RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 ECE2O60344 883 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 LRRC24Q50LG9 513 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 LDHAL6AQ6ZMR3 332 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
TRIM9-204ENST00000555170 KCNQ5Q9NR82 932 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 CNNM1Q9NRU3 951 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 A0A0C4DFX4 3053 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 MYH13Q9UKX3 1938 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 ZNF804BA4D1E1 1349 aa10.52□□□□□ -0.73
TRIM9-204ENST00000555170 EGFRP00533 1210 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 GNAI3P08754 354 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 PTPN12Q05209 780 aaKnown RBP10.51□□□□□ -0.73
TRIM9-204ENST00000555170 TNIP1Q15025 636 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 TBC1D10BQ4KMP7 808 aaPredicted RBP10.51□□□□□ -0.73
TRIM9-204ENST00000555170 ITPRIPQ8IWB1 547 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 MICALL2Q8IY33 904 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
TRIM9-204ENST00000555170 ZC3H12CQ9C0D7 883 aaKnown RBP10.51□□□□□ -0.73
TRIM9-204ENST00000555170 ANKRD2Q9GZV1 360 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 LEMD3Q9Y2U8 911 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 ZBTB12Q9Y330 459 aaPredicted RBP10.51□□□□□ -0.73
TRIM9-204ENST00000555170 RIPOR2Q9Y4F9 1068 aa10.51□□□□□ -0.73
TRIM9-204ENST00000555170 GPR25O00155 361 aa10.5□□□□□ -0.73
TRIM9-204ENST00000555170 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
TRIM9-204ENST00000555170 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
TRIM9-204ENST00000555170 RASAL3Q86YV0 1011 aa10.5□□□□□ -0.73
TRIM9-204ENST00000555170 VGLL2Q8N8G2 317 aa10.5□□□□□ -0.73
TRIM9-204ENST00000555170 PA2G4Q9UQ80 394 aaKnown RBP10.5□□□□□ -0.73
TRIM9-204ENST00000555170 PNMA6EA0A0J9YXQ4 647 aa10.49□□□□□ -0.73
TRIM9-204ENST00000555170 PSMD14O00487 310 aa10.49□□□□□ -0.73
TRIM9-204ENST00000555170 ZBTB7BO15156 539 aaPredicted RBP10.49□□□□□ -0.73
TRIM9-204ENST00000555170 GNAI2P04899 355 aa10.49□□□□□ -0.73
TRIM9-204ENST00000555170 MTX1Q13505 466 aa10.49□□□□□ -0.73
TRIM9-204ENST00000555170 ATG9AQ7Z3C6 839 aa10.49□□□□□ -0.73
TRIM9-204ENST00000555170 DCPSQ96C86 337 aaKnown RBP10.49□□□□□ -0.73
TRIM9-204ENST00000555170 SIL1Q9H173 461 aa10.49□□□□□ -0.73
TRIM9-204ENST00000555170 ZNF609O15014 1411 aa10.49□□□□□ -0.73
TRIM9-204ENST00000555170 EYA2O00167 538 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 SRGAP3O43295 1099 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 EN2P19622 333 aaPredicted RBP10.48□□□□□ -0.73
TRIM9-204ENST00000555170 KCNJ4P48050 445 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 MVPQ14764 893 aaKnown RBP10.48□□□□□ -0.73
TRIM9-204ENST00000555170 METTL24Q5JXM2 366 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 C15orf52Q6ZUT6 534 aaKnown RBP10.48□□□□□ -0.73
TRIM9-204ENST00000555170 R3HDMLQ9H3Y0 253 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 COG6Q9Y2V7 657 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 MROH5Q6ZUA9 1318 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 CUL9Q8IWT3 2517 aa10.48□□□□□ -0.73
TRIM9-204ENST00000555170 POLR2AP24928 1970 aaKnown RBP10.47□□□□□ -0.73
TRIM9-204ENST00000555170 G3V3G9 751 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 DCAF8Q5TAQ9 597 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 DPF2Q92785 391 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 CDCA5Q96FF9 252 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 MXD3Q9BW11 206 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 COA1Q9GZY4 146 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 COPRSQ9NQ92 184 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 HDAC5Q9UQL6 1122 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 TRIOBPQ9H2D6 2365 aa10.47□□□□□ -0.73
TRIM9-204ENST00000555170 FKTNO75072 461 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 CIAO1O76071 339 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 PDE8BO95263 885 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 VIL1P09327 827 aaKnown RBP10.46□□□□□ -0.73
TRIM9-204ENST00000555170 FGFR2P21802 821 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 TM4SF4P48230 202 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 UBE4AQ14139 1066 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.73
TRIM9-204ENST00000555170 MOB2Q70IA6 237 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 PODNQ7Z5L7 613 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 CD209Q9NNX6 404 aa10.46□□□□□ -0.73
TRIM9-204ENST00000555170 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.46□□□□□ -0.73
TRIM9-204ENST00000555170 ASTN2O75129 1339 aaPredicted RBP10.46□□□□□ -0.73
TRIM9-204ENST00000555170 COL1A1P02452 1464 aaPredicted RBP10.46□□□□□ -0.74
TRIM9-204ENST00000555170 ECM29Q5VYK3 1845 aa10.46□□□□□ -0.74
TRIM9-204ENST00000555170 CENPFP49454 3210 aa10.46□□□□□ -0.74
TRIM9-204ENST00000555170 BRCA2P51587 3418 aa10.46□□□□□ -0.74
TRIM9-204ENST00000555170 GYG1P46976 350 aa10.45□□□□□ -0.74
TRIM9-204ENST00000555170 POLA2Q14181 598 aa10.45□□□□□ -0.74
TRIM9-204ENST00000555170 DACT2Q5SW24 774 aa10.45□□□□□ -0.74
TRIM9-204ENST00000555170 RSBN1LQ6PCB5 846 aaPredicted RBP10.45□□□□□ -0.74
TRIM9-204ENST00000555170 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
TRIM9-204ENST00000555170 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
TRIM9-204ENST00000555170 OTUD5Q96G74 571 aa10.45□□□□□ -0.74
TRIM9-204ENST00000555170 HTTP42858 3142 aa10.45□□□□□ -0.74
TRIM9-204ENST00000555170 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 H0YGN5 161 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 UBE2Q2LH0YL09 131 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 MS4A1P11836 297 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 IL1R1P14778 569 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 IL15P40933 162 aaPredicted RBP10.44□□□□□ -0.74
TRIM9-204ENST00000555170 RRP1P56182 461 aaKnown RBP10.44□□□□□ -0.74
TRIM9-204ENST00000555170 GTF2IP78347 998 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 ATP8B2P98198 1209 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 PDE3AQ14432 1141 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 PUM3Q15397 648 aaKnown RBP10.44□□□□□ -0.74
TRIM9-204ENST00000555170 CEP85Q6P2H3 762 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 ZNF804AQ7Z570 1209 aa10.44□□□□□ -0.74
TRIM9-204ENST00000555170 SSH3Q8TE77 659 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms