COPS2-204ENST00000558545 PCDH1Q08174 1060 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 DSC3Q14574 896 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 SPRED3Q2MJR0 410 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 XP32Q5T750 250 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 Q8N3U1 123 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 MYRFLQ96LU7 910 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 TMPRSS13Q9BYE2 586 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 RAXQ9Y2V3 346 aa8.99□□□□□ -0.97
COPS2-204ENST00000558545 PATL2C9JE40 543 aaKnown RBP8.98□□□□□ -0.97
COPS2-204ENST00000558545 TREHO43280 583 aa8.98□□□□□ -0.97
COPS2-204ENST00000558545 ZNF423Q2M1K9 1284 aa8.98□□□□□ -0.97
COPS2-204ENST00000558545 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.98□□□□□ -0.97
COPS2-204ENST00000558545 ZNF576Q9H609 170 aa8.98□□□□□ -0.97
COPS2-204ENST00000558545 SUGCTQ9HAC7 445 aa8.98□□□□□ -0.97
COPS2-204ENST00000558545 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
COPS2-204ENST00000558545 TRAK1Q9UPV9 953 aa8.98□□□□□ -0.97
COPS2-204ENST00000558545 B3GALT4O96024 378 aa8.97□□□□□ -0.97
COPS2-204ENST00000558545 FSTP19883 344 aa8.97□□□□□ -0.97
COPS2-204ENST00000558545 MAPK1P28482 360 aa8.97□□□□□ -0.97
COPS2-204ENST00000558545 SMG8Q8ND04 991 aaKnown RBP8.97□□□□□ -0.97
COPS2-204ENST00000558545 UTP4Q969X6 686 aaKnown RBP8.97□□□□□ -0.97
COPS2-204ENST00000558545 HIF3AQ9Y2N7 669 aa8.97□□□□□ -0.97
COPS2-204ENST00000558545 GSC2O15499 205 aa8.96□□□□□ -0.98
COPS2-204ENST00000558545 GSTM4Q03013 218 aa8.96□□□□□ -0.98
COPS2-204ENST00000558545 RPS26P11Q5JNZ5 115 aaPredicted RBP8.96□□□□□ -0.98
COPS2-204ENST00000558545 FDX2Q6P4F2 183 aa8.96□□□□□ -0.98
COPS2-204ENST00000558545 GLIS3Q8NEA6 775 aa8.96□□□□□ -0.98
COPS2-204ENST00000558545 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
COPS2-204ENST00000558545 TIAF1O95411 115 aa8.95□□□□□ -0.98
COPS2-204ENST00000558545 DLGAP3O95886 979 aa8.95□□□□□ -0.98
COPS2-204ENST00000558545 PREPP48147 710 aa8.95□□□□□ -0.98
COPS2-204ENST00000558545 EXOSC6Q5RKV6 272 aaKnown RBP8.95□□□□□ -0.98
COPS2-204ENST00000558545 USP26Q9BXU7 913 aa8.95□□□□□ -0.98
COPS2-204ENST00000558545 STOML1Q9UBI4 398 aa8.95□□□□□ -0.98
COPS2-204ENST00000558545 RNF112Q9ULX5 631 aa8.95□□□□□ -0.98
COPS2-204ENST00000558545 SART1O43290 800 aaKnown RBP8.94□□□□□ -0.98
COPS2-204ENST00000558545 GADD45BO75293 160 aaPredicted RBP8.94□□□□□ -0.98
COPS2-204ENST00000558545 CYP11A1P05108 521 aa8.94□□□□□ -0.98
COPS2-204ENST00000558545 PLCB3Q01970 1234 aa8.94□□□□□ -0.98
COPS2-204ENST00000558545 GRM2Q14416 872 aa8.94□□□□□ -0.98
COPS2-204ENST00000558545 ENOX2Q16206 610 aaKnown RBP8.94□□□□□ -0.98
COPS2-204ENST00000558545 NUTM2GQ5VZR2 741 aa8.94□□□□□ -0.98
COPS2-204ENST00000558545 FAM20CQ8IXL6 584 aa8.94□□□□□ -0.98
COPS2-204ENST00000558545 DDX54Q8TDD1 881 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms