RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 TFE3P19532 575 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 LMNB1P20700 586 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 ETFBP38117 255 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 SIK1P57059 783 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 PCSK7Q16549 785 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 DBN1Q16643 649 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 PCNX4Q63HM2 1172 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 EGFLAMQ63HQ2 1017 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 FAM196AQ6ZSG2 479 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 ANKS3Q6ZW76 656 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 RAB44Q7Z6P3 723 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 CCDC84Q86UT8 332 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 SLITRK4Q8IW52 837 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 TRIM42Q8IWZ5 723 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 ANKRD13AQ8IZ07 590 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 NLGN1Q8N2Q7 840 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 ASAP3Q8TDY4 903 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 HHIPQ96QV1 700 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 PBX4Q9BYU1 374 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 TRIM55Q9BYV6 548 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 RBSNQ9H1K0 784 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 TMEM39AQ9NV64 488 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 GPN3Q9UHW5 284 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 PHF24Q9UPV7 400 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 SAMM50Q9Y512 469 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 MRVI1Q9Y6F6 885 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 U2SURPO15042 1029 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 KLF4O43474 513 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 PAGE1O75459 146 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 GHRHP01286 108 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 FGFR3P22607 806 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 CRKP46108 304 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 PPP2R3AQ06190 1150 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 FAAP100Q0VG06 881 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 RAB33AQ14088 237 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNF662Q6ZS27 426 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 JAZF1Q86VZ6 243 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 CCDC155Q8N6L0 562 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNF837Q96EG3 531 aaPredicted RBP4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 SRRTQ9BXP5 876 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 LRRC3Q9BY71 257 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 RASSF4Q9H2L5 321 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 ATP13A2Q9NQ11 1180 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 PRKAG3Q9UGI9 489 aa4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 R3HCC1Q9Y3T6 440 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-212ENST00000555858 SOBPA7XYQ1 873 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 ZBTB42B2RXF5 422 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 J3QW42 95 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 SMNDC1O75940 238 aaKnown RBP eCLIP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 CLSTN1O94985 981 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 ATP11AP98196 1134 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 MLLT1Q03111 559 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 TNNI3KQ59H18 835 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 DIEXFQ68CQ4 756 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 LRP10Q7Z4F1 713 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 GATAD2BQ8WXI9 593 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 BSNDQ8WZ55 320 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 GTPBP3Q969Y2 492 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 ANAPC16Q96DE5 110 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 SRPK1Q96SB4 655 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 POP1Q99575 1024 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 MUC3BQ9H195 1237 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 MIR1-1HGQ9H1L0 117 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 CLEC4MQ9H2X3 399 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 PRR12Q9ULL5 1215 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 CYP8B1Q9UNU6 501 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 MRPL42Q9Y6G3 142 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 SBNO2Q9Y2G9 1366 aa4.39□□□□□ -1.71
MTHFD1-212ENST00000555858 NRG2O14511 850 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 F13A1P00488 732 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 EIF2AK2P19525 551 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 NME2P22392 152 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 ITGA6P23229 1130 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 HSD3B2P26439 372 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 PCDH1Q08174 1060 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 MPP2Q14168 576 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 LRRC14Q15048 493 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 CWF19L2Q2TBE0 894 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 SEZ6Q53EL9 994 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 CEP135Q66GS9 1140 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 BNC2Q6ZN30 1099 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 HFE2Q6ZVN8 426 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 HNRNPLLQ8WVV9 542 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 SHDQ96IW2 340 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 TRERF1Q96PN7 1200 aa4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 UBE2OQ9C0C9 1292 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 DNAJB12Q9NXW2 375 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.38□□□□□ -1.71
MTHFD1-212ENST00000555858 FAM221AA4D161 298 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 SMAD7O15105 426 aaKnown RBP4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 TLR3O15455 904 aaKnown RBP4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 SIN3BO75182 1162 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 B3GALT4O96024 378 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 PTPRAP18433 802 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 BMP6P22004 513 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 MCM4P33991 863 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNF165P49910 485 aa4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 ZNF157P51786 506 aaPredicted RBP4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 EIF6P56537 245 aaKnown RBP4.37□□□□□ -1.71
MTHFD1-212ENST00000555858 RASA3Q14644 834 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms