RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 CFAP100Q494V2 611 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 OTUD7BQ6GQQ9 843 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 PI4KAP1Q8N8J0 262 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 HELBQ8NG08 1087 aaPredicted RBP10.8□□□□□ -0.68
NEK9-206ENST00000555537 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 ZNF333Q96JL9 665 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 ELP3Q9H9T3 547 aa10.8□□□□□ -0.68
NEK9-206ENST00000555537 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
NEK9-206ENST00000555537 DDX58O95786 925 aaKnown RBP10.79□□□□□ -0.68
NEK9-206ENST00000555537 ITGA6P23229 1130 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 KCNJ4P48050 445 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 IREB2P48200 963 aaKnown RBP10.79□□□□□ -0.68
NEK9-206ENST00000555537 MMP14P50281 582 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 RASA3Q14644 834 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 SLC9C1Q4G0N8 1177 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 KSR2Q6VAB6 950 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 UBE3BQ7Z3V4 1068 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 TSPYL6Q8N831 410 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 OPTNQ96CV9 577 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 OTUD5Q96G74 571 aa10.79□□□□□ -0.68
NEK9-206ENST00000555537 H7C1W4 665 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 RBM5P52756 815 aaKnown RBP eCLIP10.78□□□□□ -0.68
NEK9-206ENST00000555537 CHRNDQ07001 517 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 WDR43Q15061 677 aaKnown RBP eCLIP10.78□□□□□ -0.68
NEK9-206ENST00000555537 RALBP1Q15311 655 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 NBPF11Q86T75 865 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 CDAN1Q8IWY9 1227 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 ANKRD13AQ8IZ07 590 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 MTMR14Q8NCE2 650 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 SH3TC2Q8TF17 1288 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 MS4A4AQ96JQ5 239 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 MPHOSPH8Q99549 860 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 ARHGAP39Q9C0H5 1083 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 ANKRD2Q9GZV1 360 aa10.78□□□□□ -0.68
NEK9-206ENST00000555537 RBBP6Q7Z6E9 1792 aaKnown RBP10.77□□□□□ -0.68
NEK9-206ENST00000555537 SPDYE2BA6NHP3 402 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 NEURL1BA8MQ27 555 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 MYO1BO43795 1136 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 SPDYE6P0CI01 402 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 CCDC30Q5VVM6 783 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 G2E3Q7L622 706 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 BRI3BPQ8WY22 251 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 PPP2R3BQ9Y5P8 575 aa10.77□□□□□ -0.69
NEK9-206ENST00000555537 COL1A1P02452 1464 aaPredicted RBP10.76□□□□□ -0.69
NEK9-206ENST00000555537 CCL15-CCL14A0A0B4J2E2 113 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 UNCXA6NJT0 531 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 APAF1O14727 1248 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 GNAI1P63096 354 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 TAF1CQ15572 869 aaPredicted RBP10.76□□□□□ -0.69
NEK9-206ENST00000555537 CCL15Q16663 113 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.76□□□□□ -0.69
NEK9-206ENST00000555537 FAM43AQ8N2R8 423 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 ZFYVE28Q9HCC9 887 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
NEK9-206ENST00000555537 SZT2Q5T011 3432 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 IRS2Q9Y4H2 1338 aa10.76□□□□□ -0.69
NEK9-206ENST00000555537 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
NEK9-206ENST00000555537 DLL1O00548 723 aa10.75□□□□□ -0.69
NEK9-206ENST00000555537 PLIN1O60240 522 aa10.75□□□□□ -0.69
NEK9-206ENST00000555537 CSF1RP07333 972 aa10.75□□□□□ -0.69
NEK9-206ENST00000555537 DPF3Q92784 378 aa10.75□□□□□ -0.69
NEK9-206ENST00000555537 TDRD3Q9H7E2 651 aaKnown RBP10.75□□□□□ -0.69
NEK9-206ENST00000555537 ZNF70Q9UC06 446 aaPredicted RBP10.75□□□□□ -0.69
NEK9-206ENST00000555537 TCP10L2B9ZVM9 353 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 IL1R1P14778 569 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 CASP7P55210 303 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 VGLL4Q14135 290 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 GCKRQ14397 625 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 MTFR1Q15390 333 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 TEPSINQ96N21 525 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 TMEM39BQ9GZU3 492 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 ZSWIM8A7E2V4 1837 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 MYH3P11055 1940 aa10.74□□□□□ -0.69
NEK9-206ENST00000555537 ANKRD18BA2A2Z9 1011 aa10.73□□□□□ -0.69
NEK9-206ENST00000555537 GTF2A2P52657 109 aa10.73□□□□□ -0.69
NEK9-206ENST00000555537 MAP3K9P80192 1104 aa10.73□□□□□ -0.69
NEK9-206ENST00000555537 ARHGEF6Q15052 776 aa10.73□□□□□ -0.69
NEK9-206ENST00000555537 SLC17A8Q8NDX2 589 aa10.73□□□□□ -0.69
NEK9-206ENST00000555537 TSR2Q969E8 191 aaKnown RBP10.73□□□□□ -0.69
NEK9-206ENST00000555537 ZNF594Q96JF6 807 aaPredicted RBP10.73□□□□□ -0.69
NEK9-206ENST00000555537 PLA2G12BQ9BX93 195 aa10.73□□□□□ -0.69
NEK9-206ENST00000555537 MYBBP1AQ9BQG0 1328 aaKnown RBP10.73□□□□□ -0.69
NEK9-206ENST00000555537 LAMB1P07942 1786 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 BTBD19C9JJ37 291 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 CTGFP29279 349 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 FKBP1AP62942 108 aaKnown RBP10.72□□□□□ -0.69
NEK9-206ENST00000555537 LACTBP83111 547 aaPredicted RBP10.72□□□□□ -0.69
NEK9-206ENST00000555537 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
NEK9-206ENST00000555537 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 C15orf52Q6ZUT6 534 aaKnown RBP10.72□□□□□ -0.69
NEK9-206ENST00000555537 ZNF804AQ7Z570 1209 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 SHISA4Q96DD7 197 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 TTF2Q9UNY4 1162 aaKnown RBP10.72□□□□□ -0.69
NEK9-206ENST00000555537 CHMP3Q9Y3E7 222 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
NEK9-206ENST00000555537 TLR2O60603 784 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms