RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 RGS9O75916 674 aaPredicted RBP6.79□□□□□ -1.32
CDKN3-210ENST00000556305 ACPPP15309 386 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 PPP2R3AQ06190 1150 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 LDLRAD1Q5T700 205 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 SV2BQ7L1I2 683 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 USP48Q86UV5 1035 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 KRTAP1-3Q8IUG1 177 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 ZNF654Q8IZM8 581 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 SAMM50Q9Y512 469 aa6.79□□□□□ -1.32
CDKN3-210ENST00000556305 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.79□□□□□ -1.32
CDKN3-210ENST00000556305 NFKBIEO00221 500 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 GRIA4P48058 902 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 PERM1Q5SV97 790 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 PSAPL1Q6NUJ1 521 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 METTL16Q86W50 562 aaKnown RBP6.78□□□□□ -1.32
CDKN3-210ENST00000556305 FCHSD1Q86WN1 690 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 RELL1Q8IUW5 271 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 TTC9Q92623 222 aa6.78□□□□□ -1.32
CDKN3-210ENST00000556305 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
CDKN3-210ENST00000556305 GPN3Q9UHW5 284 aaPredicted RBP6.78□□□□□ -1.32
CDKN3-210ENST00000556305 TRPA1O75762 1119 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 LMNB1P20700 586 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 HNRNPUQ00839 825 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDKN3-210ENST00000556305 FAM117BQ6P1L5 589 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 TPTE2Q6XPS3 522 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 Q8N3U1 123 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 DCAF5Q96JK2 942 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 MUC3BQ9H195 1237 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 ZNF576Q9H609 170 aa6.77□□□□□ -1.33
CDKN3-210ENST00000556305 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
CDKN3-210ENST00000556305 METTL12A8MUP2 240 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 EPXP11678 715 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 CDC27P30260 824 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 SF3A1Q15459 793 aaKnown RBP6.76□□□□□ -1.33
CDKN3-210ENST00000556305 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 HHIPQ96QV1 700 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 POP1Q99575 1024 aaKnown RBP6.76□□□□□ -1.33
CDKN3-210ENST00000556305 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 LACRTQ9GZZ8 138 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 ADAM19Q9H013 955 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 JPH1Q9HDC5 661 aaPredicted RBP6.76□□□□□ -1.33
CDKN3-210ENST00000556305 KLF15Q9UIH9 416 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 NAGPAQ9UK23 515 aa6.76□□□□□ -1.33
CDKN3-210ENST00000556305 LILRB5O75023 590 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 ARL4DP49703 201 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 PCDH1Q08174 1060 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 NAALADL2Q58DX5 795 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 GDF6Q6KF10 455 aaPredicted RBP6.75□□□□□ -1.33
CDKN3-210ENST00000556305 MDFIQ99750 246 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 RSRP1Q9BUV0 290 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 LRRC4BQ9NT99 713 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 TMEM39AQ9NV64 488 aa6.75□□□□□ -1.33
CDKN3-210ENST00000556305 FBXO24O75426 580 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 AMPD1P23109 780 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 MAP3K10Q02779 954 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 RAD51AP2Q09MP3 1159 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 IKBKEQ14164 716 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 LYPD4Q6UWN0 246 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 ERMP1Q7Z2K6 904 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 GALNT6Q8NCL4 622 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 NUDT8Q8WV74 236 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 EDARADDQ8WWZ3 215 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 SEC31BQ9NQW1 1179 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 DDX41Q9UJV9 622 aaKnown RBP6.74□□□□□ -1.33
CDKN3-210ENST00000556305 SOX13Q9UN79 622 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 TRIM33Q9UPN9 1127 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 INPP5FQ9Y2H2 1132 aa6.74□□□□□ -1.33
CDKN3-210ENST00000556305 H3BRJ5 948 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 K7ELQ4 463 aaPredicted RBP6.73□□□□□ -1.33
CDKN3-210ENST00000556305 B3GALT4O96024 378 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 BCRP11274 1271 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 GBP2P32456 591 aaPredicted RBP6.73□□□□□ -1.33
CDKN3-210ENST00000556305 ZNF394Q53GI3 561 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 DCAF11Q8TEB1 546 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 SREK1Q8WXA9 508 aaKnown RBP6.73□□□□□ -1.33
CDKN3-210ENST00000556305 NECAB3Q96P71 396 aaPredicted RBP6.73□□□□□ -1.33
CDKN3-210ENST00000556305 EMILIN2Q9BXX0 1053 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 CAPN10Q9HC96 672 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
CDKN3-210ENST00000556305 OIP5O43482 229 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 LIG3P49916 1009 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 RPS26P62854 115 aaKnown RBP6.72□□□□□ -1.33
CDKN3-210ENST00000556305 LRRC14Q15048 493 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 CHSY3Q70JA7 882 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 WFDC8Q8IUA0 241 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 WNT8BQ93098 351 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 ACDQ96AP0 544 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 SPATA32Q96LK8 384 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 TMEM74Q96NL1 305 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 ENAMQ9NRM1 1142 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 KBTBD4Q9NVX7 518 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 PPME1Q9Y570 386 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 PCDHGB7Q9Y5F8 929 aa6.72□□□□□ -1.33
CDKN3-210ENST00000556305 M0R082 166 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 CELA2BP08218 269 aaPredicted RBP6.71□□□□□ -1.34
CDKN3-210ENST00000556305 CELA3AP09093 270 aa6.71□□□□□ -1.34
CDKN3-210ENST00000556305 PIP4K2BP78356 416 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms