RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ILDR2Q71H61 639 aa17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 LSG1Q9H089 658 aaKnown RBP17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 HELLSQ9NRZ9 838 aa17.45■□□□□ 0.38
ARHGEF40-208ENST00000557498 MAST2Q6P0Q8 1798 aa17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 IDH1O75874 414 aaKnown RBP17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 DPEP1P16444 411 aa17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 ADD2P35612 726 aa17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 TGFB2P61812 414 aa17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 MCMDC2Q4G0Z9 681 aa17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 APPBP2Q92624 585 aa17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
ARHGEF40-208ENST00000557498 MCCP23508 829 aa17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 PTGER2P43116 358 aa17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 WASHC4Q2M389 1173 aa17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 CC2D2BQ6DHV5 1058 aa17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 ZNF589Q86UQ0 364 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 TDRD7Q8NHU6 1098 aaKnown RBP17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 MAST3O60307 1309 aa17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
ARHGEF40-208ENST00000557498 BRCA1P38398 1863 aaKnown RBP17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 FRAT2O75474 233 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 PDE6AP16499 860 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 KCNA3P22001 575 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 UBE3CQ15386 1083 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 TTLL6Q8N841 843 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 SEC62Q99442 399 aaKnown RBP17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 WWC3Q9ULE0 1092 aa17.42■□□□□ 0.38
ARHGEF40-208ENST00000557498 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF40-208ENST00000557498 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
ARHGEF40-208ENST00000557498 CCDC129Q6ZRS4 1044 aa17.41■□□□□ 0.38
ARHGEF40-208ENST00000557498 EYA3Q99504 573 aa17.41■□□□□ 0.38
ARHGEF40-208ENST00000557498 CD209Q9NNX6 404 aa17.41■□□□□ 0.38
ARHGEF40-208ENST00000557498 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
ARHGEF40-208ENST00000557498 TCRBV5S4A2TA0A5A2 114 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 M0R2C6 588 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 IL1R1P14778 569 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 PTH1RQ03431 593 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 OSBP2Q969R2 916 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 RTFDC1Q9BY42 306 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 COA1Q9GZY4 146 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 LRP2BPQ9P2M1 347 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 CD2APQ9Y5K6 639 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 ZNF532Q9HCE3 1301 aa17.4■□□□□ 0.38
ARHGEF40-208ENST00000557498 HSPA4P34932 840 aa17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 MAGEB6Q8N7X4 407 aa17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 WDR66Q8TBY9 1149 aa17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 KIF2CQ99661 725 aa17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 ZC3H12CQ9C0D7 883 aaKnown RBP17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 SALL1Q9NSC2 1324 aa17.39■□□□□ 0.37
ARHGEF40-208ENST00000557498 CCDC88AQ3V6T2 1871 aa17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 RIMBP2O15034 1052 aa17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 CCDC93Q567U6 631 aa17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 ZGPATQ8N5A5 531 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 PIM2Q9P1W9 311 aa17.38■□□□□ 0.37
ARHGEF40-208ENST00000557498 C21orf2O43822 256 aa17.37■□□□□ 0.37
ARHGEF40-208ENST00000557498 IGSF3O75054 1194 aa17.37■□□□□ 0.37
ARHGEF40-208ENST00000557498 ANAPC15P60006 121 aa17.37■□□□□ 0.37
ARHGEF40-208ENST00000557498 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
ARHGEF40-208ENST00000557498 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
ARHGEF40-208ENST00000557498 PUS7LQ9H0K6 701 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-208ENST00000557498 RBM8AQ9Y5S9 174 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-208ENST00000557498 SOGA3Q5TF21 947 aa17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 SPTY2D1Q68D10 685 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 DSCC1Q9BVC3 393 aa17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 SPON1Q9HCB6 807 aa17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 PPP1R1BQ9UD71 204 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 JAG2Q9Y219 1238 aa17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 FAM205AQ6ZU69 1335 aa17.36■□□□□ 0.37
ARHGEF40-208ENST00000557498 CHD4Q14839 1912 aa17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 GPAA1O43292 621 aa17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 RABEP1Q15276 862 aa17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 KCNB2Q92953 911 aa17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF40-208ENST00000557498 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 CYP7A1P22680 504 aa17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 PRDX5P30044 214 aa17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 NECTIN1Q15223 517 aa17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 DALRD3Q5D0E6 543 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 NAA16Q6N069 864 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 TBC1D22AQ8WUA7 517 aa17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 NSUN4Q96CB9 384 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 IPO9Q96P70 1041 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-208ENST00000557498 G3V3G9 751 aa17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 LDHBP07195 334 aaKnown RBP17.33■□□□□ 0.36
ARHGEF40-208ENST00000557498 MECOMQ03112 1051 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms