RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 TSPYL6Q8N831 410 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 CFHR5Q9BXR6 569 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 CHMP3Q9Y3E7 222 aa12.32□□□□□ -0.44
TMEM253-204ENST00000554844 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
TMEM253-204ENST00000554844 CHRNDQ07001 517 aa12.31□□□□□ -0.44
TMEM253-204ENST00000554844 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
TMEM253-204ENST00000554844 GCKRQ14397 625 aa12.31□□□□□ -0.44
TMEM253-204ENST00000554844 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
TMEM253-204ENST00000554844 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
TMEM253-204ENST00000554844 TSR2Q969E8 191 aaKnown RBP12.31□□□□□ -0.44
TMEM253-204ENST00000554844 PLA2G12BQ9BX93 195 aa12.31□□□□□ -0.44
TMEM253-204ENST00000554844 DEFB129Q9H1M3 183 aa12.31□□□□□ -0.44
TMEM253-204ENST00000554844 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
TMEM253-204ENST00000554844 ZBTB48P10074 688 aaPredicted RBP12.3□□□□□ -0.44
TMEM253-204ENST00000554844 IREB2P48200 963 aaKnown RBP12.3□□□□□ -0.44
TMEM253-204ENST00000554844 RBM5P52756 815 aaKnown RBP eCLIP12.3□□□□□ -0.44
TMEM253-204ENST00000554844 TAF7LQ5H9L4 462 aa12.3□□□□□ -0.44
TMEM253-204ENST00000554844 LDLRAD1Q5T700 205 aa12.3□□□□□ -0.44
TMEM253-204ENST00000554844 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
TMEM253-204ENST00000554844 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
TMEM253-204ENST00000554844 VEZTQ9HBM0 779 aa12.3□□□□□ -0.44
TMEM253-204ENST00000554844 TRIM17Q9Y577 477 aa12.3□□□□□ -0.44
TMEM253-204ENST00000554844 UNCXA6NJT0 531 aa12.29□□□□□ -0.44
TMEM253-204ENST00000554844 F8W031 263 aaPredicted RBP12.29□□□□□ -0.44
TMEM253-204ENST00000554844 KLRK1P26718 216 aa12.29□□□□□ -0.44
TMEM253-204ENST00000554844 FLIIQ13045 1269 aa12.29□□□□□ -0.44
TMEM253-204ENST00000554844 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
TMEM253-204ENST00000554844 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
TMEM253-204ENST00000554844 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
TMEM253-204ENST00000554844 WNK4Q96J92 1243 aa12.29□□□□□ -0.44
TMEM253-204ENST00000554844 ZNF646O15015 1829 aaPredicted RBP12.28□□□□□ -0.44
TMEM253-204ENST00000554844 TNFAIP1Q13829 316 aa12.28□□□□□ -0.44
TMEM253-204ENST00000554844 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
TMEM253-204ENST00000554844 G2E3Q7L622 706 aa12.28□□□□□ -0.44
TMEM253-204ENST00000554844 MTMR14Q8NCE2 650 aa12.28□□□□□ -0.44
TMEM253-204ENST00000554844 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
TMEM253-204ENST00000554844 ZBED3Q96IU2 234 aaPredicted RBP12.28□□□□□ -0.44
TMEM253-204ENST00000554844 ECM29Q5VYK3 1845 aa12.27□□□□□ -0.44
TMEM253-204ENST00000554844 CLRN2A0PK11 232 aa12.27□□□□□ -0.45
TMEM253-204ENST00000554844 CSF1RP07333 972 aa12.27□□□□□ -0.45
TMEM253-204ENST00000554844 FKBP1AP62942 108 aaKnown RBP12.27□□□□□ -0.45
TMEM253-204ENST00000554844 ARHGEF6Q15052 776 aa12.27□□□□□ -0.45
TMEM253-204ENST00000554844 MAP3K11Q16584 847 aa12.27□□□□□ -0.45
TMEM253-204ENST00000554844 CCDC27Q2M243 656 aa12.27□□□□□ -0.45
TMEM253-204ENST00000554844 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
TMEM253-204ENST00000554844 CNNM1Q9NRU3 951 aa12.27□□□□□ -0.45
TMEM253-204ENST00000554844 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 PLIN1O60240 522 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 TAF5LO75529 589 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 WDHD1O75717 1129 aaPredicted RBP12.26□□□□□ -0.45
TMEM253-204ENST00000554844 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 C15orf52Q6ZUT6 534 aaKnown RBP12.26□□□□□ -0.45
TMEM253-204ENST00000554844 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 ANKRD13AQ8IZ07 590 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 HELBQ8NG08 1087 aaPredicted RBP12.26□□□□□ -0.45
TMEM253-204ENST00000554844 FZD1Q9UP38 647 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 IL16Q14005 1332 aa12.26□□□□□ -0.45
TMEM253-204ENST00000554844 IL1R1P14778 569 aa12.25□□□□□ -0.45
TMEM253-204ENST00000554844 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
TMEM253-204ENST00000554844 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
TMEM253-204ENST00000554844 CLMNQ96JQ2 1002 aa12.25□□□□□ -0.45
TMEM253-204ENST00000554844 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
TMEM253-204ENST00000554844 EFCC1Q9HA90 598 aa12.25□□□□□ -0.45
TMEM253-204ENST00000554844 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
TMEM253-204ENST00000554844 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
TMEM253-204ENST00000554844 IGF2BP3O00425 579 aaKnown RBP eCLIP12.24□□□□□ -0.45
TMEM253-204ENST00000554844 TNNI2P48788 182 aa12.24□□□□□ -0.45
TMEM253-204ENST00000554844 CASP7P55210 303 aa12.24□□□□□ -0.45
TMEM253-204ENST00000554844 RASA3Q14644 834 aa12.24□□□□□ -0.45
TMEM253-204ENST00000554844 NBPF12Q5TAG4 269 aaPredicted RBP12.24□□□□□ -0.45
TMEM253-204ENST00000554844 CERS5Q8N5B7 392 aa12.24□□□□□ -0.45
TMEM253-204ENST00000554844 CD99L2Q8TCZ2 262 aa12.24□□□□□ -0.45
TMEM253-204ENST00000554844 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
TMEM253-204ENST00000554844 JAG2Q9Y219 1238 aa12.24□□□□□ -0.45
TMEM253-204ENST00000554844 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 SNAP23O00161 211 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 SP3Q02447 781 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 CRHR2Q13324 411 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 LMBR1LQ6UX01 489 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 PRMT6Q96LA8 375 aaPredicted RBP12.23□□□□□ -0.45
TMEM253-204ENST00000554844 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 C9orf78Q9NZ63 289 aaPredicted RBP12.23□□□□□ -0.45
TMEM253-204ENST00000554844 PTPN22Q9Y2R2 807 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 CSADQ9Y600 493 aa12.23□□□□□ -0.45
TMEM253-204ENST00000554844 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
TMEM253-204ENST00000554844 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
TMEM253-204ENST00000554844 USP2O75604 605 aaPredicted RBP12.22□□□□□ -0.45
TMEM253-204ENST00000554844 MFSD14BQ5SR56 506 aa12.22□□□□□ -0.45
TMEM253-204ENST00000554844 NBPF11Q86T75 865 aa12.22□□□□□ -0.45
TMEM253-204ENST00000554844 OPTNQ96CV9 577 aa12.22□□□□□ -0.45
TMEM253-204ENST00000554844 ZFYVE28Q9HCC9 887 aa12.22□□□□□ -0.45
TMEM253-204ENST00000554844 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
TMEM253-204ENST00000554844 TTF2Q9UNY4 1162 aaKnown RBP12.22□□□□□ -0.45
TMEM253-204ENST00000554844 PCDHAC2Q9Y5I4 1007 aa12.22□□□□□ -0.45
TMEM253-204ENST00000554844 A0A1B0GUL6 1792 aa12.21□□□□□ -0.45
TMEM253-204ENST00000554844 IRS2Q9Y4H2 1338 aa12.21□□□□□ -0.45
TMEM253-204ENST00000554844 GRM8O00222 908 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms