RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 STK32AQ8WU08 396 aa8.12□□□□□ -1.11
ATXN3-233ENST00000555816 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
ATXN3-233ENST00000555816 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
ATXN3-233ENST00000555816 KIF4AO95239 1232 aa8.11□□□□□ -1.11
ATXN3-233ENST00000555816 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-233ENST00000555816 ABI2Q9NYB9 513 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-233ENST00000555816 TRIM33Q9UPN9 1127 aa8.11□□□□□ -1.11
ATXN3-233ENST00000555816 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
ATXN3-233ENST00000555816 ATP10AO60312 1499 aa8.11□□□□□ -1.11
ATXN3-233ENST00000555816 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
ATXN3-233ENST00000555816 CDC27P30260 824 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 SCNN1AP37088 669 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 TMEM164Q5U3C3 297 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 FAM117BQ6P1L5 589 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.1□□□□□ -1.11
ATXN3-233ENST00000555816 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 PBXIP1Q96AQ6 731 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 CEP41Q9BYV8 373 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 RIMS1Q86UR5 1692 aaKnown RBP8.1□□□□□ -1.11
ATXN3-233ENST00000555816 PTPRTO14522 1441 aa8.1□□□□□ -1.11
ATXN3-233ENST00000555816 ZFYVE16Q7Z3T8 1539 aa8.09□□□□□ -1.11
ATXN3-233ENST00000555816 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-233ENST00000555816 FAM177BA6PVY3 158 aa8.09□□□□□ -1.11
ATXN3-233ENST00000555816 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-233ENST00000555816 NAA30Q147X3 362 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-233ENST00000555816 XKR5Q6UX68 686 aa8.09□□□□□ -1.11
ATXN3-233ENST00000555816 SERPINA10Q9UK55 444 aa8.09□□□□□ -1.11
ATXN3-233ENST00000555816 PLCH2O75038 1416 aa8.09□□□□□ -1.11
ATXN3-233ENST00000555816 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
ATXN3-233ENST00000555816 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 FSTP19883 344 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 UVSSAQ2YD98 709 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 FAM26DQ5JW98 314 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 GPR152Q8TDT2 470 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 WNT8BQ93098 351 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 MKNK1Q9BUB5 465 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 PBX4Q9BYU1 374 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 RAXQ9Y2V3 346 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 CTTNBP2Q8WZ74 1663 aa8.08□□□□□ -1.12
ATXN3-233ENST00000555816 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 ALX3O95076 343 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 PCSK2P16519 638 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 CEP120Q8N960 986 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 PMEPA1Q969W9 287 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 ADAM19Q9H013 955 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 ZMYND15Q9H091 742 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 CDK11AQ9UQ88 783 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-233ENST00000555816 ARHGEF12Q9NZN5 1544 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
ATXN3-233ENST00000555816 LINC01387J3KSC0 135 aa8.06□□□□□ -1.12
ATXN3-233ENST00000555816 DHX15O43143 795 aaKnown RBP8.06□□□□□ -1.12
ATXN3-233ENST00000555816 GLB1P16278 677 aa8.06□□□□□ -1.12
ATXN3-233ENST00000555816 PTPRAP18433 802 aa8.06□□□□□ -1.12
ATXN3-233ENST00000555816 COL13A1Q5TAT6 717 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-233ENST00000555816 CAPN12Q6ZSI9 719 aa8.06□□□□□ -1.12
ATXN3-233ENST00000555816 CCDC97Q96F63 343 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-233ENST00000555816 ELP3Q9H9T3 547 aa8.06□□□□□ -1.12
ATXN3-233ENST00000555816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-233ENST00000555816 ZBTB39O15060 712 aa8.05□□□□□ -1.12
ATXN3-233ENST00000555816 NCAPG2Q86XI2 1143 aa8.05□□□□□ -1.12
ATXN3-233ENST00000555816 GALNT11Q8NCW6 608 aa8.05□□□□□ -1.12
ATXN3-233ENST00000555816 STOML1Q9UBI4 398 aa8.05□□□□□ -1.12
ATXN3-233ENST00000555816 TTC37Q6PGP7 1564 aa8.05□□□□□ -1.12
ATXN3-233ENST00000555816 TRAPPC8Q9Y2L5 1435 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 HECW1Q76N89 1606 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 FSCN2O14926 492 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 ATP2B4P23634 1241 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 CABP4P57796 275 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 ATP11AP98196 1134 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 TTC16Q8NEE8 873 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 RASSF4Q9H2L5 321 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 OSGEPQ9NPF4 335 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
ATXN3-233ENST00000555816 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 CFAP74Q9C0B2 1584 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 TM4SF5O14894 197 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 IGLV1-40P01703 118 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 PIP4K2BP78356 416 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
ATXN3-233ENST00000555816 UBL7Q96S82 380 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-233ENST00000555816 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 LACRTQ9GZZ8 138 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 PCMTD2Q9NV79 361 aa8.03□□□□□ -1.12
ATXN3-233ENST00000555816 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
ATXN3-233ENST00000555816 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-233ENST00000555816 DUOXA2Q1HG44 320 aa8.02□□□□□ -1.13
ATXN3-233ENST00000555816 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
ATXN3-233ENST00000555816 POP1Q99575 1024 aaKnown RBP8.02□□□□□ -1.13
ATXN3-233ENST00000555816 SEC31BQ9NQW1 1179 aa8.02□□□□□ -1.13
ATXN3-233ENST00000555816 SALL4Q9UJQ4 1053 aa8.02□□□□□ -1.13
ATXN3-233ENST00000555816 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
ATXN3-233ENST00000555816 COBLO75128 1261 aa8.01□□□□□ -1.13
ATXN3-233ENST00000555816 CD97P48960 835 aa8.01□□□□□ -1.13
ATXN3-233ENST00000555816 NOM1Q5C9Z4 860 aaKnown RBP8.01□□□□□ -1.13
ATXN3-233ENST00000555816 INTS5Q6P9B9 1019 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms