RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 OSBP2Q969R2 916 aa12.26□□□□□ -0.45
NEK9-205ENST00000555405 DENND2AQ9ULE3 1009 aa12.26□□□□□ -0.45
NEK9-205ENST00000555405 KLRG2A4D1S0 409 aaPredicted RBP12.26□□□□□ -0.45
NEK9-205ENST00000555405 SGSM2O43147 1006 aa12.26□□□□□ -0.45
NEK9-205ENST00000555405 RBM5P52756 815 aaKnown RBP eCLIP12.26□□□□□ -0.45
NEK9-205ENST00000555405 STYK1Q6J9G0 422 aa12.26□□□□□ -0.45
NEK9-205ENST00000555405 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
NEK9-205ENST00000555405 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
NEK9-205ENST00000555405 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
NEK9-205ENST00000555405 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
NEK9-205ENST00000555405 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
NEK9-205ENST00000555405 VPS53Q5VIR6 699 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 UPF3BQ9BZI7 483 aaKnown RBP12.25□□□□□ -0.45
NEK9-205ENST00000555405 FHDC1Q9C0D6 1143 aaPredicted RBP12.25□□□□□ -0.45
NEK9-205ENST00000555405 HIP1O00291 1037 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 RAD17O75943 681 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 PDE6AP16499 860 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 SCNN1DP51172 638 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 TTF1Q15361 905 aaPredicted RBP12.25□□□□□ -0.45
NEK9-205ENST00000555405 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 MFSD14BQ5SR56 506 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 TOMM22Q9NS69 142 aa12.25□□□□□ -0.45
NEK9-205ENST00000555405 MCCP23508 829 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 ARID4AP29374 1257 aaPredicted RBP12.24□□□□□ -0.45
NEK9-205ENST00000555405 LRRFIP1Q32MZ4 808 aaKnown RBP12.24□□□□□ -0.45
NEK9-205ENST00000555405 NAA16Q6N069 864 aaPredicted RBP12.24□□□□□ -0.45
NEK9-205ENST00000555405 USP26Q9BXU7 913 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 TNRC6CQ9HCJ0 1690 aaKnown RBP12.24□□□□□ -0.45
NEK9-205ENST00000555405 DDX60Q8IY21 1712 aaKnown RBP12.24□□□□□ -0.45
NEK9-205ENST00000555405 GRIK5Q16478 980 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 ARHGAP27Q6ZUM4 889 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 EYA3Q99504 573 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 M0R2C6 588 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 CCDC93Q567U6 631 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 TUBGCP6Q96RT7 1819 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
NEK9-205ENST00000555405 MBD4O95243 580 aa12.23□□□□□ -0.45
NEK9-205ENST00000555405 LDHBP07195 334 aaKnown RBP12.23□□□□□ -0.45
NEK9-205ENST00000555405 CPA1P15085 419 aa12.23□□□□□ -0.45
NEK9-205ENST00000555405 DYNLL1P63167 89 aaKnown RBP12.23□□□□□ -0.45
NEK9-205ENST00000555405 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
NEK9-205ENST00000555405 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
NEK9-205ENST00000555405 PALD1Q9ULE6 856 aa12.23□□□□□ -0.45
NEK9-205ENST00000555405 KCNA3P22001 575 aa12.23□□□□□ -0.45
NEK9-205ENST00000555405 PTGER2P43116 358 aa12.23□□□□□ -0.45
NEK9-205ENST00000555405 NAP1L2Q9ULW6 460 aaPredicted RBP12.23□□□□□ -0.45
NEK9-205ENST00000555405 GPAA1O43292 621 aa12.22□□□□□ -0.45
NEK9-205ENST00000555405 ZSCAN25Q6NSZ9 544 aa12.22□□□□□ -0.45
NEK9-205ENST00000555405 TBC1D32Q96NH3 1257 aa12.22□□□□□ -0.45
NEK9-205ENST00000555405 RBM8AQ9Y5S9 174 aaKnown RBP12.22□□□□□ -0.45
NEK9-205ENST00000555405 PRKAB2O43741 272 aa12.22□□□□□ -0.45
NEK9-205ENST00000555405 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
NEK9-205ENST00000555405 DTNBO60941 627 aa12.22□□□□□ -0.45
NEK9-205ENST00000555405 HSP90AA1P07900 732 aaKnown RBP12.22□□□□□ -0.45
NEK9-205ENST00000555405 MAST3O60307 1309 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 RASSF7Q02833 373 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 MECOMQ03112 1051 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 SDR42E1Q8WUS8 393 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 APPBP2Q92624 585 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 ADD2P35612 726 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 NEK4P51957 841 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 TGFB2P61812 414 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 FGD1P98174 961 aa12.21□□□□□ -0.45
NEK9-205ENST00000555405 RBM26Q5T8P6 1007 aaKnown RBP12.21□□□□□ -0.45
NEK9-205ENST00000555405 ECE2O60344 883 aa12.21□□□□□ -0.46
NEK9-205ENST00000555405 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.46
NEK9-205ENST00000555405 TDRD7Q8NHU6 1098 aaKnown RBP12.21□□□□□ -0.46
NEK9-205ENST00000555405 WDR66Q8TBY9 1149 aa12.21□□□□□ -0.46
NEK9-205ENST00000555405 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.46
NEK9-205ENST00000555405 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.46
NEK9-205ENST00000555405 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.46
NEK9-205ENST00000555405 CCDC171Q6TFL3 1326 aa12.2□□□□□ -0.46
NEK9-205ENST00000555405 TDO2P48775 406 aa12.2□□□□□ -0.46
NEK9-205ENST00000555405 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
NEK9-205ENST00000555405 NOL10Q9BSC4 688 aaKnown RBP12.2□□□□□ -0.46
NEK9-205ENST00000555405 TTF2Q9UNY4 1162 aaKnown RBP12.2□□□□□ -0.46
NEK9-205ENST00000555405 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
NEK9-205ENST00000555405 ZFYP08048 801 aaPredicted RBP12.2□□□□□ -0.46
NEK9-205ENST00000555405 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
NEK9-205ENST00000555405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.2□□□□□ -0.46
NEK9-205ENST00000555405 PODXL2Q9NZ53 605 aa12.2□□□□□ -0.46
NEK9-205ENST00000555405 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
NEK9-205ENST00000555405 ADGRA1Q86SQ6 560 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 JDP2Q8WYK2 163 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 JAKMIP1Q96N16 626 aaKnown RBP12.19□□□□□ -0.46
NEK9-205ENST00000555405 COA1Q9GZY4 146 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 LSG1Q9H089 658 aaKnown RBP12.19□□□□□ -0.46
NEK9-205ENST00000555405 GPR162Q16538 588 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
NEK9-205ENST00000555405 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms