RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 MXD3Q9BW11 206 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
RDH11-210ENST00000557331 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
RDH11-210ENST00000557331 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
RDH11-210ENST00000557331 IL1R1P14778 569 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 SP3Q02447 781 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 CHRNDQ07001 517 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 PRKG1Q13976 671 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 TXNRD3Q86VQ6 643 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 LINS1Q8NG48 757 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 CEP290O15078 2479 aa13.03□□□□□ -0.32
RDH11-210ENST00000557331 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
RDH11-210ENST00000557331 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
RDH11-210ENST00000557331 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
RDH11-210ENST00000557331 IFIT5Q13325 482 aaKnown RBP13.02□□□□□ -0.33
RDH11-210ENST00000557331 CWF19L2Q2TBE0 894 aaKnown RBP13.02□□□□□ -0.33
RDH11-210ENST00000557331 HABP4Q5JVS0 413 aaKnown RBP13.02□□□□□ -0.33
RDH11-210ENST00000557331 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
RDH11-210ENST00000557331 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
RDH11-210ENST00000557331 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
RDH11-210ENST00000557331 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
RDH11-210ENST00000557331 DNAAF4Q8WXU2 420 aa13.01□□□□□ -0.33
RDH11-210ENST00000557331 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
RDH11-210ENST00000557331 CACNA1FO60840 1977 aa13□□□□□ -0.33
RDH11-210ENST00000557331 IL16Q14005 1332 aa13□□□□□ -0.33
RDH11-210ENST00000557331 IGF2BP3O00425 579 aaKnown RBP eCLIP13□□□□□ -0.33
RDH11-210ENST00000557331 GNRH1P01148 92 aa13□□□□□ -0.33
RDH11-210ENST00000557331 GTF2A2P52657 109 aa13□□□□□ -0.33
RDH11-210ENST00000557331 FLIIQ13045 1269 aa13□□□□□ -0.33
RDH11-210ENST00000557331 CRHR2Q13324 411 aa13□□□□□ -0.33
RDH11-210ENST00000557331 HOOK2Q96ED9 719 aa13□□□□□ -0.33
RDH11-210ENST00000557331 ZCCHC17Q9NP64 241 aaKnown RBP13□□□□□ -0.33
RDH11-210ENST00000557331 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
RDH11-210ENST00000557331 USP2O75604 605 aaPredicted RBP12.99□□□□□ -0.33
RDH11-210ENST00000557331 TNNI2P48788 182 aa12.99□□□□□ -0.33
RDH11-210ENST00000557331 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.33
RDH11-210ENST00000557331 CASP7P55210 303 aa12.99□□□□□ -0.33
RDH11-210ENST00000557331 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
RDH11-210ENST00000557331 RASA3Q14644 834 aa12.99□□□□□ -0.33
RDH11-210ENST00000557331 TSPYL6Q8N831 410 aa12.99□□□□□ -0.33
RDH11-210ENST00000557331 PRMT6Q96LA8 375 aaPredicted RBP12.99□□□□□ -0.33
RDH11-210ENST00000557331 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
RDH11-210ENST00000557331 ZFYVE28Q9HCC9 887 aa12.99□□□□□ -0.33
RDH11-210ENST00000557331 BRCA2P51587 3418 aa12.99□□□□□ -0.33
RDH11-210ENST00000557331 FAM205AQ6ZU69 1335 aa12.98□□□□□ -0.33
RDH11-210ENST00000557331 PRMT2P55345 433 aa12.98□□□□□ -0.33
RDH11-210ENST00000557331 KIF22Q14807 665 aa12.98□□□□□ -0.33
RDH11-210ENST00000557331 CCDC57Q2TAC2 916 aa12.98□□□□□ -0.33
RDH11-210ENST00000557331 CERS5Q8N5B7 392 aa12.98□□□□□ -0.33
RDH11-210ENST00000557331 CLMNQ96JQ2 1002 aa12.98□□□□□ -0.33
RDH11-210ENST00000557331 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 KLRK1P26718 216 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 SPDYE2Q495Y8 402 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 SLC9C1Q4G0N8 1177 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 TAF7LQ5H9L4 462 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
RDH11-210ENST00000557331 LDHAL6AQ6ZMR3 332 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 HELBQ8NG08 1087 aaPredicted RBP12.97□□□□□ -0.33
RDH11-210ENST00000557331 CD99L2Q8TCZ2 262 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 CSADQ9Y600 493 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
RDH11-210ENST00000557331 LAMB1P07942 1786 aa12.97□□□□□ -0.33
RDH11-210ENST00000557331 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
RDH11-210ENST00000557331 CLRN2A0PK11 232 aa12.96□□□□□ -0.33
RDH11-210ENST00000557331 HDLBPQ00341 1268 aaKnown RBP12.96□□□□□ -0.33
RDH11-210ENST00000557331 OPTNQ96CV9 577 aa12.96□□□□□ -0.33
RDH11-210ENST00000557331 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
RDH11-210ENST00000557331 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
RDH11-210ENST00000557331 ECM29Q5VYK3 1845 aa12.96□□□□□ -0.33
RDH11-210ENST00000557331 RBBP6Q7Z6E9 1792 aaKnown RBP12.96□□□□□ -0.34
RDH11-210ENST00000557331 F8W031 263 aaPredicted RBP12.95□□□□□ -0.34
RDH11-210ENST00000557331 TAF5LO75529 589 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 CAPN2P17655 700 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
RDH11-210ENST00000557331 TAF1CQ15572 869 aaPredicted RBP12.95□□□□□ -0.34
RDH11-210ENST00000557331 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 TBC1D22AQ8WUA7 517 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 PTPN18Q99952 460 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 CNNM1Q9NRU3 951 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 ZNF70Q9UC06 446 aaPredicted RBP12.95□□□□□ -0.34
RDH11-210ENST00000557331 TTF2Q9UNY4 1162 aaKnown RBP12.95□□□□□ -0.34
RDH11-210ENST00000557331 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
RDH11-210ENST00000557331 TRIOBPQ9H2D6 2365 aa12.94□□□□□ -0.34
RDH11-210ENST00000557331 CETPP11597 493 aa12.94□□□□□ -0.34
RDH11-210ENST00000557331 EN2P19622 333 aaPredicted RBP12.94□□□□□ -0.34
RDH11-210ENST00000557331 FOXO4P98177 505 aa12.94□□□□□ -0.34
RDH11-210ENST00000557331 SLC4A8Q2Y0W8 1093 aa12.94□□□□□ -0.34
RDH11-210ENST00000557331 FKBP1CQ5VVH2 108 aa12.94□□□□□ -0.34
RDH11-210ENST00000557331 G2E3Q7L622 706 aa12.94□□□□□ -0.34
RDH11-210ENST00000557331 DZIP1LQ8IYY4 767 aaKnown RBP12.94□□□□□ -0.34
RDH11-210ENST00000557331 TDRD7Q8NHU6 1098 aaKnown RBP12.94□□□□□ -0.34
RDH11-210ENST00000557331 TSR2Q969E8 191 aaKnown RBP12.94□□□□□ -0.34
RDH11-210ENST00000557331 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms