RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
TRPM1-206ENST00000558212 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
TRPM1-206ENST00000558212 IGSF1Q8N6C5 1336 aa9.24□□□□□ -0.93
TRPM1-206ENST00000558212 PCNTO95613 3336 aa9.24□□□□□ -0.93
TRPM1-206ENST00000558212 USP31Q70CQ4 1352 aa9.24□□□□□ -0.93
TRPM1-206ENST00000558212 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
TRPM1-206ENST00000558212 C5P01031 1676 aa9.23□□□□□ -0.93
TRPM1-206ENST00000558212 SERPINB4P48594 390 aa9.23□□□□□ -0.93
TRPM1-206ENST00000558212 TNS4Q8IZW8 715 aa9.23□□□□□ -0.93
TRPM1-206ENST00000558212 KLRG1Q96E93 195 aa9.23□□□□□ -0.93
TRPM1-206ENST00000558212 SCHIP1Q9P0W5 487 aaPredicted RBP9.23□□□□□ -0.93
TRPM1-206ENST00000558212 EGFL7Q9UHF1 273 aa9.23□□□□□ -0.93
TRPM1-206ENST00000558212 IQSEC3Q9UPP2 1182 aaPredicted RBP9.23□□□□□ -0.93
TRPM1-206ENST00000558212 USP47Q96K76 1375 aa9.23□□□□□ -0.93
TRPM1-206ENST00000558212 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 SOWAHDA6NJG2 315 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 LGR5O75473 907 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 ZIC2O95409 532 aaPredicted RBP9.22□□□□□ -0.93
TRPM1-206ENST00000558212 SMTNP53814 917 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 CBLBQ13191 982 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 CLN3Q13286 438 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 ZNF295-AS1Q8N0V1 137 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 STAG2Q8N3U4 1231 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
TRPM1-206ENST00000558212 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
TRPM1-206ENST00000558212 TSPAN10Q9H1Z9 355 aaPredicted RBP9.22□□□□□ -0.93
TRPM1-206ENST00000558212 A6NJY4 79 aa9.21□□□□□ -0.94
TRPM1-206ENST00000558212 TNFRSF10AO00220 468 aa9.21□□□□□ -0.94
TRPM1-206ENST00000558212 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
TRPM1-206ENST00000558212 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
TRPM1-206ENST00000558212 RAB6BQ9NRW1 208 aa9.21□□□□□ -0.94
TRPM1-206ENST00000558212 TAF1LQ8IZX4 1826 aa9.2□□□□□ -0.94
TRPM1-206ENST00000558212 TTC24A2A3L6 582 aaPredicted RBP9.2□□□□□ -0.94
TRPM1-206ENST00000558212 PTCD1O75127 700 aaKnown RBP9.2□□□□□ -0.94
TRPM1-206ENST00000558212 WDR4P57081 412 aaKnown RBP9.2□□□□□ -0.94
TRPM1-206ENST00000558212 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
TRPM1-206ENST00000558212 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
TRPM1-206ENST00000558212 NSD3Q9BZ95 1437 aa9.2□□□□□ -0.94
TRPM1-206ENST00000558212 A0A1W2PRU2 124 aa9.19□□□□□ -0.94
TRPM1-206ENST00000558212 RGS20O76081 388 aa9.19□□□□□ -0.94
TRPM1-206ENST00000558212 PTGIRP43119 386 aa9.19□□□□□ -0.94
TRPM1-206ENST00000558212 FSTL1Q12841 308 aa9.19□□□□□ -0.94
TRPM1-206ENST00000558212 CAPN12Q6ZSI9 719 aa9.19□□□□□ -0.94
TRPM1-206ENST00000558212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.19□□□□□ -0.94
TRPM1-206ENST00000558212 MEIOBQ8N635 442 aa9.19□□□□□ -0.94
TRPM1-206ENST00000558212 ZCRB1Q8TBF4 217 aaKnown RBP9.19□□□□□ -0.94
TRPM1-206ENST00000558212 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
TRPM1-206ENST00000558212 CDK2AP1O14519 115 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 C4BP0C0L5 1744 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 ECM1Q16610 540 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 CCDC27Q2M243 656 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 SLC9A9Q8IVB4 645 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 IP6K1Q92551 441 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 C2orf49Q9BVC5 232 aaPredicted RBP9.18□□□□□ -0.94
TRPM1-206ENST00000558212 NMRK2Q9NPI5 230 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 WWC3Q9ULE0 1092 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
TRPM1-206ENST00000558212 UBR3Q6ZT12 1888 aa9.17□□□□□ -0.94
TRPM1-206ENST00000558212 TOGARAM1Q9Y4F4 1720 aa9.17□□□□□ -0.94
TRPM1-206ENST00000558212 PALLDQ8WX93 1383 aa9.17□□□□□ -0.94
TRPM1-206ENST00000558212 SBNO2Q9Y2G9 1366 aa9.17□□□□□ -0.94
TRPM1-206ENST00000558212 FOXD4L5Q5VV16 416 aaPredicted RBP9.17□□□□□ -0.94
TRPM1-206ENST00000558212 NME9Q86XW9 330 aa9.17□□□□□ -0.94
TRPM1-206ENST00000558212 C16orf71Q8IYS4 520 aaPredicted RBP9.17□□□□□ -0.94
TRPM1-206ENST00000558212 FOXD4L4Q8WXT5 416 aaPredicted RBP9.17□□□□□ -0.94
TRPM1-206ENST00000558212 HPS1Q92902 700 aa9.17□□□□□ -0.94
TRPM1-206ENST00000558212 SEPT3Q9UH03 358 aa9.17□□□□□ -0.94
TRPM1-206ENST00000558212 MEGF6O75095 1541 aa9.16□□□□□ -0.94
TRPM1-206ENST00000558212 EDC4Q6P2E9 1401 aaKnown RBP9.16□□□□□ -0.94
TRPM1-206ENST00000558212 C10orf71Q711Q0 1435 aa9.16□□□□□ -0.94
TRPM1-206ENST00000558212 PLEKHG2Q9H7P9 1386 aa9.16□□□□□ -0.94
TRPM1-206ENST00000558212 CGNL1Q0VF96 1302 aa9.16□□□□□ -0.94
TRPM1-206ENST00000558212 ICMTO60725 284 aa9.16□□□□□ -0.94
TRPM1-206ENST00000558212 HIRAP54198 1017 aaPredicted RBP9.16□□□□□ -0.94
TRPM1-206ENST00000558212 HTRA3P83110 453 aa9.16□□□□□ -0.94
TRPM1-206ENST00000558212 KIF13BQ9NQT8 1826 aa9.16□□□□□ -0.94
TRPM1-206ENST00000558212 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.94
TRPM1-206ENST00000558212 CD163L1Q9NR16 1453 aa9.15□□□□□ -0.94
TRPM1-206ENST00000558212 KIAA1551Q9HCM1 1747 aa9.15□□□□□ -0.94
TRPM1-206ENST00000558212 NPR3P17342 541 aa9.15□□□□□ -0.94
TRPM1-206ENST00000558212 PSMA6P60900 246 aaKnown RBP9.15□□□□□ -0.94
TRPM1-206ENST00000558212 TLR1Q15399 786 aa9.15□□□□□ -0.94
TRPM1-206ENST00000558212 GTF3C2Q8WUA4 911 aaPredicted RBP9.15□□□□□ -0.94
TRPM1-206ENST00000558212 LTV1Q96GA3 475 aaPredicted RBP9.15□□□□□ -0.94
TRPM1-206ENST00000558212 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
TRPM1-206ENST00000558212 MKNK1Q9BUB5 465 aa9.15□□□□□ -0.94
TRPM1-206ENST00000558212 DNMT3AQ9Y6K1 912 aaPredicted RBP9.15□□□□□ -0.94
TRPM1-206ENST00000558212 GPC1P35052 558 aa9.14□□□□□ -0.95
TRPM1-206ENST00000558212 RBM25P49756 843 aaKnown RBP9.14□□□□□ -0.95
TRPM1-206ENST00000558212 TGFB2P61812 414 aa9.14□□□□□ -0.95
TRPM1-206ENST00000558212 CENPCQ03188 943 aa9.14□□□□□ -0.95
TRPM1-206ENST00000558212 NBPF15Q8N660 670 aa9.14□□□□□ -0.95
TRPM1-206ENST00000558212 HELQQ8TDG4 1101 aa9.14□□□□□ -0.95
TRPM1-206ENST00000558212 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
TRPM1-206ENST00000558212 KDM2BQ8NHM5 1336 aa9.13□□□□□ -0.95
TRPM1-206ENST00000558212 TEAD4Q15561 434 aa9.13□□□□□ -0.95
TRPM1-206ENST00000558212 DNAJC14Q6Y2X3 702 aaPredicted RBP9.13□□□□□ -0.95
TRPM1-206ENST00000558212 HDGFL2Q7Z4V5 671 aaPredicted RBP9.13□□□□□ -0.95
TRPM1-206ENST00000558212 AMIGO3Q86WK7 504 aa9.13□□□□□ -0.95
TRPM1-206ENST00000558212 ZNF428Q96B54 188 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms