RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 AKAP2Q9Y2D5 859 aa27.99■■■□□ 2.07
STRN3-207ENST00000555358 ZPR1O75312 459 aa27.98■■■□□ 2.07
STRN3-207ENST00000555358 DNTTIP2Q5QJE6 756 aaKnown RBP27.98■■■□□ 2.07
STRN3-207ENST00000555358 BLOC1S2Q6QNY1 142 aa27.98■■■□□ 2.07
STRN3-207ENST00000555358 XAGE2Q96GT9 111 aa27.98■■■□□ 2.07
STRN3-207ENST00000555358 SPEF2Q9C093 1822 aa27.98■■■□□ 2.07
STRN3-207ENST00000555358 CCDC192P0DO97 292 aa27.98■■■□□ 2.07
STRN3-207ENST00000555358 RPS6KB1P23443 525 aa27.98■■■□□ 2.07
STRN3-207ENST00000555358 RBM6P78332 1123 aaKnown RBP27.98■■■□□ 2.07
STRN3-207ENST00000555358 DDX46Q7L014 1031 aaKnown RBP27.98■■■□□ 2.07
STRN3-207ENST00000555358 PRIMPOLQ96LW4 560 aa27.98■■■□□ 2.07
STRN3-207ENST00000555358 LRP5O75197 1615 aa27.97■■■□□ 2.07
STRN3-207ENST00000555358 CHGBP05060 677 aa27.97■■■□□ 2.07
STRN3-207ENST00000555358 TOB2Q14106 344 aaPredicted RBP27.97■■■□□ 2.07
STRN3-207ENST00000555358 ANKRD1Q15327 319 aa27.97■■■□□ 2.07
STRN3-207ENST00000555358 ZNF772Q68DY9 489 aaPredicted RBP27.97■■■□□ 2.07
STRN3-207ENST00000555358 MTERF4Q7Z6M4 381 aaKnown RBP27.97■■■□□ 2.07
STRN3-207ENST00000555358 VGLL2Q8N8G2 317 aa27.97■■■□□ 2.07
STRN3-207ENST00000555358 CASZ1Q86V15 1759 aa27.97■■■□□ 2.07
STRN3-207ENST00000555358 PDCP20941 246 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 RNF20Q5VTR2 975 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 FERMT3Q86UX7 667 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 TCEANC2Q96MN5 208 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 CCDC152Q4G0S7 254 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 FAM173BQ6P4H8 233 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 C3orf67Q6ZVT6 689 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 ZNF589Q86UQ0 364 aaPredicted RBP27.96■■■□□ 2.07
STRN3-207ENST00000555358 COL4A1P02462 1669 aa27.96■■■□□ 2.07
STRN3-207ENST00000555358 ATP2B3Q16720 1220 aa27.95■■■□□ 2.07
STRN3-207ENST00000555358 LIG1P18858 919 aa27.95■■■□□ 2.06
STRN3-207ENST00000555358 TSGA10IPQ3SY00 556 aa27.95■■■□□ 2.06
STRN3-207ENST00000555358 KCNF1Q9H3M0 494 aa27.95■■■□□ 2.06
STRN3-207ENST00000555358 GOLIM4O00461 696 aa27.94■■■□□ 2.06
STRN3-207ENST00000555358 RGL2O15211 777 aa27.94■■■□□ 2.06
STRN3-207ENST00000555358 IFIT1P09914 478 aaKnown RBP27.94■■■□□ 2.06
STRN3-207ENST00000555358 PLCB2Q00722 1185 aa27.94■■■□□ 2.06
STRN3-207ENST00000555358 HELBQ8NG08 1087 aaPredicted RBP27.94■■■□□ 2.06
STRN3-207ENST00000555358 TAF1P21675 1872 aa27.94■■■□□ 2.06
STRN3-207ENST00000555358 GORABQ5T7V8 394 aa27.94■■■□□ 2.06
STRN3-207ENST00000555358 TRAPPC3LQ5T215 181 aa27.93■■■□□ 2.06
STRN3-207ENST00000555358 SETDB2Q96T68 719 aa27.93■■■□□ 2.06
STRN3-207ENST00000555358 PAG1Q9NWQ8 432 aa27.93■■■□□ 2.06
STRN3-207ENST00000555358 HMG20BQ9P0W2 317 aa27.93■■■□□ 2.06
STRN3-207ENST00000555358 COL24A1Q17RW2 1714 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 PDE8BO95263 885 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 GTF2F1P35269 517 aaKnown RBP eCLIP27.92■■■□□ 2.06
STRN3-207ENST00000555358 HMGN5P82970 282 aaKnown RBP27.92■■■□□ 2.06
STRN3-207ENST00000555358 MAP3K11Q16584 847 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 FAM200AQ8TCP9 573 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 NUP62CLQ9H1M0 184 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 ABCC12Q96J65 1359 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 HSP90B1P14625 803 aaKnown RBP27.92■■■□□ 2.06
STRN3-207ENST00000555358 RFC4P35249 363 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 KIAA1524Q8TCG1 905 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 MRVI1Q9Y6F6 885 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 UBR3Q6ZT12 1888 aa27.92■■■□□ 2.06
STRN3-207ENST00000555358 TAF5LO75529 589 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 CCDC158Q5M9N0 1113 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 TTC39AQ5SRH9 613 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 MPHOSPH8Q99549 860 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 RTL9Q8NET4 1388 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 GTF2E1P29083 439 aaPredicted RBP27.91■■■□□ 2.06
STRN3-207ENST00000555358 SCARF1Q14162 830 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 CCDC24Q8N4L8 307 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 KBTBD3Q8NAB2 608 aa27.91■■■□□ 2.06
STRN3-207ENST00000555358 TPM3P06753 285 aa27.9■■■□□ 2.06
STRN3-207ENST00000555358 TYRO3Q06418 890 aa27.9■■■□□ 2.06
STRN3-207ENST00000555358 SCAND2PQ9GZW5 306 aaPredicted RBP27.9■■■□□ 2.06
STRN3-207ENST00000555358 PYCARDQ9ULZ3 195 aa27.9■■■□□ 2.06
STRN3-207ENST00000555358 SNAP23O00161 211 aa27.89■■■□□ 2.06
STRN3-207ENST00000555358 SLFNL1Q499Z3 407 aa27.89■■■□□ 2.06
STRN3-207ENST00000555358 NBPF5PQ86XG9 351 aaPredicted RBP27.89■■■□□ 2.06
STRN3-207ENST00000555358 MROH5Q6ZUA9 1318 aa27.88■■■□□ 2.05
STRN3-207ENST00000555358 CAMK4Q16566 473 aa27.88■■■□□ 2.05
STRN3-207ENST00000555358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.88■■■□□ 2.05
STRN3-207ENST00000555358 FKBP4Q02790 459 aaKnown RBP eCLIP27.88■■■□□ 2.05
STRN3-207ENST00000555358 RBM43Q6ZSC3 357 aaKnown RBP27.88■■■□□ 2.05
STRN3-207ENST00000555358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.88■■■□□ 2.05
STRN3-207ENST00000555358 SEC62Q99442 399 aaKnown RBP27.88■■■□□ 2.05
STRN3-207ENST00000555358 SLC27A3Q5K4L6 730 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 PROM2Q8N271 834 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 LEO1Q8WVC0 666 aaPredicted RBP27.87■■■□□ 2.05
STRN3-207ENST00000555358 SPATA32Q96LK8 384 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 DACT1Q9NYF0 836 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 IGHMBP2P38935 993 aaKnown RBP27.87■■■□□ 2.05
STRN3-207ENST00000555358 STK3Q13188 491 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 SLC10A5Q5PT55 438 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 PI16Q6UXB8 463 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 SPC24Q8NBT2 197 aa27.87■■■□□ 2.05
STRN3-207ENST00000555358 RFX7Q2KHR2 1363 aa27.86■■■□□ 2.05
STRN3-207ENST00000555358 AKAP11Q9UKA4 1901 aa27.86■■■□□ 2.05
STRN3-207ENST00000555358 SF3B3Q15393 1217 aaKnown RBP27.86■■■□□ 2.05
STRN3-207ENST00000555358 NYXQ9GZU5 481 aa27.86■■■□□ 2.05
STRN3-207ENST00000555358 TFIP11Q9UBB9 837 aaKnown RBP27.86■■■□□ 2.05
STRN3-207ENST00000555358 FGFR2P21802 821 aa27.86■■■□□ 2.05
STRN3-207ENST00000555358 TNMDQ9H2S6 317 aa27.86■■■□□ 2.05
STRN3-207ENST00000555358 PUM3Q15397 648 aaKnown RBP27.85■■■□□ 2.05
STRN3-207ENST00000555358 CCDC129Q6ZRS4 1044 aa27.85■■■□□ 2.05
STRN3-207ENST00000555358 GTF3C6Q969F1 213 aa27.85■■■□□ 2.05
STRN3-207ENST00000555358 KRT32Q14532 448 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms