RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 SASH1O94885 1247 aa16.32■□□□□ 0.2
PSEN1-219ENST00000556951 LRIT3Q3SXY7 679 aa16.32■□□□□ 0.2
PSEN1-219ENST00000556951 STRIP1Q5VSL9 837 aa16.32■□□□□ 0.2
PSEN1-219ENST00000556951 ARMC9Q7Z3E5 817 aa16.32■□□□□ 0.2
PSEN1-219ENST00000556951 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
PSEN1-219ENST00000556951 LAMA2P24043 3122 aaKnown RBP16.31■□□□□ 0.2
PSEN1-219ENST00000556951 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
PSEN1-219ENST00000556951 MANSC4A6NHS7 340 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-219ENST00000556951 IGF2BP3O00425 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
PSEN1-219ENST00000556951 NF2P35240 595 aa16.31■□□□□ 0.2
PSEN1-219ENST00000556951 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
PSEN1-219ENST00000556951 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
PSEN1-219ENST00000556951 BMP8BP34820 402 aa16.3■□□□□ 0.2
PSEN1-219ENST00000556951 CCT4P50991 539 aaKnown RBP16.3■□□□□ 0.2
PSEN1-219ENST00000556951 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
PSEN1-219ENST00000556951 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
PSEN1-219ENST00000556951 TTLL11Q8NHH1 800 aa16.3■□□□□ 0.2
PSEN1-219ENST00000556951 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
PSEN1-219ENST00000556951 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
PSEN1-219ENST00000556951 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
PSEN1-219ENST00000556951 CRHR2Q13324 411 aa16.29■□□□□ 0.2
PSEN1-219ENST00000556951 SH3TC2Q8TF17 1288 aa16.29■□□□□ 0.2
PSEN1-219ENST00000556951 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
PSEN1-219ENST00000556951 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
PSEN1-219ENST00000556951 CLMNQ96JQ2 1002 aa16.29■□□□□ 0.2
PSEN1-219ENST00000556951 METTL22Q9BUU2 404 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-219ENST00000556951 COA1Q9GZY4 146 aa16.29■□□□□ 0.2
PSEN1-219ENST00000556951 MBIPQ9NS73 344 aa16.29■□□□□ 0.2
PSEN1-219ENST00000556951 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-219ENST00000556951 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
PSEN1-219ENST00000556951 MMP14P50281 582 aa16.28■□□□□ 0.2
PSEN1-219ENST00000556951 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
PSEN1-219ENST00000556951 ARHGEF6Q15052 776 aa16.28■□□□□ 0.2
PSEN1-219ENST00000556951 SNX27Q96L92 541 aa16.28■□□□□ 0.2
PSEN1-219ENST00000556951 GDF15Q99988 308 aa16.28■□□□□ 0.2
PSEN1-219ENST00000556951 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 KLRK1P26718 216 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 GJA5P36382 358 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 CTSWP56202 376 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
PSEN1-219ENST00000556951 KIAA0825Q8IV33 1275 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 WNK4Q96J92 1243 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 GREM2Q9H772 168 aa16.27■□□□□ 0.2
PSEN1-219ENST00000556951 SSC5DA1L4H1 1573 aa16.26■□□□□ 0.19
PSEN1-219ENST00000556951 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-219ENST00000556951 BCAMP50895 628 aa16.26■□□□□ 0.19
PSEN1-219ENST00000556951 FBXW7Q969H0 707 aa16.26■□□□□ 0.19
PSEN1-219ENST00000556951 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
PSEN1-219ENST00000556951 PTPN18Q99952 460 aa16.26■□□□□ 0.19
PSEN1-219ENST00000556951 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
PSEN1-219ENST00000556951 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
PSEN1-219ENST00000556951 EVI5O60447 810 aa16.25■□□□□ 0.19
PSEN1-219ENST00000556951 ZBTB48P10074 688 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-219ENST00000556951 CERS5Q8N5B7 392 aa16.25■□□□□ 0.19
PSEN1-219ENST00000556951 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
PSEN1-219ENST00000556951 LEMD3Q9Y2U8 911 aa16.25■□□□□ 0.19
PSEN1-219ENST00000556951 TESPA1A2RU30 521 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-219ENST00000556951 TNFRSF10AO00220 468 aa16.24■□□□□ 0.19
PSEN1-219ENST00000556951 USP2O75604 605 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-219ENST00000556951 GTF2IP78347 998 aa16.24■□□□□ 0.19
PSEN1-219ENST00000556951 MTFR1Q15390 333 aa16.24■□□□□ 0.19
PSEN1-219ENST00000556951 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
PSEN1-219ENST00000556951 MTMR14Q8NCE2 650 aa16.24■□□□□ 0.19
PSEN1-219ENST00000556951 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
PSEN1-219ENST00000556951 AOX1Q06278 1338 aa16.23■□□□□ 0.19
PSEN1-219ENST00000556951 SYNGAP1Q96PV0 1343 aa16.23■□□□□ 0.19
PSEN1-219ENST00000556951 IRS2Q9Y4H2 1338 aa16.23■□□□□ 0.19
PSEN1-219ENST00000556951 GJA8P48165 433 aa16.23■□□□□ 0.19
PSEN1-219ENST00000556951 MAP3K2Q9Y2U5 619 aa16.23■□□□□ 0.19
PSEN1-219ENST00000556951 ZNF804BA4D1E1 1349 aa16.22■□□□□ 0.19
PSEN1-219ENST00000556951 ALPK3Q96L96 1907 aa16.22■□□□□ 0.19
PSEN1-219ENST00000556951 TMEM265A0A087WTH1 108 aa16.22■□□□□ 0.19
PSEN1-219ENST00000556951 UNCXA6NJT0 531 aa16.22■□□□□ 0.19
PSEN1-219ENST00000556951 H7C1W4 665 aa16.22■□□□□ 0.19
PSEN1-219ENST00000556951 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
PSEN1-219ENST00000556951 NBPF12Q5TAG4 269 aaPredicted RBP16.22■□□□□ 0.19
PSEN1-219ENST00000556951 OTUD7BQ6GQQ9 843 aa16.22■□□□□ 0.19
PSEN1-219ENST00000556951 SNAP23O00161 211 aa16.21■□□□□ 0.19
PSEN1-219ENST00000556951 DLGAP5Q15398 846 aa16.21■□□□□ 0.19
PSEN1-219ENST00000556951 PRMT6Q96LA8 375 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-219ENST00000556951 CD209Q9NNX6 404 aa16.21■□□□□ 0.19
PSEN1-219ENST00000556951 CACNA1AO00555 2505 aa16.21■□□□□ 0.19
PSEN1-219ENST00000556951 COL1A1P02452 1464 aaPredicted RBP16.21■□□□□ 0.19
PSEN1-219ENST00000556951 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
PSEN1-219ENST00000556951 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
PSEN1-219ENST00000556951 GJB1P08034 283 aa16.2■□□□□ 0.18
PSEN1-219ENST00000556951 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
PSEN1-219ENST00000556951 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
PSEN1-219ENST00000556951 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
PSEN1-219ENST00000556951 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
PSEN1-219ENST00000556951 ZSWIM8A7E2V4 1837 aa16.19■□□□□ 0.18
PSEN1-219ENST00000556951 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
PSEN1-219ENST00000556951 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-219ENST00000556951 FAM109BQ6ICB4 259 aaPredicted RBP16.19■□□□□ 0.18
PSEN1-219ENST00000556951 TDHQ8IZJ6 230 aa16.19■□□□□ 0.18
PSEN1-219ENST00000556951 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
PSEN1-219ENST00000556951 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms