RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 JDP2Q8WYK2 163 aa21■□□□□ 0.95
SHOX-204ENST00000554971 XAGE2Q96GT9 111 aa21■□□□□ 0.95
SHOX-204ENST00000554971 AKAP11Q9UKA4 1901 aa21■□□□□ 0.95
SHOX-204ENST00000554971 K7ELQ4 463 aaPredicted RBP21■□□□□ 0.95
SHOX-204ENST00000554971 NIM1KQ8IY84 436 aa21■□□□□ 0.95
SHOX-204ENST00000554971 LRRCC1Q9C099 1032 aa21■□□□□ 0.95
SHOX-204ENST00000554971 CD209Q9NNX6 404 aa21■□□□□ 0.95
SHOX-204ENST00000554971 DBNLQ9UJU6 430 aaKnown RBP21■□□□□ 0.95
SHOX-204ENST00000554971 ZNRF3Q9ULT6 936 aa21■□□□□ 0.95
SHOX-204ENST00000554971 ZNF541Q9H0D2 1346 aa20.99■□□□□ 0.95
SHOX-204ENST00000554971 NEUROD6Q96NK8 337 aa20.99■□□□□ 0.95
SHOX-204ENST00000554971 DBNDD2Q9BQY9 259 aa20.99■□□□□ 0.95
SHOX-204ENST00000554971 REC8O95072 547 aa20.98■□□□□ 0.95
SHOX-204ENST00000554971 HIBADHP31937 336 aaKnown RBP20.98■□□□□ 0.95
SHOX-204ENST00000554971 PHKA1P46020 1223 aa20.98■□□□□ 0.95
SHOX-204ENST00000554971 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
SHOX-204ENST00000554971 COA1Q9GZY4 146 aa20.98■□□□□ 0.95
SHOX-204ENST00000554971 CCDC8Q9H0W5 538 aaPredicted RBP20.98■□□□□ 0.95
SHOX-204ENST00000554971 COL1A1P02452 1464 aaPredicted RBP20.98■□□□□ 0.95
SHOX-204ENST00000554971 IL1R1P14778 569 aa20.98■□□□□ 0.95
SHOX-204ENST00000554971 PODNQ7Z5L7 613 aa20.98■□□□□ 0.95
SHOX-204ENST00000554971 IL27Q8NEV9 243 aa20.98■□□□□ 0.95
SHOX-204ENST00000554971 USP26Q9BXU7 913 aa20.98■□□□□ 0.95
SHOX-204ENST00000554971 CXCL9Q07325 125 aa20.97■□□□□ 0.95
SHOX-204ENST00000554971 CCDC102BQ68D86 513 aa20.97■□□□□ 0.95
SHOX-204ENST00000554971 ZNF804AQ7Z570 1209 aa20.97■□□□□ 0.95
SHOX-204ENST00000554971 AACSQ86V21 672 aa20.97■□□□□ 0.95
SHOX-204ENST00000554971 C16orf71Q8IYS4 520 aaPredicted RBP20.97■□□□□ 0.95
SHOX-204ENST00000554971 IQSEC3Q9UPP2 1182 aaPredicted RBP20.97■□□□□ 0.95
SHOX-204ENST00000554971 RAD17O75943 681 aa20.96■□□□□ 0.95
SHOX-204ENST00000554971 SDSP20132 328 aa20.96■□□□□ 0.95
SHOX-204ENST00000554971 ZC3H4Q9UPT8 1303 aaKnown RBP20.96■□□□□ 0.95
SHOX-204ENST00000554971 CAVIN4Q5BKX8 364 aa20.96■□□□□ 0.95
SHOX-204ENST00000554971 TDRD7Q8NHU6 1098 aaKnown RBP20.96■□□□□ 0.95
SHOX-204ENST00000554971 CLASRPQ8N2M8 674 aaKnown RBP20.95■□□□□ 0.94
SHOX-204ENST00000554971 PDE1AP54750 535 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 SPRYD3Q8NCJ5 442 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 GBP4Q96PP9 640 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 MYO5AQ9Y4I1 1855 aaKnown RBP20.94■□□□□ 0.94
SHOX-204ENST00000554971 G3V3G9 751 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 RAB3GAP1Q15042 981 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 DCAF8Q5TAQ9 597 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 VPS37DQ86XT2 251 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 JAG2Q9Y219 1238 aa20.94■□□□□ 0.94
SHOX-204ENST00000554971 AOX1Q06278 1338 aa20.93■□□□□ 0.94
SHOX-204ENST00000554971 PSMD14O00487 310 aa20.93■□□□□ 0.94
SHOX-204ENST00000554971 OTUD7AQ8TE49 926 aaPredicted RBP20.93■□□□□ 0.94
SHOX-204ENST00000554971 HSP90AA1P07900 732 aaKnown RBP20.92■□□□□ 0.94
SHOX-204ENST00000554971 SCARF1Q14162 830 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 MXD3Q9BW11 206 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 ISY1Q9ULR0 285 aaKnown RBP20.92■□□□□ 0.94
SHOX-204ENST00000554971 SALL3Q9BXA9 1300 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 ERC2O15083 957 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 EPB41L2O43491 1005 aaKnown RBP20.92■□□□□ 0.94
SHOX-204ENST00000554971 DDNO94850 711 aaPredicted RBP20.92■□□□□ 0.94
SHOX-204ENST00000554971 EIF6P56537 245 aaKnown RBP20.92■□□□□ 0.94
SHOX-204ENST00000554971 GTF2IP78347 998 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 RASGRF1Q13972 1273 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 CLEC17AQ6ZS10 378 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 STAP2Q9UGK3 403 aa20.92■□□□□ 0.94
SHOX-204ENST00000554971 ARID4AP29374 1257 aaPredicted RBP20.91■□□□□ 0.94
SHOX-204ENST00000554971 SKOR2Q2VWA4 1001 aaPredicted RBP20.91■□□□□ 0.94
SHOX-204ENST00000554971 DACT2Q5SW24 774 aa20.91■□□□□ 0.94
SHOX-204ENST00000554971 CIAPIN1Q6FI81 312 aa20.91■□□□□ 0.94
SHOX-204ENST00000554971 PI16Q6UXB8 463 aa20.91■□□□□ 0.94
SHOX-204ENST00000554971 USP17L3A6NCW0 530 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 USP17L4A6NCW7 530 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 GLTPD2A6NH11 291 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 VIL1P09327 827 aaKnown RBP20.9■□□□□ 0.94
SHOX-204ENST00000554971 MCAMP43121 646 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 TTLL5Q6EMB2 1281 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 USP17L1Q7RTZ2 530 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 GPC2Q8N158 579 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 ZBTB12Q9Y330 459 aaPredicted RBP20.9■□□□□ 0.94
SHOX-204ENST00000554971 FAM205AQ6ZU69 1335 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 TRAK2O60296 914 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 IFIT2P09913 472 aaKnown RBP20.9■□□□□ 0.94
SHOX-204ENST00000554971 GORABQ5T7V8 394 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 STRIP1Q5VSL9 837 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 CERS5Q8N5B7 392 aa20.9■□□□□ 0.94
SHOX-204ENST00000554971 ZBTB22O15209 634 aa20.89■□□□□ 0.93
SHOX-204ENST00000554971 GJA3Q9Y6H8 435 aa20.89■□□□□ 0.93
SHOX-204ENST00000554971 WDR90Q96KV7 1748 aa20.89■□□□□ 0.93
SHOX-204ENST00000554971 ST18O60284 1047 aa20.88■□□□□ 0.93
SHOX-204ENST00000554971 CWC22Q9HCG8 908 aaKnown RBP20.88■□□□□ 0.93
SHOX-204ENST00000554971 TSHZ3Q63HK5 1081 aa20.88■□□□□ 0.93
SHOX-204ENST00000554971 ZNF512BQ96KM6 892 aaPredicted RBP20.88■□□□□ 0.93
SHOX-204ENST00000554971 GMLQ99445 158 aa20.88■□□□□ 0.93
SHOX-204ENST00000554971 HMG20BQ9P0W2 317 aa20.88■□□□□ 0.93
SHOX-204ENST00000554971 MX1P20591 662 aa20.87■□□□□ 0.93
SHOX-204ENST00000554971 SCNN1DP51172 638 aa20.87■□□□□ 0.93
SHOX-204ENST00000554971 CHAF1AQ13111 956 aaPredicted RBP20.87■□□□□ 0.93
SHOX-204ENST00000554971 TNIP1Q15025 636 aa20.87■□□□□ 0.93
SHOX-204ENST00000554971 GRIK5Q16478 980 aa20.87■□□□□ 0.93
SHOX-204ENST00000554971 CCDC158Q5M9N0 1113 aa20.87■□□□□ 0.93
SHOX-204ENST00000554971 RSBN1LQ6PCB5 846 aaPredicted RBP20.87■□□□□ 0.93
SHOX-204ENST00000554971 TNPO1Q92973 898 aaKnown RBP20.87■□□□□ 0.93
SHOX-204ENST00000554971 FBXW7Q969H0 707 aa20.87■□□□□ 0.93
SHOX-204ENST00000554971 NDUFB9Q9Y6M9 179 aa20.87■□□□□ 0.93
SHOX-204ENST00000554971 SCN4AP35499 1836 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms