RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ZGPATQ8N5A5 531 aaKnown RBP9.33□□□□□ -0.92
TDP1-214ENST00000556063 FBXW7Q969H0 707 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 LNPKQ9C0E8 428 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 ECHDC1Q9NTX5 307 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.33□□□□□ -0.92
TDP1-214ENST00000556063 ARAP2Q8WZ64 1704 aa9.33□□□□□ -0.92
TDP1-214ENST00000556063 FAM205AQ6ZU69 1335 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 MYO3BQ8WXR4 1341 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 RPS12P25398 132 aaKnown RBP9.32□□□□□ -0.92
TDP1-214ENST00000556063 ARID4AP29374 1257 aaPredicted RBP9.32□□□□□ -0.92
TDP1-214ENST00000556063 MMP14P50281 582 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 FKBP1AP62942 108 aaKnown RBP9.32□□□□□ -0.92
TDP1-214ENST00000556063 GTF2IP78347 998 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 CHAF1AQ13111 956 aaPredicted RBP9.32□□□□□ -0.92
TDP1-214ENST00000556063 GPC2Q8N158 579 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.32□□□□□ -0.92
TDP1-214ENST00000556063 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
TDP1-214ENST00000556063 GJA3Q9Y6H8 435 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 MYH13Q9UKX3 1938 aa9.32□□□□□ -0.92
TDP1-214ENST00000556063 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
TDP1-214ENST00000556063 TTC41PQ6P2S7 1318 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 GLTPD2A6NH11 291 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 YDJCA8MPS7 323 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 PSMD14O00487 310 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 IGSF3O75054 1194 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 GLRX3O76003 335 aaKnown RBP9.31□□□□□ -0.92
TDP1-214ENST00000556063 VIL1P09327 827 aaKnown RBP9.31□□□□□ -0.92
TDP1-214ENST00000556063 ATP5JP18859 108 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 MX1P20591 662 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 LMOD1P29536 600 aaPredicted RBP9.31□□□□□ -0.92
TDP1-214ENST00000556063 RASGRF1Q13972 1273 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 MFSD14BQ5SR56 506 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 SPTY2D1Q68D10 685 aaPredicted RBP9.31□□□□□ -0.92
TDP1-214ENST00000556063 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
TDP1-214ENST00000556063 OGFOD1Q8N543 542 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 SPATA5Q8NB90 893 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 AGBL3Q8NEM8 1001 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 TLR7Q9NYK1 1049 aaKnown RBP9.31□□□□□ -0.92
TDP1-214ENST00000556063 HDAC9Q9UKV0 1011 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
TDP1-214ENST00000556063 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 IQCA1LA6NCM1 817 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 TTF1Q15361 905 aaPredicted RBP9.3□□□□□ -0.92
TDP1-214ENST00000556063 DACT2Q5SW24 774 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 DPF2Q92785 391 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 HMG20BQ9P0W2 317 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 PSME4Q14997 1843 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 MAST3O60307 1309 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 AOX1Q06278 1338 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 ZNF541Q9H0D2 1346 aa9.3□□□□□ -0.92
TDP1-214ENST00000556063 COL4A5P29400 1685 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 H7C1D1 291 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 DDNO94850 711 aaPredicted RBP9.29□□□□□ -0.92
TDP1-214ENST00000556063 LDHBP07195 334 aaKnown RBP9.29□□□□□ -0.92
TDP1-214ENST00000556063 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 MCAMP43121 646 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 PDE1AP54750 535 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 LRRFIP1Q32MZ4 808 aaKnown RBP9.29□□□□□ -0.92
TDP1-214ENST00000556063 SLF2Q8IX21 1173 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 C16orf71Q8IYS4 520 aaPredicted RBP9.29□□□□□ -0.92
TDP1-214ENST00000556063 BOLA2Q9H3K6 86 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 KCNQ5Q9NR82 932 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 SNRKQ9NRH2 765 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 LRP2BPQ9P2M1 347 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 STAP2Q9UGK3 403 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 SALL1Q9NSC2 1324 aa9.29□□□□□ -0.92
TDP1-214ENST00000556063 YY1P25490 414 aa9.28□□□□□ -0.92
TDP1-214ENST00000556063 GMPSP49915 693 aaPredicted RBP9.28□□□□□ -0.92
TDP1-214ENST00000556063 MAP3K12Q12852 859 aa9.28□□□□□ -0.92
TDP1-214ENST00000556063 TMED8Q6PL24 325 aaPredicted RBP9.28□□□□□ -0.92
TDP1-214ENST00000556063 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
TDP1-214ENST00000556063 L3MBTL3Q96JM7 780 aaPredicted RBP9.28□□□□□ -0.92
TDP1-214ENST00000556063 DNAJC2Q99543 621 aaKnown RBP9.28□□□□□ -0.92
TDP1-214ENST00000556063 HAUS7Q99871 368 aa9.28□□□□□ -0.92
TDP1-214ENST00000556063 CNOT7Q9UIV1 285 aaKnown RBP9.28□□□□□ -0.92
TDP1-214ENST00000556063 HACL1Q9UJ83 578 aa9.28□□□□□ -0.92
TDP1-214ENST00000556063 JAG2Q9Y219 1238 aa9.28□□□□□ -0.92
TDP1-214ENST00000556063 AKAP11Q9UKA4 1901 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 LDHCP07864 332 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 VEGFAP15692 232 aaPredicted RBP9.27□□□□□ -0.93
TDP1-214ENST00000556063 ZAP70P43403 619 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 GSTO1P78417 241 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 HDLBPQ00341 1268 aaKnown RBP9.27□□□□□ -0.93
TDP1-214ENST00000556063 SCARF1Q14162 830 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 DZIP1Q86YF9 867 aaKnown RBP9.27□□□□□ -0.93
TDP1-214ENST00000556063 KIAA0825Q8IV33 1275 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 PLEKHM2Q8IWE5 1019 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 OTUD7AQ8TE49 926 aaPredicted RBP9.27□□□□□ -0.93
TDP1-214ENST00000556063 GMLQ99445 158 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.27□□□□□ -0.93
TDP1-214ENST00000556063 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 PAG1Q9NWQ8 432 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 RAI14Q9P0K7 980 aa9.27□□□□□ -0.93
TDP1-214ENST00000556063 TTF2Q9UNY4 1162 aaKnown RBP9.27□□□□□ -0.93
TDP1-214ENST00000556063 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
TDP1-214ENST00000556063 F8W031 263 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms