RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 ATP5JP18859 108 aa17.26■□□□□ 0.35
RIPK3-206ENST00000557624 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
RIPK3-206ENST00000557624 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
RIPK3-206ENST00000557624 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
RIPK3-206ENST00000557624 RNF181Q9P0P0 153 aa17.26■□□□□ 0.35
RIPK3-206ENST00000557624 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
RIPK3-206ENST00000557624 COL1A1P02452 1464 aaPredicted RBP17.25■□□□□ 0.35
RIPK3-206ENST00000557624 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
RIPK3-206ENST00000557624 PODNQ7Z5L7 613 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 ZNF512BQ96KM6 892 aaPredicted RBP17.25■□□□□ 0.35
RIPK3-206ENST00000557624 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
RIPK3-206ENST00000557624 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
RIPK3-206ENST00000557624 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 SEMA3EO15041 775 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 SPATA5Q8NB90 893 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 DENND2AQ9ULE3 1009 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
RIPK3-206ENST00000557624 AOX1Q06278 1338 aa17.24■□□□□ 0.35
RIPK3-206ENST00000557624 GTF2IP78347 998 aa17.24■□□□□ 0.35
RIPK3-206ENST00000557624 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
RIPK3-206ENST00000557624 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
RIPK3-206ENST00000557624 RAD17O75943 681 aa17.23■□□□□ 0.35
RIPK3-206ENST00000557624 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
RIPK3-206ENST00000557624 ZAP70P43403 619 aa17.23■□□□□ 0.35
RIPK3-206ENST00000557624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.23■□□□□ 0.35
RIPK3-206ENST00000557624 HAUS7Q99871 368 aa17.23■□□□□ 0.35
RIPK3-206ENST00000557624 TIAM2Q8IVF5 1701 aa17.22■□□□□ 0.35
RIPK3-206ENST00000557624 TTLL5Q6EMB2 1281 aa17.22■□□□□ 0.35
RIPK3-206ENST00000557624 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
RIPK3-206ENST00000557624 USP17L3A6NCW0 530 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 USP17L4A6NCW7 530 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 GOLIM4O00461 696 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 TTC22Q5TAA0 569 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 USP17L1Q7RTZ2 530 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 EIF6P56537 245 aaKnown RBP17.21■□□□□ 0.35
RIPK3-206ENST00000557624 PSME4Q14997 1843 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 TBC1D9Q6ZT07 1266 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 WDR66Q8TBY9 1149 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 MXD3Q9BW11 206 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 ANTXR1Q9H6X2 564 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 PAG1Q9NWQ8 432 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 ABCF2Q9UG63 623 aa17.21■□□□□ 0.35
RIPK3-206ENST00000557624 PDS5AQ29RF7 1337 aaKnown RBP17.2■□□□□ 0.34
RIPK3-206ENST00000557624 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
RIPK3-206ENST00000557624 FZD9O00144 591 aa17.2■□□□□ 0.34
RIPK3-206ENST00000557624 CYP2E1P05181 493 aaPredicted RBP17.2■□□□□ 0.34
RIPK3-206ENST00000557624 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
RIPK3-206ENST00000557624 CXCL9Q07325 125 aa17.2■□□□□ 0.34
RIPK3-206ENST00000557624 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
RIPK3-206ENST00000557624 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
RIPK3-206ENST00000557624 MYO5AQ9Y4I1 1855 aaKnown RBP17.2■□□□□ 0.34
RIPK3-206ENST00000557624 ZNF541Q9H0D2 1346 aa17.19■□□□□ 0.34
RIPK3-206ENST00000557624 PSMD14O00487 310 aa17.19■□□□□ 0.34
RIPK3-206ENST00000557624 CIAPIN1Q6FI81 312 aa17.19■□□□□ 0.34
RIPK3-206ENST00000557624 PIH1D3Q9NQM4 214 aaKnown RBP17.19■□□□□ 0.34
RIPK3-206ENST00000557624 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
RIPK3-206ENST00000557624 ZNF646O15015 1829 aaPredicted RBP17.18■□□□□ 0.34
RIPK3-206ENST00000557624 ZBTB22O15209 634 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 IDH1O75874 414 aaKnown RBP17.18■□□□□ 0.34
RIPK3-206ENST00000557624 TNIP1Q15025 636 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 TTF1Q15361 905 aaPredicted RBP17.18■□□□□ 0.34
RIPK3-206ENST00000557624 CERS5Q8N5B7 392 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 GJA3Q9Y6H8 435 aa17.18■□□□□ 0.34
RIPK3-206ENST00000557624 SALL1Q9NSC2 1324 aa17.17■□□□□ 0.34
RIPK3-206ENST00000557624 PRDX5P30044 214 aa17.17■□□□□ 0.34
RIPK3-206ENST00000557624 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
RIPK3-206ENST00000557624 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
RIPK3-206ENST00000557624 EVI5LQ96CN4 794 aa17.17■□□□□ 0.34
RIPK3-206ENST00000557624 F8W031 263 aaPredicted RBP17.16■□□□□ 0.34
RIPK3-206ENST00000557624 VIL1P09327 827 aaKnown RBP17.16■□□□□ 0.34
RIPK3-206ENST00000557624 SDSP20132 328 aa17.16■□□□□ 0.34
RIPK3-206ENST00000557624 GRIK5Q16478 980 aa17.16■□□□□ 0.34
RIPK3-206ENST00000557624 RSBN1LQ6PCB5 846 aaPredicted RBP17.16■□□□□ 0.34
RIPK3-206ENST00000557624 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
RIPK3-206ENST00000557624 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
RIPK3-206ENST00000557624 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
RIPK3-206ENST00000557624 DOCK2Q92608 1830 aa17.15■□□□□ 0.34
RIPK3-206ENST00000557624 LDHBP07195 334 aaKnown RBP17.15■□□□□ 0.34
RIPK3-206ENST00000557624 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
RIPK3-206ENST00000557624 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
RIPK3-206ENST00000557624 KIAA0825Q8IV33 1275 aa17.15■□□□□ 0.34
RIPK3-206ENST00000557624 MYH7P12883 1935 aa17.14■□□□□ 0.34
RIPK3-206ENST00000557624 SPTY2D1Q68D10 685 aaPredicted RBP17.14■□□□□ 0.33
RIPK3-206ENST00000557624 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
RIPK3-206ENST00000557624 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
RIPK3-206ENST00000557624 MYO3BQ8WXR4 1341 aa17.14■□□□□ 0.33
RIPK3-206ENST00000557624 FKBP1AP62942 108 aaKnown RBP17.14■□□□□ 0.33
RIPK3-206ENST00000557624 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
RIPK3-206ENST00000557624 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
RIPK3-206ENST00000557624 GPC2Q8N158 579 aa17.13■□□□□ 0.33
RIPK3-206ENST00000557624 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.33
RIPK3-206ENST00000557624 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
RIPK3-206ENST00000557624 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms