RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
SMAD3-205ENST00000558428 ADORA1P30542 326 aa15.26■□□□□ 0.03
SMAD3-205ENST00000558428 TBC1D10BQ4KMP7 808 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-205ENST00000558428 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
SMAD3-205ENST00000558428 SIRT2Q8IXJ6 389 aa15.26■□□□□ 0.03
SMAD3-205ENST00000558428 CRBNQ96SW2 442 aa15.26■□□□□ 0.03
SMAD3-205ENST00000558428 EXOC6BQ9Y2D4 811 aa15.26■□□□□ 0.03
SMAD3-205ENST00000558428 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
SMAD3-205ENST00000558428 FAM205AQ6ZU69 1335 aa15.25■□□□□ 0.03
SMAD3-205ENST00000558428 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
SMAD3-205ENST00000558428 KIF4BQ2VIQ3 1234 aa15.25■□□□□ 0.03
SMAD3-205ENST00000558428 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
SMAD3-205ENST00000558428 OGFOD1Q8N543 542 aa15.25■□□□□ 0.03
SMAD3-205ENST00000558428 CERS5Q8N5B7 392 aa15.25■□□□□ 0.03
SMAD3-205ENST00000558428 NEUROD6Q96NK8 337 aa15.25■□□□□ 0.03
SMAD3-205ENST00000558428 POLR2AP24928 1970 aaKnown RBP15.25■□□□□ 0.03
SMAD3-205ENST00000558428 EGFRP00533 1210 aa15.24■□□□□ 0.03
SMAD3-205ENST00000558428 PHKA1P46020 1223 aa15.24■□□□□ 0.03
SMAD3-205ENST00000558428 HIRAP54198 1017 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-205ENST00000558428 ZNF280AP59817 542 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-205ENST00000558428 FKBP1AP62942 108 aaKnown RBP15.24■□□□□ 0.03
SMAD3-205ENST00000558428 HSP90AB4PQ58FF6 505 aa15.24■□□□□ 0.03
SMAD3-205ENST00000558428 MFSD14BQ5SR56 506 aa15.24■□□□□ 0.03
SMAD3-205ENST00000558428 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
SMAD3-205ENST00000558428 MYOZ2Q9NPC6 264 aa15.24■□□□□ 0.03
SMAD3-205ENST00000558428 GNL3LQ9NVN8 582 aaKnown RBP15.24■□□□□ 0.03
SMAD3-205ENST00000558428 HDAC9Q9UKV0 1011 aa15.24■□□□□ 0.03
SMAD3-205ENST00000558428 F8W031 263 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-205ENST00000558428 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
SMAD3-205ENST00000558428 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-205ENST00000558428 CCDC102BQ68D86 513 aa15.23■□□□□ 0.03
SMAD3-205ENST00000558428 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
SMAD3-205ENST00000558428 GPR108Q9NPR9 543 aa15.23■□□□□ 0.03
SMAD3-205ENST00000558428 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
SMAD3-205ENST00000558428 MMP14P50281 582 aa15.22■□□□□ 0.03
SMAD3-205ENST00000558428 GORABQ5T7V8 394 aa15.22■□□□□ 0.03
SMAD3-205ENST00000558428 CNTROBQ8N137 903 aa15.22■□□□□ 0.03
SMAD3-205ENST00000558428 TBC1D22AQ8WUA7 517 aa15.22■□□□□ 0.03
SMAD3-205ENST00000558428 APBB1O00213 710 aa15.21■□□□□ 0.03
SMAD3-205ENST00000558428 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
SMAD3-205ENST00000558428 DENND2AQ9ULE3 1009 aa15.21■□□□□ 0.03
SMAD3-205ENST00000558428 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-205ENST00000558428 SEMA3EO15041 775 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 HSPA6P17066 643 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 SCARF1Q14162 830 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 WDR66Q8TBY9 1149 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 RHPN1Q8TCX5 695 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 KIF1BPQ96EK5 621 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 DBNDD2Q9BQY9 259 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 PGAP2Q9UHJ9 254 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 PCDHB15Q9Y5E8 787 aa15.2■□□□□ 0.02
SMAD3-205ENST00000558428 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
SMAD3-205ENST00000558428 ITGBL1O95965 494 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-205ENST00000558428 RASGRF1Q13972 1273 aa15.19■□□□□ 0.02
SMAD3-205ENST00000558428 EAF2Q96CJ1 260 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-205ENST00000558428 CCDC8Q9H0W5 538 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-205ENST00000558428 IL1RAPL2Q9NP60 686 aa15.19■□□□□ 0.02
SMAD3-205ENST00000558428 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
SMAD3-205ENST00000558428 TTF2Q9UNY4 1162 aaKnown RBP15.19■□□□□ 0.02
SMAD3-205ENST00000558428 ASTN2O75129 1339 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-205ENST00000558428 WNT10BO00744 389 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 ZBTB22O15209 634 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 DLGAP5Q15398 846 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 GRIK5Q16478 980 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 NBPF9Q3BBW0 867 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 CCDC158Q5M9N0 1113 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 AACSQ86V21 672 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
SMAD3-205ENST00000558428 GLIS2Q9BZE0 524 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-205ENST00000558428 TLR7Q9NYK1 1049 aaKnown RBP15.18■□□□□ 0.02
SMAD3-205ENST00000558428 TRPM7Q96QT4 1865 aa15.18■□□□□ 0.02
SMAD3-205ENST00000558428 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 ECM29Q5VYK3 1845 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 UQCRFS1P1P0C7P4 283 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-205ENST00000558428 APLP1P51693 650 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 RBM5P52756 815 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMAD3-205ENST00000558428 CFAP100Q494V2 611 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 TTC39AQ5SRH9 613 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 ANGEL2Q5VTE6 544 aaKnown RBP15.17■□□□□ 0.02
SMAD3-205ENST00000558428 CDC37L1Q7L3B6 337 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 CLASRPQ8N2M8 674 aaKnown RBP15.17■□□□□ 0.02
SMAD3-205ENST00000558428 EXOC6Q8TAG9 804 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 BCL11AQ9H165 835 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 DBNLQ9UJU6 430 aaKnown RBP15.17■□□□□ 0.02
SMAD3-205ENST00000558428 SUGT1Q9Y2Z0 365 aa15.17■□□□□ 0.02
SMAD3-205ENST00000558428 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
SMAD3-205ENST00000558428 CEP350Q5VT06 3117 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 TRAF5O00463 557 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 AAMPQ13685 434 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 KRT26Q7Z3Y9 468 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 MTMR14Q8NCE2 650 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 ZBED3Q96IU2 234 aaPredicted RBP15.16■□□□□ 0.02
SMAD3-205ENST00000558428 DCTPP1Q9H773 170 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 SERPINA10Q9UK55 444 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 PCDHAC2Q9Y5I4 1007 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 MAST3O60307 1309 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 SALL1Q9NSC2 1324 aa15.16■□□□□ 0.02
SMAD3-205ENST00000558428 AKAP11Q9UKA4 1901 aa15.15■□□□□ 0.02
SMAD3-205ENST00000558428 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms