RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 KLHL23Q8NBE8 558 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 POP1Q99575 1024 aaKnown RBP6.27□□□□□ -1.41
LRRC28-205ENST00000558248 ZFYVE28Q9HCC9 887 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 CLASP1Q7Z460 1538 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 E9PSI1 815 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 H3BRJ5 948 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 ARL4DP49703 201 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 KCNA1Q09470 495 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 SETDB1Q15047 1291 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 DMRTB1Q96MA1 342 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 ADAM19Q9H013 955 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 GAPVD1Q14C86 1478 aa6.26□□□□□ -1.41
LRRC28-205ENST00000558248 FSCN2O14926 492 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 ADAM23O75077 832 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 EPHA1P21709 976 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 CD68P34810 354 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-205ENST00000558248 PIP4K2BP78356 416 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 TXNDC11Q6PKC3 985 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 FBXO41Q8TF61 875 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 BSNDQ8WZ55 320 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 WNT8BQ93098 351 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 ZKSCAN3Q9BRR0 538 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 AKTIPQ9H8T0 292 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 SEC31BQ9NQW1 1179 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 SH2B1Q9NRF2 756 aaPredicted RBP6.25□□□□□ -1.41
LRRC28-205ENST00000558248 TPSG1Q9NRR2 321 aa6.25□□□□□ -1.41
LRRC28-205ENST00000558248 TDRD9Q8NDG6 1382 aaKnown RBP6.24□□□□□ -1.41
LRRC28-205ENST00000558248 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-205ENST00000558248 CPNE3O75131 537 aaKnown RBP6.24□□□□□ -1.41
LRRC28-205ENST00000558248 ACPPP15309 386 aa6.24□□□□□ -1.41
LRRC28-205ENST00000558248 IREB2P48200 963 aaKnown RBP6.24□□□□□ -1.41
LRRC28-205ENST00000558248 ECM1Q16610 540 aa6.24□□□□□ -1.41
LRRC28-205ENST00000558248 ASAP3Q8TDY4 903 aa6.24□□□□□ -1.41
LRRC28-205ENST00000558248 WFDC12Q8WWY7 111 aa6.24□□□□□ -1.41
LRRC28-205ENST00000558248 FOXD4L4Q8WXT5 416 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-205ENST00000558248 CARD10Q9BWT7 1032 aa6.24□□□□□ -1.41
LRRC28-205ENST00000558248 RBCK1Q9BYM8 510 aa6.24□□□□□ -1.41
LRRC28-205ENST00000558248 GZF1Q9H116 711 aaPredicted RBP6.24□□□□□ -1.41
LRRC28-205ENST00000558248 NFKBIEO00221 500 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 TMEM130Q8N3G9 435 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 SLC7A3Q8WY07 619 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 NXPE3Q969Y0 559 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 TP53INP1Q96A56 240 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 BHLHE41Q9C0J9 482 aaPredicted RBP6.23□□□□□ -1.41
LRRC28-205ENST00000558248 DNAJC25Q9H1X3 360 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 OSGEPQ9NPF4 335 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 DCTN4Q9UJW0 460 aa6.23□□□□□ -1.41
LRRC28-205ENST00000558248 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.23□□□□□ -1.41
LRRC28-205ENST00000558248 TARBP1Q13395 1621 aaKnown RBP6.22□□□□□ -1.41
LRRC28-205ENST00000558248 F8W735 103 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-205ENST00000558248 TRPA1O75762 1119 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 POLR3DP05423 398 aaPredicted RBP6.22□□□□□ -1.41
LRRC28-205ENST00000558248 IKBKEQ14164 716 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 ACAD11Q709F0 780 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 GALNT12Q8IXK2 581 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 HHIPQ96QV1 700 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 SEMA6BQ9H3T3 888 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 LATS2Q9NRM7 1088 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 SOX13Q9UN79 622 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 IVNS1ABPQ9Y6Y0 642 aa6.22□□□□□ -1.41
LRRC28-205ENST00000558248 GLB1P16278 677 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 MAPK1P28482 360 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 NOS3P29474 1203 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 C19orf57Q0VDD7 668 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 ORC1Q13415 861 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 DUOXA2Q1HG44 320 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 PEAR1Q5VY43 1037 aaPredicted RBP6.21□□□□□ -1.42
LRRC28-205ENST00000558248 GALNT11Q8NCW6 608 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 CEP41Q9BYV8 373 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 NIF3L1Q9GZT8 377 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 EHD4Q9H223 541 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 LIN7BQ9HAP6 207 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 SYNJ1O43426 1573 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 SNAPC4Q5SXM2 1469 aa6.21□□□□□ -1.42
LRRC28-205ENST00000558248 KIF13AQ9H1H9 1805 aa6.2□□□□□ -1.42
LRRC28-205ENST00000558248 ABCC8Q09428 1581 aa6.2□□□□□ -1.42
LRRC28-205ENST00000558248 EIF1AYO14602 144 aaKnown RBP6.2□□□□□ -1.42
LRRC28-205ENST00000558248 GPR182O15218 404 aa6.2□□□□□ -1.42
LRRC28-205ENST00000558248 H2AFB1P0C5Y9 115 aa6.2□□□□□ -1.42
LRRC28-205ENST00000558248 H2AFB2P0C5Z0 115 aa6.2□□□□□ -1.42
LRRC28-205ENST00000558248 RSPO4Q2I0M5 234 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-205ENST00000558248 FOXD4L6Q3SYB3 417 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-205ENST00000558248 ADAMTSL4Q6UY14 1074 aa6.2□□□□□ -1.42
LRRC28-205ENST00000558248 FOXD4L3Q6VB84 417 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-205ENST00000558248 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.2□□□□□ -1.42
LRRC28-205ENST00000558248 ZSCAN29Q8IWY8 852 aaPredicted RBP6.2□□□□□ -1.42
LRRC28-205ENST00000558248 ALKBH8Q96BT7 664 aaKnown RBP6.2□□□□□ -1.42
LRRC28-205ENST00000558248 RAD54L2Q9Y4B4 1467 aa6.2□□□□□ -1.42
LRRC28-205ENST00000558248 A0A1W2PP55 124 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 DYRK3O43781 588 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 GADD45BO75293 160 aaPredicted RBP6.19□□□□□ -1.42
LRRC28-205ENST00000558248 NLRP12P59046 1061 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 NKAPLQ5M9Q1 402 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 TMC7Q7Z402 723 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 CCNJLQ8IV13 435 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 DDX54Q8TDD1 881 aaKnown RBP6.19□□□□□ -1.42
LRRC28-205ENST00000558248 ZNF428Q96B54 188 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 KLHDC7BQ96G42 594 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 CSRNP1Q96S65 589 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms