RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 TXNRD3Q86VQ6 643 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 LARGE2Q8N3Y3 721 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM260-213ENST00000556929 ZNF512BQ96KM6 892 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-213ENST00000556929 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
TMEM260-213ENST00000556929 AOX1Q06278 1338 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 SEMA3EO15041 775 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 ATP5JP18859 108 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 KLRK1P26718 216 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-213ENST00000556929 PHKA1P46020 1223 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 RGS3P49796 1198 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 AOC3Q16853 763 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-213ENST00000556929 ZNF277Q9NRM2 450 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-213ENST00000556929 DENND2AQ9ULE3 1009 aa11.87□□□□□ -0.51
TMEM260-213ENST00000556929 HAX1O00165 279 aa11.86□□□□□ -0.51
TMEM260-213ENST00000556929 GLRX3O76003 335 aaKnown RBP11.86□□□□□ -0.51
TMEM260-213ENST00000556929 IL1R1P14778 569 aa11.86□□□□□ -0.51
TMEM260-213ENST00000556929 RASSF7Q02833 373 aa11.86□□□□□ -0.51
TMEM260-213ENST00000556929 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
TMEM260-213ENST00000556929 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
TMEM260-213ENST00000556929 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
TMEM260-213ENST00000556929 MYH7P12883 1935 aa11.86□□□□□ -0.51
TMEM260-213ENST00000556929 ECE2O60344 883 aa11.85□□□□□ -0.51
TMEM260-213ENST00000556929 LMNB1P20700 586 aa11.85□□□□□ -0.51
TMEM260-213ENST00000556929 DOK7Q18PE1 504 aa11.85□□□□□ -0.51
TMEM260-213ENST00000556929 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
TMEM260-213ENST00000556929 PI4K2BQ8TCG2 481 aa11.85□□□□□ -0.51
TMEM260-213ENST00000556929 BOLA2Q9H3K6 86 aa11.85□□□□□ -0.51
TMEM260-213ENST00000556929 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
TMEM260-213ENST00000556929 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
TMEM260-213ENST00000556929 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
TMEM260-213ENST00000556929 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
TMEM260-213ENST00000556929 MCAMP43121 646 aa11.84□□□□□ -0.51
TMEM260-213ENST00000556929 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
TMEM260-213ENST00000556929 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
TMEM260-213ENST00000556929 SPATA5Q8NB90 893 aa11.84□□□□□ -0.51
TMEM260-213ENST00000556929 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
TMEM260-213ENST00000556929 PDS5AQ29RF7 1337 aaKnown RBP11.84□□□□□ -0.51
TMEM260-213ENST00000556929 RASGRF1Q13972 1273 aa11.83□□□□□ -0.52
TMEM260-213ENST00000556929 TTF1Q15361 905 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-213ENST00000556929 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
TMEM260-213ENST00000556929 ZGPATQ8N5A5 531 aaKnown RBP11.83□□□□□ -0.52
TMEM260-213ENST00000556929 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
TMEM260-213ENST00000556929 DNAJC2Q99543 621 aaKnown RBP11.83□□□□□ -0.52
TMEM260-213ENST00000556929 HAUS7Q99871 368 aa11.83□□□□□ -0.52
TMEM260-213ENST00000556929 HMG20BQ9P0W2 317 aa11.83□□□□□ -0.52
TMEM260-213ENST00000556929 ZNRF3Q9ULT6 936 aa11.83□□□□□ -0.52
TMEM260-213ENST00000556929 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.52
TMEM260-213ENST00000556929 SCN9AQ15858 1988 aa11.83□□□□□ -0.52
TMEM260-213ENST00000556929 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 ZAP70P43403 619 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
TMEM260-213ENST00000556929 GTF2IP78347 998 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
TMEM260-213ENST00000556929 SCARF1Q14162 830 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 TTLL5Q6EMB2 1281 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 TBC1D22AQ8WUA7 517 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 FBXW7Q969H0 707 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 PAG1Q9NWQ8 432 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 FAM205AQ6ZU69 1335 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
TMEM260-213ENST00000556929 COL4A5P29400 1685 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 USP17L3A6NCW0 530 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 USP17L4A6NCW7 530 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 GOLIM4O00461 696 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 MAP4K4O95819 1239 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-213ENST00000556929 PRELPP51888 382 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 STRIP1Q5VSL9 837 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 SPTY2D1Q68D10 685 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-213ENST00000556929 USP17L1Q7RTZ2 530 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-213ENST00000556929 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 EVI5LQ96CN4 794 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 RNF181Q9P0P0 153 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 SALL1Q9NSC2 1324 aa11.81□□□□□ -0.52
TMEM260-213ENST00000556929 IGSF3O75054 1194 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-213ENST00000556929 FKBP1AP62942 108 aaKnown RBP11.8□□□□□ -0.52
TMEM260-213ENST00000556929 TNIP1Q15025 636 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 LRRFIP1Q32MZ4 808 aaKnown RBP11.8□□□□□ -0.52
TMEM260-213ENST00000556929 BMP2KLQ5H9B9 411 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 CIAPIN1Q6FI81 312 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 ZSCAN25Q6NSZ9 544 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 PI16Q6UXB8 463 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 NDUFB9Q9Y6M9 179 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 COL1A1P02452 1464 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-213ENST00000556929 MYO3BQ8WXR4 1341 aa11.8□□□□□ -0.52
TMEM260-213ENST00000556929 YDJCA8MPS7 323 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 FZD9O00144 591 aa11.79□□□□□ -0.52
TMEM260-213ENST00000556929 RAD17O75943 681 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms