RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZNF830Q96NB3 372 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-216ENST00000555002 CCT6AP40227 531 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 UIMC1Q96RL1 719 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 NAP1L4Q99733 375 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 SAP30BPQ9UHR5 308 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 RAB3GAP1Q15042 981 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 DHX58Q96C10 678 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 MCM5P33992 734 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 KARSQ15046 597 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 ARID4AP29374 1257 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 RILPL1Q5EBL4 403 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 KCNH5Q8NCM2 988 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 POMGNT1Q8WZA1 660 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 GOLGA4Q13439 2230 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 ATP6V1AP38606 617 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 KRT23Q9C075 422 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 KIF9Q9HAQ2 790 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 TMOD4Q9NZQ9 345 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 MTRF1LQ9UGC7 380 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 ZBTB43O43298 467 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 SPOPO43791 374 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 SORBS3O60504 671 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 CTNND2Q9UQB3 1225 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 PARD3BQ8TEW8 1205 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 NCAPGQ9BPX3 1015 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 ZNF692Q9BU19 519 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 ABL1P00519 1130 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 RHOXF2BP0C7M4 288 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 FYB2Q5VWT5 728 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 NAA16Q6N069 864 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 PDCD7Q8N8D1 485 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 RHOXF2Q9BQY4 288 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 DDX19AQ9NUU7 478 aaKnown RBP7.74□□□□□ -1.17
SYNE2-216ENST00000555002 GUCA1BQ9UMX6 200 aa7.74□□□□□ -1.17
SYNE2-216ENST00000555002 ANKRD50Q9ULJ7 1429 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 TXNDC9O14530 226 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 XRCC6P12956 609 aaKnown RBP eCLIP7.73□□□□□ -1.17
SYNE2-216ENST00000555002 MAN1A1P33908 653 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 NSMCE1Q8WV22 266 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.73□□□□□ -1.17
SYNE2-216ENST00000555002 MED10Q9BTT4 135 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 I3L4J1 428 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 ALG1Q9BT22 464 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 LEO1Q8WVC0 666 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-216ENST00000555002 MYCLP12524 364 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-216ENST00000555002 LDHAL6AQ6ZMR3 332 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 ZGPATQ8N5A5 531 aaKnown RBP7.73□□□□□ -1.17
SYNE2-216ENST00000555002 PSMA7O14818 248 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 NBPF1Q3BBV0 1214 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 RNF169Q8NCN4 708 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 RTL9Q8NET4 1388 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 SRGAP1Q7Z6B7 1085 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 SDCCAG8Q86SQ7 713 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-216ENST00000555002 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 NECAB1Q8N987 351 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 PDIA4P13667 645 aaKnown RBP7.73□□□□□ -1.17
SYNE2-216ENST00000555002 MAGEB6P1A0A0J9YX57 407 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 PRKG1Q13976 671 aa7.73□□□□□ -1.17
SYNE2-216ENST00000555002 TMPOP42166 694 aaKnown RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 SF3A3Q12874 501 aaKnown RBP eCLIP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 BRDTQ58F21 947 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 CCDC62Q6P9F0 684 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 ESR2Q92731 530 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 OATP04181 439 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 NBPF7P0C2Y1 421 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 MAP7Q14244 749 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 TMTC4Q5T4D3 741 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 HS2ST1Q7LGA3 356 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 LCA5Q86VQ0 697 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 TTC30BQ8N4P2 665 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 CTAGE1Q96RT6 745 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 VPS18Q9P253 973 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 DNAI1Q9UI46 699 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 USTQ9Y2C2 406 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 PCK1P35558 622 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 VCX3BQ9H321 246 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 GPCPD1Q9NPB8 672 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 ESYT2A0FGR8 921 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 ZNF165P49910 485 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 AMOTQ4VCS5 1084 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 NUDT16Q96DE0 195 aaKnown RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 FNBP1Q96RU3 617 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 PTPDC1A2A3K4 754 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 CDR2Q01850 454 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 ITKQ08881 620 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 EVI5LQ96CN4 794 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 EPB41P11171 864 aaKnown RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 KRT2P35908 639 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 ATP11AP98196 1134 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 EAPPQ56P03 285 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 GPIHBP1Q8IV16 184 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 GOLGA6CA6NDK9 693 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 GOLGA6BA6NDN3 693 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 UBAP1LF5GYI3 381 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 M0QZ92 97 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 KRT19P08727 400 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 GOLGA6DP0CG33 693 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 FCHSD1Q86WN1 690 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms