RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 WDR90Q96KV7 1748 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 ZNF541Q9H0D2 1346 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
CHD8-210ENST00000555962 FZD9O00144 591 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 CIAO1O76071 339 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 DOK7Q18PE1 504 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 METTL24Q5JXM2 366 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 JDP2Q8WYK2 163 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 EYA3Q99504 573 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 DBNDD1Q9H9R9 158 aa11.15□□□□□ -0.62
CHD8-210ENST00000555962 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
CHD8-210ENST00000555962 SCN4AP35499 1836 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
CHD8-210ENST00000555962 YDJCA8MPS7 323 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 PDE8BO95263 885 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 KCNJ4P48050 445 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 NIM1KQ8IY84 436 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 ZC3H12CQ9C0D7 883 aaKnown RBP11.14□□□□□ -0.63
CHD8-210ENST00000555962 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
CHD8-210ENST00000555962 KCNQ5Q9NR82 932 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 ZNRF3Q9ULT6 936 aa11.14□□□□□ -0.63
CHD8-210ENST00000555962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
CHD8-210ENST00000555962 ECE2O60344 883 aa11.13□□□□□ -0.63
CHD8-210ENST00000555962 FGFR2P21802 821 aa11.13□□□□□ -0.63
CHD8-210ENST00000555962 IL15P40933 162 aaPredicted RBP11.13□□□□□ -0.63
CHD8-210ENST00000555962 DSG2Q14126 1118 aa11.13□□□□□ -0.63
CHD8-210ENST00000555962 UBE4AQ14139 1066 aa11.13□□□□□ -0.63
CHD8-210ENST00000555962 C15orf52Q6ZUT6 534 aaKnown RBP11.13□□□□□ -0.63
CHD8-210ENST00000555962 RPAP2Q8IXW5 612 aaPredicted RBP11.13□□□□□ -0.63
CHD8-210ENST00000555962 ZNF784Q8NCA9 323 aaPredicted RBP11.13□□□□□ -0.63
CHD8-210ENST00000555962 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
CHD8-210ENST00000555962 GLTPD2A6NH11 291 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 SURF6O75683 361 aaKnown RBP11.12□□□□□ -0.63
CHD8-210ENST00000555962 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
CHD8-210ENST00000555962 SASH1O94885 1247 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 IRX6P78412 446 aaPredicted RBP11.12□□□□□ -0.63
CHD8-210ENST00000555962 CXCL9Q07325 125 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 TFCP2Q12800 502 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 TMC2Q8TDI7 906 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 NOP58Q9Y2X3 529 aaKnown RBP11.12□□□□□ -0.63
CHD8-210ENST00000555962 PCDHB15Q9Y5E8 787 aa11.12□□□□□ -0.63
CHD8-210ENST00000555962 MYO5AQ9Y4I1 1855 aaKnown RBP11.11□□□□□ -0.63
CHD8-210ENST00000555962 POLR2AP24928 1970 aaKnown RBP11.11□□□□□ -0.63
CHD8-210ENST00000555962 RAD17O75943 681 aa11.11□□□□□ -0.63
CHD8-210ENST00000555962 GYG1P46976 350 aa11.11□□□□□ -0.63
CHD8-210ENST00000555962 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
CHD8-210ENST00000555962 G3BP1Q13283 466 aaKnown RBP eCLIP11.11□□□□□ -0.633e-6■■■■□ 19.7
CHD8-210ENST00000555962 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
CHD8-210ENST00000555962 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
CHD8-210ENST00000555962 FAM84BQ96KN1 310 aaPredicted RBP11.11□□□□□ -0.63
CHD8-210ENST00000555962 NMRK2Q9NPI5 230 aa11.11□□□□□ -0.63
CHD8-210ENST00000555962 CEP126Q9P2H0 1117 aa11.11□□□□□ -0.63
CHD8-210ENST00000555962 EXOC6BQ9Y2D4 811 aa11.11□□□□□ -0.63
CHD8-210ENST00000555962 AKAP11Q9UKA4 1901 aa11.11□□□□□ -0.63
CHD8-210ENST00000555962 POTECB2RU33 542 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 PSMD14O00487 310 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 ATP2B3Q16720 1220 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 LPIN2Q92539 896 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 COA1Q9GZY4 146 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
CHD8-210ENST00000555962 CD209Q9NNX6 404 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 GJA3Q9Y6H8 435 aa11.1□□□□□ -0.63
CHD8-210ENST00000555962 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 ZNF609O15014 1411 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 G3V3G9 751 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 HMMRO75330 724 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 ADORA1P30542 326 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 BCAMP50895 628 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 OS9Q13438 667 aaPredicted RBP11.09□□□□□ -0.63
CHD8-210ENST00000555962 ZNF804AQ7Z570 1209 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 FBXO33Q7Z6M2 555 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 GPC2Q8N158 579 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 RRAGCQ9HB90 399 aa11.09□□□□□ -0.63
CHD8-210ENST00000555962 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
CHD8-210ENST00000555962 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
CHD8-210ENST00000555962 A0A1B0GUL7 405 aa11.08□□□□□ -0.64
CHD8-210ENST00000555962 IFIT1P09914 478 aaKnown RBP11.08□□□□□ -0.64
CHD8-210ENST00000555962 SLC5A1P13866 664 aa11.08□□□□□ -0.64
CHD8-210ENST00000555962 IL1R1P14778 569 aa11.08□□□□□ -0.64
CHD8-210ENST00000555962 HIBADHP31937 336 aaKnown RBP11.08□□□□□ -0.64
CHD8-210ENST00000555962 TIMM10P62072 90 aa11.08□□□□□ -0.64
CHD8-210ENST00000555962 FOXK1P85037 733 aa11.08□□□□□ -0.64
CHD8-210ENST00000555962 TDRD7Q8NHU6 1098 aaKnown RBP11.08□□□□□ -0.64
CHD8-210ENST00000555962 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
CHD8-210ENST00000555962 MXD3Q9BW11 206 aa11.08□□□□□ -0.64
CHD8-210ENST00000555962 COL1A1P02452 1464 aaPredicted RBP11.07□□□□□ -0.64
CHD8-210ENST00000555962 SHTN1A0MZ66 631 aa11.07□□□□□ -0.64
CHD8-210ENST00000555962 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
CHD8-210ENST00000555962 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
CHD8-210ENST00000555962 VIL1P09327 827 aaKnown RBP11.07□□□□□ -0.64
CHD8-210ENST00000555962 GMPSP49915 693 aaPredicted RBP11.07□□□□□ -0.64
CHD8-210ENST00000555962 SCNN1DP51172 638 aa11.07□□□□□ -0.64
CHD8-210ENST00000555962 TNIP1Q15025 636 aa11.07□□□□□ -0.64
CHD8-210ENST00000555962 TNNI3KQ59H18 835 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms