RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 SOX17Q9H6I2 414 aaPredicted RBP6.69□□□□□ -1.34
CFAP54-207ENST00000554821 SOX13Q9UN79 622 aa6.69□□□□□ -1.34
CFAP54-207ENST00000554821 A6NHS1 94 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 EREGO14944 169 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 DHX15O43143 795 aaKnown RBP6.68□□□□□ -1.34
CFAP54-207ENST00000554821 TAL1P17542 331 aaPredicted RBP6.68□□□□□ -1.34
CFAP54-207ENST00000554821 C19orf57Q0VDD7 668 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 LCE4AQ5TA78 99 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 ANKRD34AQ69YU3 496 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 NXPE3Q969Y0 559 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 ZKSCAN3Q9BRR0 538 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
CFAP54-207ENST00000554821 IKBKEQ14164 716 aa6.67□□□□□ -1.34
CFAP54-207ENST00000554821 HP1BP3Q5SSJ5 553 aaPredicted RBP6.67□□□□□ -1.34
CFAP54-207ENST00000554821 TXNDC11Q6PKC3 985 aa6.67□□□□□ -1.34
CFAP54-207ENST00000554821 TXNDC2Q86VQ3 553 aa6.67□□□□□ -1.34
CFAP54-207ENST00000554821 RETREG2Q8NC44 543 aa6.67□□□□□ -1.34
CFAP54-207ENST00000554821 ZFYVE28Q9HCC9 887 aa6.67□□□□□ -1.34
CFAP54-207ENST00000554821 SH2B1Q9NRF2 756 aaPredicted RBP6.67□□□□□ -1.34
CFAP54-207ENST00000554821 CCDC87Q9NVE4 849 aa6.67□□□□□ -1.34
CFAP54-207ENST00000554821 SERPINB4P48594 390 aa6.66□□□□□ -1.34
CFAP54-207ENST00000554821 DDX54Q8TDD1 881 aaKnown RBP6.66□□□□□ -1.34
CFAP54-207ENST00000554821 ARID3AQ99856 593 aa6.66□□□□□ -1.34
CFAP54-207ENST00000554821 CARD10Q9BWT7 1032 aa6.66□□□□□ -1.34
CFAP54-207ENST00000554821 ZFYVE1Q9HBF4 777 aa6.66□□□□□ -1.34
CFAP54-207ENST00000554821 ANO2Q9NQ90 1003 aa6.66□□□□□ -1.34
CFAP54-207ENST00000554821 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
CFAP54-207ENST00000554821 HIF3AQ9Y2N7 669 aa6.66□□□□□ -1.34
CFAP54-207ENST00000554821 CARNS1A5YM72 827 aa6.65□□□□□ -1.34
CFAP54-207ENST00000554821 TM4SF5O14894 197 aa6.65□□□□□ -1.34
CFAP54-207ENST00000554821 GALNT12Q8IXK2 581 aa6.65□□□□□ -1.34
CFAP54-207ENST00000554821 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
CFAP54-207ENST00000554821 DMRTB1Q96MA1 342 aa6.65□□□□□ -1.34
CFAP54-207ENST00000554821 DNAJC25Q9H1X3 360 aa6.65□□□□□ -1.34
CFAP54-207ENST00000554821 PCMTD2Q9NV79 361 aa6.65□□□□□ -1.34
CFAP54-207ENST00000554821 RAXQ9Y2V3 346 aa6.65□□□□□ -1.34
CFAP54-207ENST00000554821 MEGF11A6BM72 1044 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 SUPT5HO00267 1087 aaKnown RBP6.64□□□□□ -1.35
CFAP54-207ENST00000554821 ALX3O95076 343 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 BRD1O95696 1058 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 CDC25BP30305 580 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 ARHGAP4P98171 946 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 FDX2Q6P4F2 183 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 AGGF1Q8N302 714 aaeCLIP6.64□□□□□ -1.35
CFAP54-207ENST00000554821 FOXD4L4Q8WXT5 416 aaPredicted RBP6.64□□□□□ -1.35
CFAP54-207ENST00000554821 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 FAM46AQ96IP4 442 aaKnown RBP6.64□□□□□ -1.35
CFAP54-207ENST00000554821 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
CFAP54-207ENST00000554821 SART1O43290 800 aaKnown RBP6.63□□□□□ -1.35
CFAP54-207ENST00000554821 CPNE3O75131 537 aaKnown RBP6.63□□□□□ -1.35
CFAP54-207ENST00000554821 WISP1O95388 367 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 ACPPP15309 386 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 FSTP19883 344 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 HNRNPUQ00839 825 aaKnown RBP eCLIP6.63□□□□□ -1.35
CFAP54-207ENST00000554821 VN1R5Q7Z5H4 357 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 ASAP3Q8TDY4 903 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 SLC7A3Q8WY07 619 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 MYRFLQ96LU7 910 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 RUSC1Q9BVN2 902 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 KCNK4Q9NYG8 393 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 STOML1Q9UBI4 398 aa6.63□□□□□ -1.35
CFAP54-207ENST00000554821 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
CFAP54-207ENST00000554821 ADAM11O75078 769 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 KIAA0319Q5VV43 1072 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 PEAR1Q5VY43 1037 aaPredicted RBP6.62□□□□□ -1.35
CFAP54-207ENST00000554821 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
CFAP54-207ENST00000554821 CCNJLQ8IV13 435 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 UBASH3BQ8TF42 649 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 ALKBH8Q96BT7 664 aaKnown RBP6.62□□□□□ -1.35
CFAP54-207ENST00000554821 HHIPQ96QV1 700 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 RBCK1Q9BYM8 510 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
CFAP54-207ENST00000554821 SUGCTQ9HAC7 445 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 CYP4F12Q9HCS2 524 aa6.62□□□□□ -1.35
CFAP54-207ENST00000554821 ESRRAP11474 423 aaPredicted RBP6.61□□□□□ -1.35
CFAP54-207ENST00000554821 NLRP12P59046 1061 aa6.61□□□□□ -1.35
CFAP54-207ENST00000554821 PTPN12Q05209 780 aaKnown RBP6.61□□□□□ -1.35
CFAP54-207ENST00000554821 ADAMTSL4Q6UY14 1074 aa6.61□□□□□ -1.35
CFAP54-207ENST00000554821 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
CFAP54-207ENST00000554821 LIN7BQ9HAP6 207 aa6.61□□□□□ -1.35
CFAP54-207ENST00000554821 TRAK1Q9UPV9 953 aa6.61□□□□□ -1.35
CFAP54-207ENST00000554821 A0A1W2PP55 124 aa6.6□□□□□ -1.35
CFAP54-207ENST00000554821 GAS2O43903 313 aaKnown RBP6.6□□□□□ -1.35
CFAP54-207ENST00000554821 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
CFAP54-207ENST00000554821 ECM1Q16610 540 aa6.6□□□□□ -1.35
CFAP54-207ENST00000554821 NUTM2GQ5VZR2 741 aa6.6□□□□□ -1.35
CFAP54-207ENST00000554821 CLEC10AQ8IUN9 316 aa6.6□□□□□ -1.35
CFAP54-207ENST00000554821 TMC1Q8TDI8 760 aa6.6□□□□□ -1.35
CFAP54-207ENST00000554821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.6□□□□□ -1.35
CFAP54-207ENST00000554821 A0A096LPE4 126 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 A0A1W2PPZ6 126 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 SOWAHDA6NJG2 315 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 PATL2C9JE40 543 aaKnown RBP6.59□□□□□ -1.35
CFAP54-207ENST00000554821 SOX1O00570 391 aaPredicted RBP6.59□□□□□ -1.35
CFAP54-207ENST00000554821 DDX3YO15523 660 aaKnown RBP6.59□□□□□ -1.35
CFAP54-207ENST00000554821 TRPA1O75762 1119 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 CYP11A1P05108 521 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 PCDH1Q08174 1060 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 ARMC10Q8N2F6 343 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms