RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 TTLL6Q8N841 843 aa13.41□□□□□ -0.26
XRCC3-213ENST00000555451 FAM84BQ96KN1 310 aaPredicted RBP13.41□□□□□ -0.26
XRCC3-213ENST00000555451 LSG1Q9H089 658 aaKnown RBP13.41□□□□□ -0.26
XRCC3-213ENST00000555451 DENND2AQ9ULE3 1009 aa13.41□□□□□ -0.26
XRCC3-213ENST00000555451 ATP6V0A2Q9Y487 856 aa13.41□□□□□ -0.26
XRCC3-213ENST00000555451 CCDC171Q6TFL3 1326 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
XRCC3-213ENST00000555451 GYG1P46976 350 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 ANAPC15P60006 121 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 GPSM2P81274 684 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 MCMDC2Q4G0Z9 681 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 PI16Q6UXB8 463 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 TMX4Q9H1E5 349 aaPredicted RBP13.4□□□□□ -0.26
XRCC3-213ENST00000555451 GGA1Q9UJY5 639 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
XRCC3-213ENST00000555451 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
XRCC3-213ENST00000555451 HSPA4P34932 840 aa13.39□□□□□ -0.27
XRCC3-213ENST00000555451 BECN1Q14457 450 aa13.39□□□□□ -0.27
XRCC3-213ENST00000555451 APPBP2Q92624 585 aa13.39□□□□□ -0.27
XRCC3-213ENST00000555451 CNKSR1Q969H4 720 aa13.39□□□□□ -0.27
XRCC3-213ENST00000555451 ZNF622Q969S3 477 aaKnown RBP eCLIP13.39□□□□□ -0.27
XRCC3-213ENST00000555451 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
XRCC3-213ENST00000555451 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
XRCC3-213ENST00000555451 IGSF3O75054 1194 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 UFL1O94874 794 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 KLRK1P26718 216 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 ADD2P35612 726 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 RABEP1Q15276 862 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 UBE3CQ15386 1083 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 ZNF804AQ7Z570 1209 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 KIF2CQ99661 725 aa13.38□□□□□ -0.27
XRCC3-213ENST00000555451 PIH1D3Q9NQM4 214 aaKnown RBP13.38□□□□□ -0.27
XRCC3-213ENST00000555451 MYO5AQ9Y4I1 1855 aaKnown RBP13.38□□□□□ -0.27
XRCC3-213ENST00000555451 COL1A1P02452 1464 aaPredicted RBP13.37□□□□□ -0.27
XRCC3-213ENST00000555451 WTIPA6NIX2 430 aaPredicted RBP13.37□□□□□ -0.27
XRCC3-213ENST00000555451 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
XRCC3-213ENST00000555451 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
XRCC3-213ENST00000555451 ZNF589Q86UQ0 364 aaPredicted RBP13.37□□□□□ -0.27
XRCC3-213ENST00000555451 TBC1D16Q8TBP0 767 aa13.37□□□□□ -0.27
XRCC3-213ENST00000555451 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
XRCC3-213ENST00000555451 MAST2Q6P0Q8 1798 aa13.37□□□□□ -0.27
XRCC3-213ENST00000555451 MAST3O60307 1309 aa13.37□□□□□ -0.27
XRCC3-213ENST00000555451 FRAT2O75474 233 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-213ENST00000555451 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
XRCC3-213ENST00000555451 PTH1RQ03431 593 aa13.36□□□□□ -0.27
XRCC3-213ENST00000555451 SLC9C2Q5TAH2 1124 aa13.36□□□□□ -0.27
XRCC3-213ENST00000555451 TMED8Q6PL24 325 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-213ENST00000555451 MPNDQ8N594 471 aa13.36□□□□□ -0.27
XRCC3-213ENST00000555451 DAXXQ9UER7 740 aaPredicted RBP13.36□□□□□ -0.27
XRCC3-213ENST00000555451 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 CHGBP05060 677 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 PDE6AP16499 860 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 RNF20Q5VTR2 975 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 CC2D2BQ6DHV5 1058 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 PRPF40BQ6NWY9 871 aaKnown RBP13.35□□□□□ -0.27
XRCC3-213ENST00000555451 TXNRD3Q86VQ6 643 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 ZGPATQ8N5A5 531 aaKnown RBP13.35□□□□□ -0.27
XRCC3-213ENST00000555451 TDRD7Q8NHU6 1098 aaKnown RBP13.35□□□□□ -0.27
XRCC3-213ENST00000555451 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 OSBP2Q969R2 916 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 SNX21Q969T3 373 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 SEC62Q99442 399 aaKnown RBP13.35□□□□□ -0.27
XRCC3-213ENST00000555451 DSCC1Q9BVC3 393 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 IQSEC3Q9UPP2 1182 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-213ENST00000555451 RBM8AQ9Y5S9 174 aaKnown RBP13.35□□□□□ -0.27
XRCC3-213ENST00000555451 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
XRCC3-213ENST00000555451 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
XRCC3-213ENST00000555451 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 M0R2C6 588 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 GRIPAP1Q4V328 841 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 DPP8Q6V1X1 898 aaPredicted RBP13.34□□□□□ -0.27
XRCC3-213ENST00000555451 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 SLC51AQ86UW1 340 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 KCNB2Q92953 911 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 EYA3Q99504 573 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 POLLQ9UGP5 575 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 ZNF532Q9HCE3 1301 aa13.34□□□□□ -0.27
XRCC3-213ENST00000555451 CCDC88AQ3V6T2 1871 aa13.33□□□□□ -0.27
XRCC3-213ENST00000555451 C21orf2O43822 256 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 IL1R1P14778 569 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 ZKSCAN1P17029 563 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-213ENST00000555451 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.28
XRCC3-213ENST00000555451 HSCBQ8IWL3 235 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 COA1Q9GZY4 146 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 CD209Q9NNX6 404 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 ABCF2Q9UG63 623 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 PALD1Q9ULE6 856 aa13.33□□□□□ -0.28
XRCC3-213ENST00000555451 GPAA1O43292 621 aa13.32□□□□□ -0.28
XRCC3-213ENST00000555451 ST18O60284 1047 aa13.32□□□□□ -0.28
XRCC3-213ENST00000555451 HSPD1P10809 573 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms