RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TTC39BQ5VTQ0 682 aaPredicted RBP8.17□□□□□ -1.1
SNX6-204ENST00000555541 SUGCTQ9HAC7 445 aa8.17□□□□□ -1.1
SNX6-204ENST00000555541 ATG3Q9NT62 314 aa8.17□□□□□ -1.1
SNX6-204ENST00000555541 FDX2Q6P4F2 183 aa8.16□□□□□ -1.1
SNX6-204ENST00000555541 FBXL6Q8N531 539 aa8.16□□□□□ -1.1
SNX6-204ENST00000555541 SMG8Q8ND04 991 aaKnown RBP8.16□□□□□ -1.1
SNX6-204ENST00000555541 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
SNX6-204ENST00000555541 GATA6Q92908 595 aa8.16□□□□□ -1.1
SNX6-204ENST00000555541 PAK6Q9NQU5 681 aaPredicted RBP8.16□□□□□ -1.1
SNX6-204ENST00000555541 STIM2Q9P246 746 aa8.16□□□□□ -1.1
SNX6-204ENST00000555541 SALL4Q9UJQ4 1053 aa8.16□□□□□ -1.1
SNX6-204ENST00000555541 SOX13Q9UN79 622 aa8.16□□□□□ -1.1
SNX6-204ENST00000555541 DLGAP3O95886 979 aa8.15□□□□□ -1.1
SNX6-204ENST00000555541 ACPPP15309 386 aa8.15□□□□□ -1.1
SNX6-204ENST00000555541 ADMP35318 185 aa8.15□□□□□ -1.1
SNX6-204ENST00000555541 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
SNX6-204ENST00000555541 PAPLNO95428 1278 aa8.14□□□□□ -1.11
SNX6-204ENST00000555541 WFDC3Q8IUB2 231 aa8.14□□□□□ -1.11
SNX6-204ENST00000555541 OSBPL1AQ9BXW6 950 aa8.14□□□□□ -1.11
SNX6-204ENST00000555541 FAM13BQ9NYF5 915 aa8.14□□□□□ -1.11
SNX6-204ENST00000555541 TMEM63CQ9P1W3 806 aa8.14□□□□□ -1.11
SNX6-204ENST00000555541 CNTN3Q9P232 1028 aa8.14□□□□□ -1.11
SNX6-204ENST00000555541 SPOCD1Q6ZMY3 1216 aa8.13□□□□□ -1.11
SNX6-204ENST00000555541 NCAPG2Q86XI2 1143 aa8.13□□□□□ -1.11
SNX6-204ENST00000555541 HHIPQ96QV1 700 aa8.13□□□□□ -1.11
SNX6-204ENST00000555541 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
SNX6-204ENST00000555541 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
SNX6-204ENST00000555541 SEPT3Q9UH03 358 aa8.13□□□□□ -1.11
SNX6-204ENST00000555541 FNDC3AQ9Y2H6 1198 aaKnown RBP8.13□□□□□ -1.11
SNX6-204ENST00000555541 GAS2O43903 313 aaKnown RBP8.12□□□□□ -1.11
SNX6-204ENST00000555541 CDPF1Q6NVV7 123 aa8.12□□□□□ -1.11
SNX6-204ENST00000555541 TP53INP2Q8IXH6 220 aa8.12□□□□□ -1.11
SNX6-204ENST00000555541 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
SNX6-204ENST00000555541 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
SNX6-204ENST00000555541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
SNX6-204ENST00000555541 PDE12Q6L8Q7 609 aaKnown RBP8.11□□□□□ -1.11
SNX6-204ENST00000555541 ZAR1Q86SH2 424 aa8.11□□□□□ -1.11
SNX6-204ENST00000555541 METTL22Q9BUU2 404 aaPredicted RBP8.11□□□□□ -1.11
SNX6-204ENST00000555541 KRTAP4-5Q9BYR2 181 aa8.11□□□□□ -1.11
SNX6-204ENST00000555541 ELP3Q9H9T3 547 aa8.11□□□□□ -1.11
SNX6-204ENST00000555541 KANSL3Q9P2N6 904 aa8.11□□□□□ -1.11
SNX6-204ENST00000555541 PRKAG2Q9UGJ0 569 aa8.11□□□□□ -1.11
SNX6-204ENST00000555541 CARMIL2Q6F5E8 1435 aa8.11□□□□□ -1.11
SNX6-204ENST00000555541 LOC100289279A0A1B0GTE1 492 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 FAM95CA0A1B0GW59 222 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
SNX6-204ENST00000555541 CABP4P57796 275 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 C19orf57Q0VDD7 668 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 FBLN7Q53RD9 439 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 XKR5Q6UX68 686 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 VN1R5Q7Z5H4 357 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 ATCAYQ86WG3 371 aa8.1□□□□□ -1.11
SNX6-204ENST00000555541 TRPA1O75762 1119 aa8.09□□□□□ -1.11
SNX6-204ENST00000555541 ABTB2Q8N961 1025 aa8.09□□□□□ -1.11
SNX6-204ENST00000555541 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
SNX6-204ENST00000555541 FBLIM1Q8WUP2 373 aa8.09□□□□□ -1.11
SNX6-204ENST00000555541 SLC7A3Q8WY07 619 aa8.09□□□□□ -1.11
SNX6-204ENST00000555541 PBXIP1Q96AQ6 731 aa8.09□□□□□ -1.11
SNX6-204ENST00000555541 NUDT16Q96DE0 195 aaKnown RBP8.09□□□□□ -1.11
SNX6-204ENST00000555541 PDE2AO00408 941 aaPredicted RBP8.08□□□□□ -1.12
SNX6-204ENST00000555541 CYP26A1O43174 497 aa8.08□□□□□ -1.12
SNX6-204ENST00000555541 DRD2P14416 443 aa8.08□□□□□ -1.12
SNX6-204ENST00000555541 ZNF648Q5T619 568 aaPredicted RBP8.08□□□□□ -1.12
SNX6-204ENST00000555541 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
SNX6-204ENST00000555541 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
SNX6-204ENST00000555541 GGNBP2Q9H3C7 697 aa8.08□□□□□ -1.12
SNX6-204ENST00000555541 FAM170BA6NMN3 283 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 ATP2B4P23634 1241 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 RXRBP28702 533 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 NFKBIBQ15653 356 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 PAOXQ6QHF9 649 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 C1orf127Q8N9H9 656 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 TMEM102Q8N9M5 508 aaPredicted RBP8.07□□□□□ -1.12
SNX6-204ENST00000555541 AGBL5Q8NDL9 886 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 NRSN2Q9GZP1 204 aa8.07□□□□□ -1.12
SNX6-204ENST00000555541 ZC3H7BQ9UGR2 993 aaKnown RBP8.07□□□□□ -1.12
SNX6-204ENST00000555541 FLCNQ8NFG4 579 aa8.06□□□□□ -1.12
SNX6-204ENST00000555541 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
SNX6-204ENST00000555541 CHRDQ9H2X0 955 aa8.06□□□□□ -1.12
SNX6-204ENST00000555541 DBX1A6NMT0 343 aa8.05□□□□□ -1.12
SNX6-204ENST00000555541 FAM177BA6PVY3 158 aa8.05□□□□□ -1.12
SNX6-204ENST00000555541 SOX17Q9H6I2 414 aaPredicted RBP8.05□□□□□ -1.12
SNX6-204ENST00000555541 CYP4F12Q9HCS2 524 aa8.05□□□□□ -1.12
SNX6-204ENST00000555541 A6NHS1 94 aa8.04□□□□□ -1.12
SNX6-204ENST00000555541 ZNF124Q15973 351 aa8.04□□□□□ -1.12
SNX6-204ENST00000555541 HELQQ8TDG4 1101 aa8.04□□□□□ -1.12
SNX6-204ENST00000555541 TBC1D32Q96NH3 1257 aa8.04□□□□□ -1.12
SNX6-204ENST00000555541 PDGFAP04085 211 aa8.03□□□□□ -1.12
SNX6-204ENST00000555541 ARL4DP49703 201 aa8.03□□□□□ -1.12
SNX6-204ENST00000555541 SOX4Q06945 474 aaPredicted RBP8.03□□□□□ -1.12
SNX6-204ENST00000555541 EXOSC6Q5RKV6 272 aaKnown RBP8.03□□□□□ -1.12
SNX6-204ENST00000555541 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
SNX6-204ENST00000555541 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
SNX6-204ENST00000555541 BSNDQ8WZ55 320 aa8.03□□□□□ -1.12
SNX6-204ENST00000555541 EDEM1Q92611 657 aa8.03□□□□□ -1.12
SNX6-204ENST00000555541 SPRED2Q7Z698 418 aa8.02□□□□□ -1.13
SNX6-204ENST00000555541 CES1P23141 567 aa8.01□□□□□ -1.13
SNX6-204ENST00000555541 IKBKEQ14164 716 aa8.01□□□□□ -1.13
SNX6-204ENST00000555541 SEZ6L2Q6UXD5 910 aa8.01□□□□□ -1.13
SNX6-204ENST00000555541 USP26Q9BXU7 913 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms