RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
SRP54-213ENST00000556994 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
SRP54-213ENST00000556994 FKBP4Q02790 459 aaKnown RBP eCLIP13.26□□□□□ -0.29
SRP54-213ENST00000556994 OSBP2Q969R2 916 aa13.26□□□□□ -0.29
SRP54-213ENST00000556994 PALLDQ8WX93 1383 aa13.26□□□□□ -0.29
SRP54-213ENST00000556994 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
SRP54-213ENST00000556994 GSDMDP57764 484 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 SYT10Q6XYQ8 523 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 C8orf76Q96K31 380 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 PUS3Q9BZE2 481 aaKnown RBP13.25□□□□□ -0.29
SRP54-213ENST00000556994 KIF28PB7ZC32 967 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 SLU7O95391 586 aaKnown RBP13.25□□□□□ -0.29
SRP54-213ENST00000556994 SLFN14P0C7P3 912 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 TATP17735 454 aaPredicted RBP13.25□□□□□ -0.29
SRP54-213ENST00000556994 PTPN21Q16825 1174 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 PPP1R13BQ96KQ4 1090 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 OSBPL5Q9H0X9 879 aaPredicted RBP13.25□□□□□ -0.29
SRP54-213ENST00000556994 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 PHRF1Q9P1Y6 1649 aaKnown RBP13.25□□□□□ -0.29
SRP54-213ENST00000556994 NEDD4P46934 1319 aa13.25□□□□□ -0.29
SRP54-213ENST00000556994 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 SPTLC2O15270 562 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 ZNF202O95125 648 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 SLC3A2P08195 630 aaKnown RBP13.24□□□□□ -0.29
SRP54-213ENST00000556994 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
SRP54-213ENST00000556994 MARCKSP29966 332 aaPredicted RBP13.24□□□□□ -0.29
SRP54-213ENST00000556994 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 ERCC6LQ2NKX8 1250 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 KLF18A0A0U1RQI7 1052 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 IFNL2Q8IZJ0 200 aa13.24□□□□□ -0.29
SRP54-213ENST00000556994 ORC3Q9UBD5 711 aaPredicted RBP13.24□□□□□ -0.29
SRP54-213ENST00000556994 A0A1W2PQ27 194 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 A0A1W2PQ64 194 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 A0A1W2PQD8 194 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 CYP27B1O15528 508 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 ATP1A3P13637 1013 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRP54-213ENST00000556994 GORABQ5T7V8 394 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 KRT222Q8N1A0 295 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 H7C1W4 665 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 FOXP2O15409 715 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 PRC1O43663 620 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 NCAPHQ15003 741 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
SRP54-213ENST00000556994 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 FBXO18Q8NFZ0 1043 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
SRP54-213ENST00000556994 ZNF446Q9NWS9 450 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 IMPACTQ9P2X3 320 aa13.23□□□□□ -0.29
SRP54-213ENST00000556994 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
SRP54-213ENST00000556994 FGAP02671 866 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 IL15P40933 162 aaPredicted RBP13.22□□□□□ -0.29
SRP54-213ENST00000556994 CABP4P57796 275 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 NLRP12P59046 1061 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 GABPB1Q06547 395 aaPredicted RBP13.22□□□□□ -0.29
SRP54-213ENST00000556994 GOLGA8FQ08AF8 430 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 GOLGA8DPQ0D2H9 430 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 ZBTB3Q9H5J0 574 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 SLIT3O75094 1523 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 CPLX1O14810 134 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 PFKFB1P16118 471 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 ADORA1P30542 326 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
SRP54-213ENST00000556994 KCND1Q9NSA2 647 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 POLR3EQ9NVU0 708 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 DENND2AQ9ULE3 1009 aa13.22□□□□□ -0.29
SRP54-213ENST00000556994 MEGF6O75095 1541 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 MROH7-TTC4A0A0A0MT08 1334 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 EYA2O00167 538 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 FANCCQ00597 558 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 TERF2Q15554 542 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 CABLES1Q8TDN4 633 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 DPF2Q92785 391 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.29
SRP54-213ENST00000556994 ABCC6O95255 1503 aa13.21□□□□□ -0.29
SRP54-213ENST00000556994 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.3
SRP54-213ENST00000556994 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.3
SRP54-213ENST00000556994 A1BGP04217 495 aa13.21□□□□□ -0.3
SRP54-213ENST00000556994 RXRAP19793 462 aa13.21□□□□□ -0.3
SRP54-213ENST00000556994 ANTXR2P58335 489 aa13.21□□□□□ -0.3
SRP54-213ENST00000556994 IMMTQ16891 758 aaKnown RBP13.21□□□□□ -0.3
SRP54-213ENST00000556994 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.3
SRP54-213ENST00000556994 ANO1Q5XXA6 986 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms