RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ANKRD18AQ8IVF6 992 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 TBC1D16Q8TBP0 767 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 GLIS2Q9BZE0 524 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-216ENST00000556066 ZC3H12CQ9C0D7 883 aaKnown RBP8.57□□□□□ -1.04
PSEN1-216ENST00000556066 ZNF408Q9H9D4 720 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 KCNQ5Q9NR82 932 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 IL16Q14005 1332 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 CDHR2Q9BYE9 1310 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
PSEN1-216ENST00000556066 CELF2O95319 508 aaKnown RBP8.56□□□□□ -1.04
PSEN1-216ENST00000556066 IGKV5-2P06315 115 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 HIRAP54198 1017 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-216ENST00000556066 CTSWP56202 376 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 CAMK2BQ13554 666 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 TBC1D10BQ4KMP7 808 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-216ENST00000556066 RBM26Q5T8P6 1007 aaKnown RBP8.56□□□□□ -1.04
PSEN1-216ENST00000556066 CST9Q5W186 159 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 SAMD7Q7Z3H4 446 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 UBE3BQ7Z3V4 1068 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 GGA1Q9UJY5 639 aa8.56□□□□□ -1.04
PSEN1-216ENST00000556066 FANCIQ9NVI1 1328 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 PSME4Q14997 1843 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 NEURL1BA8MQ27 555 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 FOXK1P85037 733 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 FLIIQ13045 1269 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 FKBP5Q13451 457 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-216ENST00000556066 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 CYP4F22Q6NT55 531 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 FAM9BQ8IZU0 186 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 TMC2Q8TDI7 906 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 DPF2Q92785 391 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 CAPNS2Q96L46 248 aa8.55□□□□□ -1.04
PSEN1-216ENST00000556066 CDC5LQ99459 802 aaKnown RBP8.55□□□□□ -1.04
PSEN1-216ENST00000556066 XDHP47989 1333 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 TNRC18O15417 2968 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-216ENST00000556066 RTL9Q8NET4 1388 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 RPS12P25398 132 aaKnown RBP8.54□□□□□ -1.04
PSEN1-216ENST00000556066 ECE1P42892 770 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 MAP2K1Q02750 393 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-216ENST00000556066 EXOSC9Q06265 439 aaKnown RBP8.54□□□□□ -1.04
PSEN1-216ENST00000556066 DSG2Q14126 1118 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 CDC37L1Q7L3B6 337 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 USP48Q86UV5 1035 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 TTLL11Q8NHH1 800 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
PSEN1-216ENST00000556066 GREM2Q9H772 168 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
PSEN1-216ENST00000556066 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 WTIPA6NIX2 430 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-216ENST00000556066 CCDC85CA6NKD9 419 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 EGFRP00533 1210 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 ATP2B4P23634 1241 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-216ENST00000556066 DLK2Q6UY11 383 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 KRT26Q7Z3Y9 468 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 WDR63Q8IWG1 891 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 DNAAF4Q8WXU2 420 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 DCPSQ96C86 337 aaKnown RBP8.53□□□□□ -1.04
PSEN1-216ENST00000556066 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 PGAP2Q9UHJ9 254 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 LHX6Q9UPM6 363 aa8.53□□□□□ -1.04
PSEN1-216ENST00000556066 ARIH1Q9Y4X5 557 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-216ENST00000556066 F6X3S4 739 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 H7C1W4 665 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 ARHGAP33O14559 1287 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 AOC2O75106 756 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 VAMP4O75379 141 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 VIL1P09327 827 aaKnown RBP8.52□□□□□ -1.05
PSEN1-216ENST00000556066 IGHMBP2P38935 993 aaKnown RBP8.52□□□□□ -1.05
PSEN1-216ENST00000556066 GCKRQ14397 625 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 KIF4BQ2VIQ3 1234 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 RSBN1LQ6PCB5 846 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-216ENST00000556066 SAPCD2Q86UD0 394 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 FBXW7Q969H0 707 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 BSDC1Q9NW68 430 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-216ENST00000556066 MINPP1Q9UNW1 487 aa8.52□□□□□ -1.05
PSEN1-216ENST00000556066 THSD7BQ9C0I4 1608 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 ADM5C9JUS6 153 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 ITGA6P23229 1130 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 CCT4P50991 539 aaKnown RBP8.51□□□□□ -1.05
PSEN1-216ENST00000556066 ADGRD1Q6QNK2 874 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 LINS1Q8NG48 757 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 MPHOSPH8Q99549 860 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 GGA3Q9NZ52 723 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 CHMP3Q9Y3E7 222 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 PCDHGA4Q9Y5G9 962 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 CASP8AP2Q9UKL3 1982 aa8.51□□□□□ -1.05
PSEN1-216ENST00000556066 ASTN2O75129 1339 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-216ENST00000556066 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
PSEN1-216ENST00000556066 KCNJ4P48050 445 aa8.5□□□□□ -1.05
PSEN1-216ENST00000556066 HUNKP57058 714 aa8.5□□□□□ -1.05
PSEN1-216ENST00000556066 PODNQ7Z5L7 613 aa8.5□□□□□ -1.05
PSEN1-216ENST00000556066 C2orf69Q8N8R5 385 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms