RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 FKBP4Q02790 459 aaKnown RBP eCLIP12.38□□□□□ -0.43
GABRB3-212ENST00000557641 CC2D2BQ6DHV5 1058 aa12.38□□□□□ -0.43
GABRB3-212ENST00000557641 FBXO33Q7Z6M2 555 aa12.38□□□□□ -0.43
GABRB3-212ENST00000557641 VPS37DQ86XT2 251 aa12.38□□□□□ -0.43
GABRB3-212ENST00000557641 TBC1D32Q96NH3 1257 aa12.38□□□□□ -0.43
GABRB3-212ENST00000557641 PDGFDQ9GZP0 370 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-212ENST00000557641 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.43
GABRB3-212ENST00000557641 GGA1Q9UJY5 639 aa12.38□□□□□ -0.43
GABRB3-212ENST00000557641 SPEF2Q9C093 1822 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 SGSM2O43147 1006 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 ANP32AP39687 249 aaKnown RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 MCAMP43121 646 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 ZAP70P43403 619 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 BCAMP50895 628 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 TGFB2P61812 414 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 SPATA5Q8NB90 893 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 C22orf23Q9BZE7 217 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 HMG20BQ9P0W2 317 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 DENND2AQ9ULE3 1009 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
GABRB3-212ENST00000557641 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 ARAP2Q8WZ64 1704 aa12.37□□□□□ -0.43
GABRB3-212ENST00000557641 COL4A1P02462 1669 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 SNAP23O00161 211 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 TIE1P35590 1138 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 PSEN1P49768 467 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 GPSM2P81274 684 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 ZNF804AQ7Z570 1209 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 USP26Q9BXU7 913 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 HELLSQ9NRZ9 838 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
GABRB3-212ENST00000557641 RNF113AO15541 343 aaKnown RBP12.35□□□□□ -0.43
GABRB3-212ENST00000557641 UFL1O94874 794 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 ZBTB7AO95365 584 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 MCCP23508 829 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 GYG1P46976 350 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 RASGRF1Q13972 1273 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 SCARF1Q14162 830 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 CWC27Q6UX04 472 aaKnown RBP12.35□□□□□ -0.43
GABRB3-212ENST00000557641 MPNDQ8N594 471 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 EDC3Q96F86 508 aaKnown RBP12.35□□□□□ -0.43
GABRB3-212ENST00000557641 EYA3Q99504 573 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
GABRB3-212ENST00000557641 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
GABRB3-212ENST00000557641 CYP2E1P05181 493 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-212ENST00000557641 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
GABRB3-212ENST00000557641 NMIQ13287 307 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-212ENST00000557641 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
GABRB3-212ENST00000557641 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
GABRB3-212ENST00000557641 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
GABRB3-212ENST00000557641 DPP8Q6V1X1 898 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-212ENST00000557641 TBC1D16Q8TBP0 767 aa12.34□□□□□ -0.43
GABRB3-212ENST00000557641 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
GABRB3-212ENST00000557641 FRAT2O75474 233 aaPredicted RBP12.33□□□□□ -0.44
GABRB3-212ENST00000557641 CHRNA5P30532 468 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 UBE3CQ15386 1083 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 ZMYM1Q5SVZ6 1142 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 SOGA3Q5TF21 947 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
GABRB3-212ENST00000557641 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 SUPT20HQ8NEM7 779 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 CD2APQ9Y5K6 639 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 NDUFB9Q9Y6M9 179 aa12.33□□□□□ -0.44
GABRB3-212ENST00000557641 LRRC37AA6NMS7 1700 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 ANAPC15P60006 121 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 SPTY2D1Q68D10 685 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-212ENST00000557641 PI16Q6UXB8 463 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
GABRB3-212ENST00000557641 WDR66Q8TBY9 1149 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 C7orf43Q8WVR3 580 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 APPBP2Q92624 585 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 FAM227BQ96M60 508 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 RTFDC1Q9BY42 306 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-212ENST00000557641 ZC3H12CQ9C0D7 883 aaKnown RBP12.32□□□□□ -0.44
GABRB3-212ENST00000557641 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-212ENST00000557641 POLLQ9UGP5 575 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
GABRB3-212ENST00000557641 A0A0D9SFI3 127 aa12.31□□□□□ -0.44
GABRB3-212ENST00000557641 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-212ENST00000557641 IL1R1P14778 569 aa12.31□□□□□ -0.44
GABRB3-212ENST00000557641 ADD2P35612 726 aa12.31□□□□□ -0.44
GABRB3-212ENST00000557641 SLC9C2Q5TAH2 1124 aa12.31□□□□□ -0.44
GABRB3-212ENST00000557641 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
GABRB3-212ENST00000557641 LSG1Q9H089 658 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms