RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 COG6Q9Y2V7 657 aa28.37■■■□□ 2.13
TDP1-216ENST00000556867 TRPM7Q96QT4 1865 aa28.36■■■□□ 2.13
TDP1-216ENST00000556867 POLR2AP24928 1970 aaKnown RBP28.35■■■□□ 2.13
TDP1-216ENST00000556867 BCAMP50895 628 aa28.35■■■□□ 2.13
TDP1-216ENST00000556867 HTRA3P83110 453 aa28.35■■■□□ 2.13
TDP1-216ENST00000556867 KIAA0825Q8IV33 1275 aa28.35■■■□□ 2.13
TDP1-216ENST00000556867 MYH13Q9UKX3 1938 aa28.35■■■□□ 2.13
TDP1-216ENST00000556867 CREBZFQ9NS37 354 aa28.34■■■□□ 2.13
TDP1-216ENST00000556867 JAG2Q9Y219 1238 aa28.34■■■□□ 2.13
TDP1-216ENST00000556867 C20orf194Q5TEA3 1177 aa28.33■■■□□ 2.13
TDP1-216ENST00000556867 CEP85Q6P2H3 762 aa28.33■■■□□ 2.13
TDP1-216ENST00000556867 GLIS2Q9BZE0 524 aaPredicted RBP28.33■■■□□ 2.13
TDP1-216ENST00000556867 HDAC9Q9UKV0 1011 aa28.33■■■□□ 2.13
TDP1-216ENST00000556867 TFCP2Q12800 502 aa28.32■■■□□ 2.12
TDP1-216ENST00000556867 G3BP1Q13283 466 aaKnown RBP eCLIP28.32■■■□□ 2.12
TDP1-216ENST00000556867 CDC37L1Q7L3B6 337 aa28.32■■■□□ 2.12
TDP1-216ENST00000556867 CHMP4BQ9H444 224 aaKnown RBP28.32■■■□□ 2.12
TDP1-216ENST00000556867 ZBTB40Q9NUA8 1239 aa28.32■■■□□ 2.12
TDP1-216ENST00000556867 GGA3Q9NZ52 723 aa28.32■■■□□ 2.12
TDP1-216ENST00000556867 IQSEC3Q9UPP2 1182 aaPredicted RBP28.32■■■□□ 2.12
TDP1-216ENST00000556867 TRAF5O00463 557 aa28.31■■■□□ 2.12
TDP1-216ENST00000556867 SCARF1Q14162 830 aa28.31■■■□□ 2.12
TDP1-216ENST00000556867 MFSD14BQ5SR56 506 aa28.31■■■□□ 2.12
TDP1-216ENST00000556867 AKAP2Q9Y2D5 859 aa28.31■■■□□ 2.12
TDP1-216ENST00000556867 ASTN2O75129 1339 aaPredicted RBP28.3■■■□□ 2.12
TDP1-216ENST00000556867 TMEM88BA6NKF7 163 aa28.3■■■□□ 2.12
TDP1-216ENST00000556867 FRAT2O75474 233 aaPredicted RBP28.3■■■□□ 2.12
TDP1-216ENST00000556867 DNAJC5GQ8N7S2 189 aa28.3■■■□□ 2.12
TDP1-216ENST00000556867 DCPSQ96C86 337 aaKnown RBP28.3■■■□□ 2.12
TDP1-216ENST00000556867 FMR1Q06787 632 aaKnown RBP eCLIP28.29■■■□□ 2.12
TDP1-216ENST00000556867 NOP58Q9Y2X3 529 aaKnown RBP28.29■■■□□ 2.12
TDP1-216ENST00000556867 PITPNM2Q9BZ72 1349 aa28.28■■■□□ 2.12
TDP1-216ENST00000556867 WNT10BO00744 389 aa28.28■■■□□ 2.12
TDP1-216ENST00000556867 KRT26Q7Z3Y9 468 aa28.28■■■□□ 2.12
TDP1-216ENST00000556867 TBC1D22AQ8WUA7 517 aa28.28■■■□□ 2.12
TDP1-216ENST00000556867 ZBED3Q96IU2 234 aaPredicted RBP28.28■■■□□ 2.12
TDP1-216ENST00000556867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.28■■■□□ 2.12
TDP1-216ENST00000556867 A0A1B0GUL7 405 aa28.27■■■□□ 2.12
TDP1-216ENST00000556867 ZBTB22O15209 634 aa28.27■■■□□ 2.12
TDP1-216ENST00000556867 ADORA1P30542 326 aa28.27■■■□□ 2.12
TDP1-216ENST00000556867 CHAF1AQ13111 956 aaPredicted RBP28.27■■■□□ 2.12
TDP1-216ENST00000556867 NBPF9Q3BBW0 867 aa28.27■■■□□ 2.12
TDP1-216ENST00000556867 ANGEL2Q5VTE6 544 aaKnown RBP28.27■■■□□ 2.12
TDP1-216ENST00000556867 COL1A1P02452 1464 aaPredicted RBP28.27■■■□□ 2.12
TDP1-216ENST00000556867 F8W031 263 aaPredicted RBP28.26■■■□□ 2.11
TDP1-216ENST00000556867 SURF6O75683 361 aaKnown RBP28.26■■■□□ 2.11
TDP1-216ENST00000556867 TIMM10P62072 90 aa28.26■■■□□ 2.11
TDP1-216ENST00000556867 USP48Q86UV5 1035 aa28.26■■■□□ 2.11
TDP1-216ENST00000556867 MTMR14Q8NCE2 650 aa28.26■■■□□ 2.11
TDP1-216ENST00000556867 GNL3LQ9NVN8 582 aaKnown RBP28.26■■■□□ 2.11
TDP1-216ENST00000556867 ECM29Q5VYK3 1845 aa28.26■■■□□ 2.11
TDP1-216ENST00000556867 PHKA1P46020 1223 aa28.25■■■□□ 2.11
TDP1-216ENST00000556867 SULF1Q8IWU6 871 aa28.25■■■□□ 2.11
TDP1-216ENST00000556867 KLRG1Q96E93 195 aa28.25■■■□□ 2.11
TDP1-216ENST00000556867 ADM5C9JUS6 153 aa28.24■■■□□ 2.11
TDP1-216ENST00000556867 SEMA3EO15041 775 aa28.24■■■□□ 2.11
TDP1-216ENST00000556867 OS9Q13438 667 aaPredicted RBP28.24■■■□□ 2.11
TDP1-216ENST00000556867 DLGAP5Q15398 846 aa28.24■■■□□ 2.11
TDP1-216ENST00000556867 CST9Q5W186 159 aa28.24■■■□□ 2.11
TDP1-216ENST00000556867 CCDC102BQ68D86 513 aa28.24■■■□□ 2.11
TDP1-216ENST00000556867 RPAP2Q8IXW5 612 aaPredicted RBP28.24■■■□□ 2.11
TDP1-216ENST00000556867 XAGE2Q96GT9 111 aa28.24■■■□□ 2.11
TDP1-216ENST00000556867 RRP1P56182 461 aaKnown RBP28.23■■■□□ 2.11
TDP1-216ENST00000556867 GPR108Q9NPR9 543 aa28.23■■■□□ 2.11
TDP1-216ENST00000556867 TTF2Q9UNY4 1162 aaKnown RBP28.23■■■□□ 2.11
TDP1-216ENST00000556867 CELF2O95319 508 aaKnown RBP28.22■■■□□ 2.11
TDP1-216ENST00000556867 CFAP100Q494V2 611 aa28.22■■■□□ 2.11
TDP1-216ENST00000556867 WDR66Q8TBY9 1149 aa28.22■■■□□ 2.11
TDP1-216ENST00000556867 SUGT1Q9Y2Z0 365 aa28.22■■■□□ 2.11
TDP1-216ENST00000556867 GRIK5Q16478 980 aa28.21■■■□□ 2.11
TDP1-216ENST00000556867 SERPINA10Q9UK55 444 aa28.21■■■□□ 2.11
TDP1-216ENST00000556867 DENND2AQ9ULE3 1009 aa28.21■■■□□ 2.11
TDP1-216ENST00000556867 SPDYE2BA6NHP3 402 aa28.2■■■□□ 2.1
TDP1-216ENST00000556867 SPDYE6P0CI01 402 aa28.2■■■□□ 2.1
TDP1-216ENST00000556867 DLK2Q6UY11 383 aa28.2■■■□□ 2.1
TDP1-216ENST00000556867 NEUROD6Q96NK8 337 aa28.2■■■□□ 2.1
TDP1-216ENST00000556867 CNTNAP1P78357 1384 aa28.2■■■□□ 2.1
TDP1-216ENST00000556867 HMMRO75330 724 aa28.19■■■□□ 2.1
TDP1-216ENST00000556867 TNNI3KQ59H18 835 aa28.19■■■□□ 2.1
TDP1-216ENST00000556867 SIRT2Q8IXJ6 389 aa28.19■■■□□ 2.1
TDP1-216ENST00000556867 PCDHAC2Q9Y5I4 1007 aa28.19■■■□□ 2.1
TDP1-216ENST00000556867 FPGT-TNNI3KV9GXZ4 949 aa28.19■■■□□ 2.1
TDP1-216ENST00000556867 PDS5AQ29RF7 1337 aaKnown RBP28.18■■■□□ 2.1
TDP1-216ENST00000556867 SALL1Q9NSC2 1324 aa28.18■■■□□ 2.1
TDP1-216ENST00000556867 HDLBPQ00341 1268 aaKnown RBP28.18■■■□□ 2.1
TDP1-216ENST00000556867 RASGRF1Q13972 1273 aa28.18■■■□□ 2.1
TDP1-216ENST00000556867 APOBEC3FQ8IUX4 373 aaKnown RBP28.18■■■□□ 2.1
TDP1-216ENST00000556867 ZNF408Q9H9D4 720 aa28.18■■■□□ 2.1
TDP1-216ENST00000556867 ABT1Q9ULW3 272 aaKnown RBP28.18■■■□□ 2.1
TDP1-216ENST00000556867 MAST3O60307 1309 aa28.18■■■□□ 2.1
TDP1-216ENST00000556867 RASSF10A6NK89 507 aa28.17■■■□□ 2.1
TDP1-216ENST00000556867 ERC1Q8IUD2 1116 aa28.17■■■□□ 2.1
TDP1-216ENST00000556867 CDCA5Q96FF9 252 aa28.17■■■□□ 2.1
TDP1-216ENST00000556867 PRMT6Q96LA8 375 aaPredicted RBP28.17■■■□□ 2.1
TDP1-216ENST00000556867 MKRN1Q9UHC7 482 aaKnown RBP28.17■■■□□ 2.1
TDP1-216ENST00000556867 EXOC6BQ9Y2D4 811 aa28.17■■■□□ 2.1
TDP1-216ENST00000556867 TLL2Q9Y6L7 1015 aa28.17■■■□□ 2.1
TDP1-216ENST00000556867 CRKP46108 304 aa28.16■■■□□ 2.1
TDP1-216ENST00000556867 RBM5P52756 815 aaKnown RBP eCLIP28.16■■■□□ 2.1
TDP1-216ENST00000556867 HSP90AB4PQ58FF6 505 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms