RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 PPP2R3BQ9Y5P8 575 aa24.73■■□□□ 1.55
FOXN3-211ENST00000555855 TNRC18O15417 2968 aaPredicted RBP24.73■■□□□ 1.55
FOXN3-211ENST00000555855 MAP3K11Q16584 847 aa24.71■■□□□ 1.55
FOXN3-211ENST00000555855 R3HDMLQ9H3Y0 253 aa24.71■■□□□ 1.55
FOXN3-211ENST00000555855 COL1A1P02452 1464 aaPredicted RBP24.7■■□□□ 1.55
FOXN3-211ENST00000555855 UNCXA6NJT0 531 aa24.7■■□□□ 1.54
FOXN3-211ENST00000555855 F8W031 263 aaPredicted RBP24.7■■□□□ 1.54
FOXN3-211ENST00000555855 SNAP23O00161 211 aa24.7■■□□□ 1.54
FOXN3-211ENST00000555855 NCBP3Q53F19 620 aaKnown RBP24.7■■□□□ 1.54
FOXN3-211ENST00000555855 CERS5Q8N5B7 392 aa24.7■■□□□ 1.54
FOXN3-211ENST00000555855 FZD1Q9UP38 647 aa24.7■■□□□ 1.54
FOXN3-211ENST00000555855 ZNF646O15015 1829 aaPredicted RBP24.7■■□□□ 1.54
FOXN3-211ENST00000555855 ZBTB48P10074 688 aaPredicted RBP24.69■■□□□ 1.54
FOXN3-211ENST00000555855 IL1R1P14778 569 aa24.69■■□□□ 1.54
FOXN3-211ENST00000555855 RBM5P52756 815 aaKnown RBP eCLIP24.69■■□□□ 1.54
FOXN3-211ENST00000555855 FKBP1AP62942 108 aaKnown RBP24.69■■□□□ 1.54
FOXN3-211ENST00000555855 CFAP100Q494V2 611 aa24.69■■□□□ 1.54
FOXN3-211ENST00000555855 IFNL1Q8IU54 200 aa24.69■■□□□ 1.54
FOXN3-211ENST00000555855 CACNA1FO60840 1977 aa24.68■■□□□ 1.54
FOXN3-211ENST00000555855 FOXO4P98177 505 aa24.68■■□□□ 1.54
FOXN3-211ENST00000555855 CCDC57Q2TAC2 916 aa24.68■■□□□ 1.54
FOXN3-211ENST00000555855 TAF7LQ5H9L4 462 aa24.68■■□□□ 1.54
FOXN3-211ENST00000555855 OTUD7BQ6GQQ9 843 aa24.68■■□□□ 1.54
FOXN3-211ENST00000555855 VEZTQ9HBM0 779 aa24.68■■□□□ 1.54
FOXN3-211ENST00000555855 CLRN2A0PK11 232 aa24.67■■□□□ 1.54
FOXN3-211ENST00000555855 PLIN1O60240 522 aa24.67■■□□□ 1.54
FOXN3-211ENST00000555855 VAMP4O75379 141 aa24.67■■□□□ 1.54
FOXN3-211ENST00000555855 IREB2P48200 963 aaKnown RBP24.67■■□□□ 1.54
FOXN3-211ENST00000555855 CCDC184Q52MB2 194 aa24.67■■□□□ 1.54
FOXN3-211ENST00000555855 WNK4Q96J92 1243 aa24.67■■□□□ 1.54
FOXN3-211ENST00000555855 PRMT6Q96LA8 375 aaPredicted RBP24.67■■□□□ 1.54
FOXN3-211ENST00000555855 SPDYE2BA6NHP3 402 aa24.66■■□□□ 1.54
FOXN3-211ENST00000555855 SPDYE6P0CI01 402 aa24.66■■□□□ 1.54
FOXN3-211ENST00000555855 LMBR1LQ6UX01 489 aa24.66■■□□□ 1.54
FOXN3-211ENST00000555855 LDHAL6AQ6ZMR3 332 aa24.66■■□□□ 1.54
FOXN3-211ENST00000555855 CLMNQ96JQ2 1002 aa24.66■■□□□ 1.54
FOXN3-211ENST00000555855 TRIM17Q9Y577 477 aa24.66■■□□□ 1.54
FOXN3-211ENST00000555855 IRS2Q9Y4H2 1338 aa24.65■■□□□ 1.54
FOXN3-211ENST00000555855 CNNM1Q9NRU3 951 aa24.65■■□□□ 1.54
FOXN3-211ENST00000555855 PCDHAC2Q9Y5I4 1007 aa24.65■■□□□ 1.54
FOXN3-211ENST00000555855 FANCIQ9NVI1 1328 aa24.64■■□□□ 1.54
FOXN3-211ENST00000555855 BEND3Q5T5X7 828 aa24.64■■□□□ 1.54
FOXN3-211ENST00000555855 NBPF12Q5TAG4 269 aaPredicted RBP24.64■■□□□ 1.54
FOXN3-211ENST00000555855 INTS3Q68E01 1043 aaKnown RBP24.64■■□□□ 1.54
FOXN3-211ENST00000555855 WDR63Q8IWG1 891 aa24.64■■□□□ 1.54
FOXN3-211ENST00000555855 F6X3S4 739 aa24.63■■□□□ 1.53
FOXN3-211ENST00000555855 USP2O75604 605 aaPredicted RBP24.63■■□□□ 1.53
FOXN3-211ENST00000555855 EXOSC9Q06265 439 aaKnown RBP24.63■■□□□ 1.53
FOXN3-211ENST00000555855 ANKRD13AQ8IZ07 590 aa24.63■■□□□ 1.53
FOXN3-211ENST00000555855 ERO1AQ96HE7 468 aa24.63■■□□□ 1.53
FOXN3-211ENST00000555855 JAG2Q9Y219 1238 aa24.63■■□□□ 1.53
FOXN3-211ENST00000555855 SALL2Q9Y467 1007 aaPredicted RBP24.63■■□□□ 1.53
FOXN3-211ENST00000555855 TNFAIP1Q13829 316 aa24.62■■□□□ 1.53
FOXN3-211ENST00000555855 RASA3Q14644 834 aa24.62■■□□□ 1.53
FOXN3-211ENST00000555855 ZNF594Q96JF6 807 aaPredicted RBP24.62■■□□□ 1.53
FOXN3-211ENST00000555855 C9orf78Q9NZ63 289 aaPredicted RBP24.62■■□□□ 1.53
FOXN3-211ENST00000555855 IGF2BP3O00425 579 aaKnown RBP eCLIP24.61■■□□□ 1.53
FOXN3-211ENST00000555855 OTOP1Q7RTM1 612 aa24.61■■□□□ 1.53
FOXN3-211ENST00000555855 GRM8O00222 908 aa24.6■■□□□ 1.53
FOXN3-211ENST00000555855 FAM205AQ6ZU69 1335 aa24.6■■□□□ 1.53
FOXN3-211ENST00000555855 HIBADHP31937 336 aaKnown RBP24.59■■□□□ 1.53
FOXN3-211ENST00000555855 UBE4AQ14139 1066 aa24.59■■□□□ 1.53
FOXN3-211ENST00000555855 EPHA10Q5JZY3 1008 aa24.59■■□□□ 1.53
FOXN3-211ENST00000555855 ECM29Q5VYK3 1845 aa24.58■■□□□ 1.53
FOXN3-211ENST00000555855 MFSD14BQ5SR56 506 aa24.58■■□□□ 1.53
FOXN3-211ENST00000555855 TDRD7Q8NHU6 1098 aaKnown RBP24.58■■□□□ 1.53
FOXN3-211ENST00000555855 GCC1Q96CN9 775 aa24.58■■□□□ 1.53
FOXN3-211ENST00000555855 MRS2Q9HD23 443 aa24.58■■□□□ 1.53
FOXN3-211ENST00000555855 ZNF70Q9UC06 446 aaPredicted RBP24.58■■□□□ 1.53
FOXN3-211ENST00000555855 SERPINA10Q9UK55 444 aa24.58■■□□□ 1.53
FOXN3-211ENST00000555855 TTF2Q9UNY4 1162 aaKnown RBP24.58■■□□□ 1.53
FOXN3-211ENST00000555855 CRHR2Q13324 411 aa24.57■■□□□ 1.52
FOXN3-211ENST00000555855 EFCC1Q9HA90 598 aa24.57■■□□□ 1.52
FOXN3-211ENST00000555855 PTPN22Q9Y2R2 807 aa24.57■■□□□ 1.52
FOXN3-211ENST00000555855 SSC5DA1L4H1 1573 aa24.57■■□□□ 1.52
FOXN3-211ENST00000555855 TESPA1A2RU30 521 aaPredicted RBP24.56■■□□□ 1.52
FOXN3-211ENST00000555855 ALDH1L1O75891 902 aa24.56■■□□□ 1.52
FOXN3-211ENST00000555855 TNNI2P48788 182 aa24.56■■□□□ 1.52
FOXN3-211ENST00000555855 SP3Q02447 781 aa24.56■■□□□ 1.52
FOXN3-211ENST00000555855 SPDYE2Q495Y8 402 aa24.56■■□□□ 1.52
FOXN3-211ENST00000555855 CD99L2Q8TCZ2 262 aa24.56■■□□□ 1.52
FOXN3-211ENST00000555855 TDRD3Q9H7E2 651 aaKnown RBP24.56■■□□□ 1.52
FOXN3-211ENST00000555855 ELP3Q9H9T3 547 aa24.56■■□□□ 1.52
FOXN3-211ENST00000555855 GJA5P36382 358 aa24.55■■□□□ 1.52
FOXN3-211ENST00000555855 GYG1P46976 350 aa24.55■■□□□ 1.52
FOXN3-211ENST00000555855 ARHGEF6Q15052 776 aa24.55■■□□□ 1.52
FOXN3-211ENST00000555855 SLC4A10Q6U841 1118 aa24.55■■□□□ 1.52
FOXN3-211ENST00000555855 OPTNQ96CV9 577 aa24.55■■□□□ 1.52
FOXN3-211ENST00000555855 FAM84BQ96KN1 310 aaPredicted RBP24.55■■□□□ 1.52
FOXN3-211ENST00000555855 AOX1Q06278 1338 aa24.55■■□□□ 1.52
FOXN3-211ENST00000555855 DZIP1LQ8IYY4 767 aaKnown RBP24.54■■□□□ 1.52
FOXN3-211ENST00000555855 SRCIN1Q9C0H9 1055 aa24.54■■□□□ 1.52
FOXN3-211ENST00000555855 VPS37DQ86XT2 251 aa24.53■■□□□ 1.52
FOXN3-211ENST00000555855 PTPN18Q99952 460 aa24.53■■□□□ 1.52
FOXN3-211ENST00000555855 TCP10L2B9ZVM9 353 aa24.52■■□□□ 1.52
FOXN3-211ENST00000555855 MAP3K9P80192 1104 aa24.52■■□□□ 1.52
FOXN3-211ENST00000555855 POTEFA5A3E0 1075 aa24.51■■□□□ 1.51
FOXN3-211ENST00000555855 FRAT2O75474 233 aaPredicted RBP24.51■■□□□ 1.51
FOXN3-211ENST00000555855 CRKP46108 304 aa24.51■■□□□ 1.51
FOXN3-211ENST00000555855 PUS3Q9BZE2 481 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms