RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 CERS5Q8N5B7 392 aa23.63■■□□□ 1.37
PRKCH-223ENST00000557294 SLC9C1Q4G0N8 1177 aa23.62■■□□□ 1.37
PRKCH-223ENST00000557294 CCDC30Q5VVM6 783 aa23.62■■□□□ 1.37
PRKCH-223ENST00000557294 OTUD5Q96G74 571 aa23.62■■□□□ 1.37
PRKCH-223ENST00000557294 PRMT6Q96LA8 375 aaPredicted RBP23.62■■□□□ 1.37
PRKCH-223ENST00000557294 IFT57Q9NWB7 429 aa23.62■■□□□ 1.37
PRKCH-223ENST00000557294 PCDHAC2Q9Y5I4 1007 aa23.62■■□□□ 1.37
PRKCH-223ENST00000557294 LAMB1P07942 1786 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 PI4KAP2A4QPH2 592 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 H7C1W4 665 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 GNAI1P63096 354 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 SLC4A8Q2Y0W8 1093 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 PI4KAP1Q8N8J0 262 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 C8orf58Q8NAV2 365 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 MS4A4AQ96JQ5 239 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 MPHOSPH8Q99549 860 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 ADAMTS8Q9UP79 889 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 SZT2Q5T011 3432 aa23.61■■□□□ 1.37
PRKCH-223ENST00000557294 CLRN2A0PK11 232 aa23.6■■□□□ 1.37
PRKCH-223ENST00000557294 SPDYE2BA6NHP3 402 aa23.6■■□□□ 1.37
PRKCH-223ENST00000557294 H0YGN5 161 aa23.6■■□□□ 1.37
PRKCH-223ENST00000557294 SPDYE6P0CI01 402 aa23.6■■□□□ 1.37
PRKCH-223ENST00000557294 NEXNQ0ZGT2 675 aa23.6■■□□□ 1.37
PRKCH-223ENST00000557294 WDR43Q15061 677 aaKnown RBP eCLIP23.6■■□□□ 1.37
PRKCH-223ENST00000557294 CFAP100Q494V2 611 aa23.6■■□□□ 1.37
PRKCH-223ENST00000557294 PTCH2Q9Y6C5 1203 aa23.6■■□□□ 1.37
PRKCH-223ENST00000557294 ITGA6P23229 1130 aa23.59■■□□□ 1.37
PRKCH-223ENST00000557294 KCNJ4P48050 445 aa23.59■■□□□ 1.37
PRKCH-223ENST00000557294 FKBP1AP62942 108 aaKnown RBP23.59■■□□□ 1.37
PRKCH-223ENST00000557294 RASA3Q14644 834 aa23.59■■□□□ 1.37
PRKCH-223ENST00000557294 OPTNQ96CV9 577 aa23.59■■□□□ 1.37
PRKCH-223ENST00000557294 VEZTQ9HBM0 779 aa23.59■■□□□ 1.37
PRKCH-223ENST00000557294 NEURL1BA8MQ27 555 aa23.58■■□□□ 1.37
PRKCH-223ENST00000557294 CHRNDQ07001 517 aa23.58■■□□□ 1.37
PRKCH-223ENST00000557294 CWF19L2Q2TBE0 894 aaKnown RBP23.58■■□□□ 1.37
PRKCH-223ENST00000557294 C15orf52Q6ZUT6 534 aaKnown RBP23.58■■□□□ 1.37
PRKCH-223ENST00000557294 PLA2G12BQ9BX93 195 aa23.58■■□□□ 1.37
PRKCH-223ENST00000557294 ZFYVE28Q9HCC9 887 aa23.58■■□□□ 1.37
PRKCH-223ENST00000557294 F8W031 263 aaPredicted RBP23.57■■□□□ 1.36
PRKCH-223ENST00000557294 CSF1RP07333 972 aa23.57■■□□□ 1.36
PRKCH-223ENST00000557294 IL1R1P14778 569 aa23.57■■□□□ 1.36
PRKCH-223ENST00000557294 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
PRKCH-223ENST00000557294 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
PRKCH-223ENST00000557294 ELP3Q9H9T3 547 aa23.57■■□□□ 1.36
PRKCH-223ENST00000557294 IRS2Q9Y4H2 1338 aa23.57■■□□□ 1.36
PRKCH-223ENST00000557294 TAF1CQ15572 869 aaPredicted RBP23.55■■□□□ 1.36
PRKCH-223ENST00000557294 BRI3BPQ8WY22 251 aa23.55■■□□□ 1.36
PRKCH-223ENST00000557294 AOX1Q06278 1338 aa23.55■■□□□ 1.36
PRKCH-223ENST00000557294 MYBBP1AQ9BQG0 1328 aaKnown RBP23.55■■□□□ 1.36
PRKCH-223ENST00000557294 SNAP23O00161 211 aa23.54■■□□□ 1.36
PRKCH-223ENST00000557294 GTF2A2P52657 109 aa23.54■■□□□ 1.36
PRKCH-223ENST00000557294 RBM5P52756 815 aaKnown RBP eCLIP23.54■■□□□ 1.36
PRKCH-223ENST00000557294 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.54■■□□□ 1.36
PRKCH-223ENST00000557294 SPEF2Q9C093 1822 aa23.54■■□□□ 1.36
PRKCH-223ENST00000557294 CCL15-CCL14A0A0B4J2E2 113 aa23.53■■□□□ 1.36
PRKCH-223ENST00000557294 TAF5LO75529 589 aa23.53■■□□□ 1.36
PRKCH-223ENST00000557294 TNFAIP1Q13829 316 aa23.53■■□□□ 1.36
PRKCH-223ENST00000557294 CCL15Q16663 113 aa23.53■■□□□ 1.36
PRKCH-223ENST00000557294 MYH3P11055 1940 aa23.53■■□□□ 1.36
PRKCH-223ENST00000557294 MYCP01106 439 aaPredicted RBP23.52■■□□□ 1.36
PRKCH-223ENST00000557294 GCKRQ14397 625 aa23.52■■□□□ 1.36
PRKCH-223ENST00000557294 CHRDL2Q6WN34 429 aa23.52■■□□□ 1.36
PRKCH-223ENST00000557294 ZNF804AQ7Z570 1209 aa23.52■■□□□ 1.36
PRKCH-223ENST00000557294 CASP7P55210 303 aa23.51■■□□□ 1.35
PRKCH-223ENST00000557294 MAP3K9P80192 1104 aa23.51■■□□□ 1.35
PRKCH-223ENST00000557294 FAM43AQ8N2R8 423 aa23.51■■□□□ 1.35
PRKCH-223ENST00000557294 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
PRKCH-223ENST00000557294 SH3TC2Q8TF17 1288 aa23.51■■□□□ 1.35
PRKCH-223ENST00000557294 CNKSR2Q8WXI2 1034 aa23.51■■□□□ 1.35
PRKCH-223ENST00000557294 ANKRD18BA2A2Z9 1011 aa23.5■■□□□ 1.35
PRKCH-223ENST00000557294 WDHD1O75717 1129 aaPredicted RBP23.5■■□□□ 1.35
PRKCH-223ENST00000557294 GNRH1P01148 92 aa23.5■■□□□ 1.35
PRKCH-223ENST00000557294 SPDYE2Q495Y8 402 aa23.5■■□□□ 1.35
PRKCH-223ENST00000557294 HELBQ8NG08 1087 aaPredicted RBP23.5■■□□□ 1.35
PRKCH-223ENST00000557294 TEPSINQ96N21 525 aa23.5■■□□□ 1.35
PRKCH-223ENST00000557294 ZNF70Q9UC06 446 aaPredicted RBP23.5■■□□□ 1.35
PRKCH-223ENST00000557294 ECM29Q5VYK3 1845 aa23.49■■□□□ 1.35
PRKCH-223ENST00000557294 TRIOBPQ9H2D6 2365 aa23.49■■□□□ 1.35
PRKCH-223ENST00000557294 TLR2O60603 784 aa23.49■■□□□ 1.35
PRKCH-223ENST00000557294 KIF22Q14807 665 aa23.49■■□□□ 1.35
PRKCH-223ENST00000557294 STK31Q9BXU1 1019 aa23.49■■□□□ 1.35
PRKCH-223ENST00000557294 RBM27Q9P2N5 1060 aaKnown RBP23.49■■□□□ 1.35
PRKCH-223ENST00000557294 CEP290O15078 2479 aa23.49■■□□□ 1.35
PRKCH-223ENST00000557294 APAF1O14727 1248 aa23.48■■□□□ 1.35
PRKCH-223ENST00000557294 PRMT2P55345 433 aa23.48■■□□□ 1.35
PRKCH-223ENST00000557294 LACTBP83111 547 aaPredicted RBP23.48■■□□□ 1.35
PRKCH-223ENST00000557294 VGLL4Q14135 290 aa23.48■■□□□ 1.35
PRKCH-223ENST00000557294 DPF3Q92784 378 aa23.48■■□□□ 1.35
PRKCH-223ENST00000557294 ARHGAP39Q9C0H5 1083 aa23.48■■□□□ 1.35
PRKCH-223ENST00000557294 SERPINA10Q9UK55 444 aa23.48■■□□□ 1.35
PRKCH-223ENST00000557294 JAG2Q9Y219 1238 aa23.48■■□□□ 1.35
PRKCH-223ENST00000557294 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.47■■□□□ 1.35
PRKCH-223ENST00000557294 TDRD3Q9H7E2 651 aaKnown RBP23.47■■□□□ 1.35
PRKCH-223ENST00000557294 ZCCHC17Q9NP64 241 aaKnown RBP23.47■■□□□ 1.35
PRKCH-223ENST00000557294 RANBP2P49792 3224 aaKnown RBP23.46■■□□□ 1.35
PRKCH-223ENST00000557294 DLL1O00548 723 aa23.46■■□□□ 1.35
PRKCH-223ENST00000557294 FAM205AQ6ZU69 1335 aa23.46■■□□□ 1.35
PRKCH-223ENST00000557294 G2E3Q7L622 706 aa23.46■■□□□ 1.35
PRKCH-223ENST00000557294 CDAN1Q8IWY9 1227 aa23.46■■□□□ 1.35
PRKCH-223ENST00000557294 CSADQ9Y600 493 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms