RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 DPP8Q6V1X1 898 aaPredicted RBP28.71■■■□□ 2.19
SIX4-203ENST00000556952 VPS37DQ86XT2 251 aa28.71■■■□□ 2.19
SIX4-203ENST00000556952 RUFY2Q8WXA3 655 aa28.71■■■□□ 2.19
SIX4-203ENST00000556952 WTIPA6NIX2 430 aaPredicted RBP28.71■■■□□ 2.19
SIX4-203ENST00000556952 REC8O95072 547 aa28.71■■■□□ 2.19
SIX4-203ENST00000556952 ZAP70P43403 619 aa28.71■■■□□ 2.19
SIX4-203ENST00000556952 GYG1P46976 350 aa28.71■■■□□ 2.19
SIX4-203ENST00000556952 TTF1Q15361 905 aaPredicted RBP28.71■■■□□ 2.19
SIX4-203ENST00000556952 GRIPAP1Q4V328 841 aa28.71■■■□□ 2.19
SIX4-203ENST00000556952 FBXO33Q7Z6M2 555 aa28.71■■■□□ 2.19
SIX4-203ENST00000556952 FAM84BQ96KN1 310 aaPredicted RBP28.71■■■□□ 2.19
SIX4-203ENST00000556952 RASGRF1Q13972 1273 aa28.7■■■□□ 2.18
SIX4-203ENST00000556952 LRRFIP1Q32MZ4 808 aaKnown RBP28.7■■■□□ 2.18
SIX4-203ENST00000556952 SPATA5Q8NB90 893 aa28.7■■■□□ 2.18
SIX4-203ENST00000556952 SNRKQ9NRH2 765 aa28.7■■■□□ 2.18
SIX4-203ENST00000556952 SEMA3EO15041 775 aa28.69■■■□□ 2.18
SIX4-203ENST00000556952 UFL1O94874 794 aa28.69■■■□□ 2.18
SIX4-203ENST00000556952 RTFDC1Q9BY42 306 aaPredicted RBP28.69■■■□□ 2.18
SIX4-203ENST00000556952 HMG20BQ9P0W2 317 aa28.69■■■□□ 2.18
SIX4-203ENST00000556952 RAD50Q92878 1312 aa28.68■■■□□ 2.18
SIX4-203ENST00000556952 IARSP41252 1262 aaKnown RBP28.68■■■□□ 2.18
SIX4-203ENST00000556952 MED23Q9ULK4 1368 aa28.67■■■□□ 2.18
SIX4-203ENST00000556952 KLRK1P26718 216 aa28.67■■■□□ 2.18
SIX4-203ENST00000556952 HIBADHP31937 336 aaKnown RBP28.67■■■□□ 2.18
SIX4-203ENST00000556952 PI16Q6UXB8 463 aa28.67■■■□□ 2.18
SIX4-203ENST00000556952 MYO5AQ9Y4I1 1855 aaKnown RBP28.67■■■□□ 2.18
SIX4-203ENST00000556952 PDS5AQ29RF7 1337 aaKnown RBP28.67■■■□□ 2.18
SIX4-203ENST00000556952 SGSM2O43147 1006 aa28.67■■■□□ 2.18
SIX4-203ENST00000556952 TBC1D16Q8TBP0 767 aa28.67■■■□□ 2.18
SIX4-203ENST00000556952 ANTXR1Q9H6X2 564 aa28.67■■■□□ 2.18
SIX4-203ENST00000556952 CYP2E1P05181 493 aaPredicted RBP28.66■■■□□ 2.18
SIX4-203ENST00000556952 CWC27Q6UX04 472 aaKnown RBP28.66■■■□□ 2.18
SIX4-203ENST00000556952 TBC1D32Q96NH3 1257 aa28.66■■■□□ 2.18
SIX4-203ENST00000556952 GPR101Q96P66 508 aaPredicted RBP28.66■■■□□ 2.18
SIX4-203ENST00000556952 POLLQ9UGP5 575 aa28.66■■■□□ 2.18
SIX4-203ENST00000556952 DENND2AQ9ULE3 1009 aa28.66■■■□□ 2.18
SIX4-203ENST00000556952 ZNF804AQ7Z570 1209 aa28.65■■■□□ 2.18
SIX4-203ENST00000556952 EPB41L2O43491 1005 aaKnown RBP28.64■■■□□ 2.18
SIX4-203ENST00000556952 ZFYP08048 801 aaPredicted RBP28.64■■■□□ 2.18
SIX4-203ENST00000556952 AOC3Q16853 763 aa28.64■■■□□ 2.18
SIX4-203ENST00000556952 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.64■■■□□ 2.18
SIX4-203ENST00000556952 COL1A1P02452 1464 aaPredicted RBP28.63■■■□□ 2.17
SIX4-203ENST00000556952 NMIQ13287 307 aaPredicted RBP28.63■■■□□ 2.17
SIX4-203ENST00000556952 TXNRD3Q86VQ6 643 aa28.63■■■□□ 2.17
SIX4-203ENST00000556952 SUPT20HQ8NEM7 779 aa28.63■■■□□ 2.17
SIX4-203ENST00000556952 C22orf23Q9BZE7 217 aa28.63■■■□□ 2.17
SIX4-203ENST00000556952 C6orf229H3BNL8 230 aa28.62■■■□□ 2.17
SIX4-203ENST00000556952 PPIP5K2O43314 1243 aa28.62■■■□□ 2.17
SIX4-203ENST00000556952 ZSCAN25Q6NSZ9 544 aa28.62■■■□□ 2.17
SIX4-203ENST00000556952 FAM227BQ96M60 508 aa28.62■■■□□ 2.17
SIX4-203ENST00000556952 LARGE2Q8N3Y3 721 aa28.61■■■□□ 2.17
SIX4-203ENST00000556952 A0A0D9SFI3 127 aa28.6■■■□□ 2.17
SIX4-203ENST00000556952 RNF113AO15541 343 aaKnown RBP28.6■■■□□ 2.17
SIX4-203ENST00000556952 RBM25P49756 843 aaKnown RBP28.6■■■□□ 2.17
SIX4-203ENST00000556952 USP26Q9BXU7 913 aa28.6■■■□□ 2.17
SIX4-203ENST00000556952 IL25Q9H293 177 aa28.6■■■□□ 2.17
SIX4-203ENST00000556952 PIH1D3Q9NQM4 214 aaKnown RBP28.6■■■□□ 2.17
SIX4-203ENST00000556952 ZC3H4Q9UPT8 1303 aaKnown RBP28.6■■■□□ 2.17
SIX4-203ENST00000556952 FRAT2O75474 233 aaPredicted RBP28.59■■■□□ 2.17
SIX4-203ENST00000556952 KIAA2012Q0VF49 1180 aa28.59■■■□□ 2.17
SIX4-203ENST00000556952 ANO2Q9NQ90 1003 aa28.59■■■□□ 2.17
SIX4-203ENST00000556952 HELLSQ9NRZ9 838 aa28.59■■■□□ 2.17
SIX4-203ENST00000556952 IQSEC3Q9UPP2 1182 aaPredicted RBP28.59■■■□□ 2.17
SIX4-203ENST00000556952 MAST2Q6P0Q8 1798 aa28.59■■■□□ 2.17
SIX4-203ENST00000556952 RIMBP2O15034 1052 aa28.58■■■□□ 2.17
SIX4-203ENST00000556952 WASHC4Q2M389 1173 aa28.58■■■□□ 2.17
SIX4-203ENST00000556952 ZMYM1Q5SVZ6 1142 aa28.58■■■□□ 2.17
SIX4-203ENST00000556952 ZNF526Q8TF50 670 aaPredicted RBP28.58■■■□□ 2.17
SIX4-203ENST00000556952 EYA3Q99504 573 aa28.58■■■□□ 2.17
SIX4-203ENST00000556952 ZNF784Q8NCA9 323 aaPredicted RBP28.58■■■□□ 2.17
SIX4-203ENST00000556952 TDRD7Q8NHU6 1098 aaKnown RBP28.58■■■□□ 2.17
SIX4-203ENST00000556952 VPS33BQ9H267 617 aa28.58■■■□□ 2.17
SIX4-203ENST00000556952 MAP3K12Q12852 859 aa28.57■■■□□ 2.16
SIX4-203ENST00000556952 MCMDC2Q4G0Z9 681 aa28.57■■■□□ 2.16
SIX4-203ENST00000556952 KIAA1211Q6ZU35 1233 aa28.57■■■□□ 2.16
SIX4-203ENST00000556952 IDH1O75874 414 aaKnown RBP28.56■■■□□ 2.16
SIX4-203ENST00000556952 JDP2Q8WYK2 163 aa28.56■■■□□ 2.16
SIX4-203ENST00000556952 ZNF541Q9H0D2 1346 aa28.56■■■□□ 2.16
SIX4-203ENST00000556952 IL1R1P14778 569 aa28.55■■■□□ 2.16
SIX4-203ENST00000556952 ADD2P35612 726 aa28.55■■■□□ 2.16
SIX4-203ENST00000556952 ANP32AP39687 249 aaKnown RBP28.55■■■□□ 2.16
SIX4-203ENST00000556952 ZC3H12CQ9C0D7 883 aaKnown RBP28.55■■■□□ 2.16
SIX4-203ENST00000556952 CD209Q9NNX6 404 aa28.55■■■□□ 2.16
SIX4-203ENST00000556952 IGSF3O75054 1194 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 UBE3CQ15386 1083 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 NIM1KQ8IY84 436 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 APPBP2Q92624 585 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 LSG1Q9H089 658 aaKnown RBP28.54■■■□□ 2.16
SIX4-203ENST00000556952 SCN9AQ15858 1988 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 FZD9O00144 591 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 SLC9C2Q5TAH2 1124 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 COA1Q9GZY4 146 aa28.54■■■□□ 2.16
SIX4-203ENST00000556952 SALL1Q9NSC2 1324 aa28.53■■■□□ 2.16
SIX4-203ENST00000556952 ZGPATQ8N5A5 531 aaKnown RBP28.53■■■□□ 2.16
SIX4-203ENST00000556952 LRP2BPQ9P2M1 347 aa28.53■■■□□ 2.16
SIX4-203ENST00000556952 CCDC171Q6TFL3 1326 aa28.53■■■□□ 2.16
SIX4-203ENST00000556952 CHGBP05060 677 aa28.52■■■□□ 2.16
SIX4-203ENST00000556952 PDE6AP16499 860 aa28.52■■■□□ 2.16
SIX4-203ENST00000556952 MCCP23508 829 aa28.52■■■□□ 2.16
SIX4-203ENST00000556952 WDR66Q8TBY9 1149 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms