RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ERVV-1B6SEH8 477 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 H0YGN5 161 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 BBOX1O75936 387 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 ALDH1A1P00352 501 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 OTOP1Q7RTM1 612 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 PACS2Q86VP3 889 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 SP8Q8IXZ3 490 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 TTC13Q8NBP0 860 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 PITPNM2Q9BZ72 1349 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 GPTP24298 496 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 YTHDC1Q96MU7 727 aaKnown RBP9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 NBPF3Q9H094 633 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 KIAA1468Q9P260 1216 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 PTPN22Q9Y2R2 807 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 LAMB2P55268 1798 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 MAP3K15Q6ZN16 1313 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 UBN2Q6ZU65 1347 aa9.03□□□□□ -0.96
SPTLC2-206ENST00000557566 GOLGA8CPA6NN73 597 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 TK2O00142 265 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 NTSR2O95665 410 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 ANGEL2Q5VTE6 544 aaKnown RBP9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 PPP1R42Q7Z4L9 355 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 R3HDMLQ9H3Y0 253 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 PANK3Q9H999 370 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 SEPT9Q9UHD8 586 aaPredicted RBP9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 DUOX1Q9NRD9 1551 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 LRRC37AA6NMS7 1700 aa9.02□□□□□ -0.97
SPTLC2-206ENST00000557566 UBE2Q2LH0YL09 131 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 TCIRG1Q13488 830 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 WASHC4Q2M389 1173 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 MOB2Q70IA6 237 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 NGEFQ8N5V2 710 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 DBNDD1Q9H9R9 158 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 KDM3BQ7LBC6 1761 aa9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 ASTN2O75129 1339 aaPredicted RBP9.01□□□□□ -0.97
SPTLC2-206ENST00000557566 TAF1P21675 1872 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 ZNF609O15014 1411 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 SMAPO00193 183 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 SCARF1Q14162 830 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 TMC4Q7Z404 712 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 ZNF34Q8IZ26 560 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
SPTLC2-206ENST00000557566 ZNF333Q96JL9 665 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 ANP32EQ9BTT0 268 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 SCN9AQ15858 1988 aa9□□□□□ -0.97
SPTLC2-206ENST00000557566 RTL9Q8NET4 1388 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 ECE2O60344 883 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 OATP04181 439 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 NF2P35240 595 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 SLC4A8Q2Y0W8 1093 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 SLC10A5Q5PT55 438 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 DDX46Q7L014 1031 aaKnown RBP8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 NBPF11Q86T75 865 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 PARP9Q8IXQ6 854 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 SLC4A5Q9BY07 1137 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 ZBTB3Q9H5J0 574 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 LAMB1P07942 1786 aa8.99□□□□□ -0.97
SPTLC2-206ENST00000557566 INHBEP58166 350 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 ZNF280AP59817 542 aaPredicted RBP8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 GRAPQ13588 217 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 TTLL7Q6ZT98 887 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 GRAPLQ8TC17 118 aaPredicted RBP8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 CD99L2Q8TCZ2 262 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 NECTIN2Q92692 538 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 EYA3Q99504 573 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 UTP14AQ9BVJ6 771 aaKnown RBP8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 TMUB1Q9BVT8 246 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 KNSTRNQ9Y448 316 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 PSME4Q14997 1843 aa8.98□□□□□ -0.97
SPTLC2-206ENST00000557566 VCANP13611 3396 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 MANSC4A6NHS7 340 aaPredicted RBP8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 HRO43593 1189 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 VIL1P09327 827 aaKnown RBP8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 SLC9C1Q4G0N8 1177 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 SPRYD7Q5W111 196 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 GIGYF2Q6Y7W6 1299 aaKnown RBP8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 DPF3Q92784 378 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 KCNQ5Q9NR82 932 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 FAM198AQ9UFP1 575 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 NSFL1CQ9UNZ2 370 aaKnown RBP8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 ADGRG1Q9Y653 693 aa8.97□□□□□ -0.97
SPTLC2-206ENST00000557566 A0A1W2PPC1 479 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms