RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ZIC5Q96T25 663 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 IER2Q9BTL4 223 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 PRR12Q9ULL5 1215 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 PTCH2Q9Y6C5 1203 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 KDM2BQ8NHM5 1336 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 POTEMA6NI47 508 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 TFE3P19532 575 aaPredicted RBP5.1□□□□□ -1.59
TDP1-217ENST00000557782 ATP4AP20648 1035 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 EXOSC10Q01780 885 aaKnown RBP5.1□□□□□ -1.59
TDP1-217ENST00000557782 SEPT6Q14141 434 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 JMYQ8N9B5 988 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 GATAD2BQ8WXI9 593 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 RELTQ969Z4 430 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 C8orf48Q96LL4 319 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 NECAB3Q96P71 396 aaPredicted RBP5.1□□□□□ -1.59
TDP1-217ENST00000557782 RBSNQ9H1K0 784 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 MIR1-1HGQ9H1L0 117 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 ZNRF3Q9ULT6 936 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 SAMM50Q9Y512 469 aa5.1□□□□□ -1.59
TDP1-217ENST00000557782 ENC1O14682 589 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 DDAH1O94760 285 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 GJB6O95452 261 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 F13A1P00488 732 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 CYP2E1P05181 493 aaPredicted RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 WDR4P57081 412 aaKnown RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 SSRP1Q08945 709 aaKnown RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 PPP2R5EQ16537 467 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 DALRD3Q5D0E6 543 aaKnown RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 CT47A1Q5JQC4 288 aaPredicted RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 CCNJLQ8IV13 435 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 REXO1Q8N1G1 1221 aaKnown RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 PGBD3Q8N328 593 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 ZSWIM2Q8NEG5 633 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 ST13P5Q8NFI4 369 aaPredicted RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 OR13H1Q8NG92 308 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 CHAC2Q8WUX2 184 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 PMM1Q92871 262 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 ZNF669Q96BR6 464 aaPredicted RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 TCF12Q99081 682 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 ZFAND3Q9H8U3 227 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 POLMQ9NP87 494 aaPredicted RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 BRD7Q9NPI1 651 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 GPN3Q9UHW5 284 aaPredicted RBP5.09□□□□□ -1.59
TDP1-217ENST00000557782 SALL4Q9UJQ4 1053 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 ATP8A1Q9Y2Q0 1164 aa5.09□□□□□ -1.59
TDP1-217ENST00000557782 A0A1B0GTH6 734 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 A0A1W2PNR3 127 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 ALG1L2C9J202 215 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 BPNT1O95861 308 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 GRNP28799 593 aaKnown RBP5.08□□□□□ -1.6
TDP1-217ENST00000557782 CASP7P55210 303 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 WDR44Q5JSH3 913 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 CCSAPQ6IQ19 270 aaPredicted RBP5.08□□□□□ -1.6
TDP1-217ENST00000557782 BNC2Q6ZN30 1099 aaPredicted RBP5.08□□□□□ -1.6
TDP1-217ENST00000557782 GK5Q6ZS86 529 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 NCAPG2Q86XI2 1143 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 RBBP8NLQ8NC74 664 aaPredicted RBP5.08□□□□□ -1.6
TDP1-217ENST00000557782 FBXO27Q8NI29 283 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 MFSD3Q96ES6 412 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 OSMRQ99650 979 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 PFDN2Q9UHV9 154 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 MCM8Q9UJA3 840 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 CD2APQ9Y5K6 639 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 EID1Q9Y6B2 187 aa5.08□□□□□ -1.6
TDP1-217ENST00000557782 KHNYNO15037 678 aaKnown RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 ITPKAP23677 461 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 PMLP29590 882 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 SOX5P35711 763 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 TMEM67Q5HYA8 995 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 RPS26P11Q5JNZ5 115 aaPredicted RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 LIAT1Q6ZQX7 453 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 REC114Q7Z4M0 266 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 LSRQ86X29 649 aaPredicted RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 MEIOBQ8N635 442 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 C19orf47Q8N9M1 422 aaKnown RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 JARID2Q92833 1246 aaPredicted RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 FAM163AQ96GL9 167 aaPredicted RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 TRERF1Q96PN7 1200 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 INSM2Q96T92 566 aaPredicted RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 SPOCK3Q9BQ16 436 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 ZKSCAN3Q9BRR0 538 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 TSEN34Q9BSV6 310 aaKnown RBP5.07□□□□□ -1.6
TDP1-217ENST00000557782 TNKS2Q9H2K2 1166 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 BRMS1Q9HCU9 246 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 SEC31BQ9NQW1 1179 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 ZMYM5Q9UJ78 669 aa5.07□□□□□ -1.6
TDP1-217ENST00000557782 KIF3BO15066 747 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 PLIN1O60240 522 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 DIAPH1O60610 1272 aaKnown RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 MMP20O60882 483 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 SASH3O75995 380 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 ITGBL1O95965 494 aaPredicted RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 PSAPP07602 524 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 RARAP10276 462 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 TIMP2P16035 220 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 STAT3P40763 770 aa5.06□□□□□ -1.6
TDP1-217ENST00000557782 CDKN1CP49918 316 aaPredicted RBP5.06□□□□□ -1.6
TDP1-217ENST00000557782 EVA1CP58658 441 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms