RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SLC4A10Q6U841 1118 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 MRPL50Q8N5N7 158 aaKnown RBP9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 MXD3Q9BW11 206 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 CFHR5Q9BXR6 569 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 MCOLN1Q9GZU1 580 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 TSKSQ9UJT2 592 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 RIPOR2Q9Y4F9 1068 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 MROH5Q6ZUA9 1318 aa9.82□□□□□ -0.84
PTCSC3-201ENST00000556013 COL1A1P02452 1464 aaPredicted RBP9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 UBE2Q2LH0YL09 131 aa9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 PPP1R12BO60237 982 aaPredicted RBP9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 NBPF7P0C2Y1 421 aaPredicted RBP9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 KLRK1P26718 216 aa9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 HIBADHP31937 336 aaKnown RBP9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 SLFN5Q08AF3 891 aa9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 PKN2Q16513 984 aaKnown RBP9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 HELBQ8NG08 1087 aaPredicted RBP9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 KAZALD1Q96I82 304 aa9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 FAM84BQ96KN1 310 aaPredicted RBP9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 DEFB129Q9H1M3 183 aa9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 HDAC5Q9UQL6 1122 aa9.81□□□□□ -0.84
PTCSC3-201ENST00000556013 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 SNAP23O00161 211 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 ALDH1A1P00352 501 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 HDLBPQ00341 1268 aaKnown RBP9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 SREBF2Q12772 1141 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 DGKZQ13574 1117 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 CERS5Q8N5B7 392 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 SUCLG2Q96I99 432 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 ZNF594Q96JF6 807 aaPredicted RBP9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 PRMT6Q96LA8 375 aaPredicted RBP9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 SERPINA10Q9UK55 444 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 PAPPA2Q9BXP8 1791 aa9.8□□□□□ -0.84
PTCSC3-201ENST00000556013 CCDC85CA6NKD9 419 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 ZBTB22O15209 634 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 PLIN1O60240 522 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 PDE8BO95263 885 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 PTPN12Q05209 780 aaKnown RBP9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 TNFAIP1Q13829 316 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 CFAP100Q494V2 611 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 CAVIN4Q5BKX8 364 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 PRAMEF18Q5VWM3 479 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 CTU1Q7Z7A3 348 aaKnown RBP9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 TBC1D22AQ8WUA7 517 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 SSH1Q8WYL5 1049 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 USP44Q9H0E7 712 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 SUGT1Q9Y2Z0 365 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 CASP8AP2Q9UKL3 1982 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 KIF16BQ96L93 1317 aa9.79□□□□□ -0.84
PTCSC3-201ENST00000556013 MANSC4A6NHS7 340 aaPredicted RBP9.78□□□□□ -0.84
PTCSC3-201ENST00000556013 ZBTB48P10074 688 aaPredicted RBP9.78□□□□□ -0.84
PTCSC3-201ENST00000556013 MFSD14BQ5SR56 506 aa9.78□□□□□ -0.84
PTCSC3-201ENST00000556013 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
PTCSC3-201ENST00000556013 MOB2Q70IA6 237 aa9.78□□□□□ -0.84
PTCSC3-201ENST00000556013 BICC1Q9H694 974 aaKnown RBP9.78□□□□□ -0.84
PTCSC3-201ENST00000556013 ANGEL1Q9UNK9 670 aaKnown RBP9.78□□□□□ -0.84
PTCSC3-201ENST00000556013 CCER2I3L3R5 266 aa9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 IREB2P48200 963 aaKnown RBP9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 MLLT1Q03111 559 aaPredicted RBP9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 SPDYE2Q495Y8 402 aa9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 VPS37DQ86XT2 251 aa9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 ANKRD44Q8N8A2 993 aa9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 PUS3Q9BZE2 481 aaKnown RBP9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 AKAP11Q9UKA4 1901 aa9.77□□□□□ -0.85
PTCSC3-201ENST00000556013 GPR25O00155 361 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 USP2O75604 605 aaPredicted RBP9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 IFIT1P09914 478 aaKnown RBP9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 GYG1P46976 350 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 TNNI2P48788 182 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 RBM5P52756 815 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 RASA3Q14644 834 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 METTL24Q5JXM2 366 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 FKBP1CQ5VVH2 108 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 OTUD7BQ6GQQ9 843 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 ANKRD13AQ8IZ07 590 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 VGLL2Q8N8G2 317 aa9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 SCAF8Q9UPN6 1271 aaKnown RBP9.76□□□□□ -0.85
PTCSC3-201ENST00000556013 ZNF646O15015 1829 aaPredicted RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 F8W031 263 aaPredicted RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 EYA2O00167 538 aa9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 FGFR2P21802 821 aa9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 LRRC24Q50LG9 513 aa9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 NBPF12Q5TAG4 269 aaPredicted RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 ZNF296Q8WUU4 475 aaPredicted RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 LPIN2Q92539 896 aa9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 ARHGAP45Q92619 1136 aa9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 API5Q9BZZ5 524 aaKnown RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 ZNF70Q9UC06 446 aaPredicted RBP9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 MAST3O60307 1309 aa9.75□□□□□ -0.85
PTCSC3-201ENST00000556013 CLRN2A0PK11 232 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms