RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 CHMP3Q9Y3E7 222 aa18.54■□□□□ 0.56
CFAP54-206ENST00000554621 F8W031 263 aaPredicted RBP18.53■□□□□ 0.56
CFAP54-206ENST00000554621 FKBP5Q13451 457 aaPredicted RBP18.53■□□□□ 0.56
CFAP54-206ENST00000554621 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
CFAP54-206ENST00000554621 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
CFAP54-206ENST00000554621 TAF7LQ5H9L4 462 aa18.53■□□□□ 0.56
CFAP54-206ENST00000554621 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
CFAP54-206ENST00000554621 ZBED3Q96IU2 234 aaPredicted RBP18.53■□□□□ 0.56
CFAP54-206ENST00000554621 EFCC1Q9HA90 598 aa18.53■□□□□ 0.56
CFAP54-206ENST00000554621 SPEF2Q9C093 1822 aa18.53■□□□□ 0.56
CFAP54-206ENST00000554621 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.56
CFAP54-206ENST00000554621 NBPF11Q86T75 865 aa18.52■□□□□ 0.56
CFAP54-206ENST00000554621 TSPYL6Q8N831 410 aa18.52■□□□□ 0.56
CFAP54-206ENST00000554621 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
CFAP54-206ENST00000554621 CSF1RP07333 972 aa18.51■□□□□ 0.55
CFAP54-206ENST00000554621 SP3Q02447 781 aa18.51■□□□□ 0.55
CFAP54-206ENST00000554621 LINS1Q8NG48 757 aa18.51■□□□□ 0.55
CFAP54-206ENST00000554621 DNAAF4Q8WXU2 420 aa18.51■□□□□ 0.55
CFAP54-206ENST00000554621 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
CFAP54-206ENST00000554621 PTPN22Q9Y2R2 807 aa18.51■□□□□ 0.55
CFAP54-206ENST00000554621 CLRN2A0PK11 232 aa18.5■□□□□ 0.55
CFAP54-206ENST00000554621 SPDYE2BA6NHP3 402 aa18.5■□□□□ 0.55
CFAP54-206ENST00000554621 SPDYE6P0CI01 402 aa18.5■□□□□ 0.55
CFAP54-206ENST00000554621 KLRK1P26718 216 aa18.5■□□□□ 0.55
CFAP54-206ENST00000554621 FLIIQ13045 1269 aa18.5■□□□□ 0.55
CFAP54-206ENST00000554621 C15orf52Q6ZUT6 534 aaKnown RBP18.5■□□□□ 0.55
CFAP54-206ENST00000554621 TSR2Q969E8 191 aaKnown RBP18.5■□□□□ 0.55
CFAP54-206ENST00000554621 FZD1Q9UP38 647 aa18.5■□□□□ 0.55
CFAP54-206ENST00000554621 IGF2BP3O00425 579 aaKnown RBP eCLIP18.49■□□□□ 0.55
CFAP54-206ENST00000554621 CCDC57Q2TAC2 916 aa18.49■□□□□ 0.55
CFAP54-206ENST00000554621 CD99L2Q8TCZ2 262 aa18.49■□□□□ 0.55
CFAP54-206ENST00000554621 CLMNQ96JQ2 1002 aa18.49■□□□□ 0.55
CFAP54-206ENST00000554621 TAF5LO75529 589 aa18.48■□□□□ 0.55
CFAP54-206ENST00000554621 IL1R1P14778 569 aa18.48■□□□□ 0.55
CFAP54-206ENST00000554621 TNNI2P48788 182 aa18.48■□□□□ 0.55
CFAP54-206ENST00000554621 CRHR2Q13324 411 aa18.48■□□□□ 0.55
CFAP54-206ENST00000554621 RASA3Q14644 834 aa18.48■□□□□ 0.55
CFAP54-206ENST00000554621 HABP4Q5JVS0 413 aaKnown RBP18.48■□□□□ 0.55
CFAP54-206ENST00000554621 CNNM1Q9NRU3 951 aa18.48■□□□□ 0.55
CFAP54-206ENST00000554621 PLIN1O60240 522 aa18.47■□□□□ 0.55
CFAP54-206ENST00000554621 NBPF12Q5TAG4 269 aaPredicted RBP18.47■□□□□ 0.55
CFAP54-206ENST00000554621 HELBQ8NG08 1087 aaPredicted RBP18.47■□□□□ 0.55
CFAP54-206ENST00000554621 PRMT6Q96LA8 375 aaPredicted RBP18.47■□□□□ 0.55
CFAP54-206ENST00000554621 ZFYVE28Q9HCC9 887 aa18.47■□□□□ 0.55
CFAP54-206ENST00000554621 CSADQ9Y600 493 aa18.47■□□□□ 0.55
CFAP54-206ENST00000554621 POTEFA5A3E0 1075 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 USP2O75604 605 aaPredicted RBP18.46■□□□□ 0.55
CFAP54-206ENST00000554621 KIF22Q14807 665 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 LDHAL6AQ6ZMR3 332 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 G2E3Q7L622 706 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 CERS5Q8N5B7 392 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 ARMC5Q96C12 935 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 OPTNQ96CV9 577 aa18.46■□□□□ 0.55
CFAP54-206ENST00000554621 GTF2A2P52657 109 aa18.45■□□□□ 0.54
CFAP54-206ENST00000554621 SLC4A8Q2Y0W8 1093 aa18.45■□□□□ 0.54
CFAP54-206ENST00000554621 SLC9C1Q4G0N8 1177 aa18.45■□□□□ 0.54
CFAP54-206ENST00000554621 ELP3Q9H9T3 547 aa18.45■□□□□ 0.54
CFAP54-206ENST00000554621 SERPINA10Q9UK55 444 aa18.45■□□□□ 0.54
CFAP54-206ENST00000554621 TESPA1A2RU30 521 aaPredicted RBP18.44■□□□□ 0.54
CFAP54-206ENST00000554621 TAF1CQ15572 869 aaPredicted RBP18.44■□□□□ 0.54
CFAP54-206ENST00000554621 VPS37DQ86XT2 251 aa18.44■□□□□ 0.54
CFAP54-206ENST00000554621 TTF2Q9UNY4 1162 aaKnown RBP18.44■□□□□ 0.54
CFAP54-206ENST00000554621 IL16Q14005 1332 aa18.44■□□□□ 0.54
CFAP54-206ENST00000554621 CASP7P55210 303 aa18.43■□□□□ 0.54
CFAP54-206ENST00000554621 MFSD14BQ5SR56 506 aa18.43■□□□□ 0.54
CFAP54-206ENST00000554621 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
CFAP54-206ENST00000554621 HOOK2Q96ED9 719 aa18.43■□□□□ 0.54
CFAP54-206ENST00000554621 JAG2Q9Y219 1238 aa18.43■□□□□ 0.54
CFAP54-206ENST00000554621 ZNF646O15015 1829 aaPredicted RBP18.43■□□□□ 0.54
CFAP54-206ENST00000554621 ECM29Q5VYK3 1845 aa18.42■□□□□ 0.54
CFAP54-206ENST00000554621 FRAT2O75474 233 aaPredicted RBP18.42■□□□□ 0.54
CFAP54-206ENST00000554621 EN2P19622 333 aaPredicted RBP18.42■□□□□ 0.54
CFAP54-206ENST00000554621 HIBADHP31937 336 aaKnown RBP18.42■□□□□ 0.54
CFAP54-206ENST00000554621 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
CFAP54-206ENST00000554621 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
CFAP54-206ENST00000554621 LMBR1LQ6UX01 489 aa18.42■□□□□ 0.54
CFAP54-206ENST00000554621 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
CFAP54-206ENST00000554621 ZNF70Q9UC06 446 aaPredicted RBP18.42■□□□□ 0.54
CFAP54-206ENST00000554621 CCL15-CCL14A0A0B4J2E2 113 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 SNAP23O00161 211 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 UBE4AQ14139 1066 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 CCL15Q16663 113 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 TDRD3Q9H7E2 651 aaKnown RBP18.41■□□□□ 0.54
CFAP54-206ENST00000554621 TMOD2Q9NZR1 351 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 PCDHAC2Q9Y5I4 1007 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 SSC5DA1L4H1 1573 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 FAM205AQ6ZU69 1335 aa18.41■□□□□ 0.54
CFAP54-206ENST00000554621 TCP10L2B9ZVM9 353 aa18.4■□□□□ 0.54
CFAP54-206ENST00000554621 FOXO4P98177 505 aa18.4■□□□□ 0.54
CFAP54-206ENST00000554621 PTPN18Q99952 460 aa18.4■□□□□ 0.54
CFAP54-206ENST00000554621 GNRH1P01148 92 aa18.39■□□□□ 0.53
CFAP54-206ENST00000554621 CETPP11597 493 aa18.39■□□□□ 0.53
CFAP54-206ENST00000554621 GJA5P36382 358 aa18.39■□□□□ 0.53
CFAP54-206ENST00000554621 DZIP1LQ8IYY4 767 aaKnown RBP18.39■□□□□ 0.53
CFAP54-206ENST00000554621 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
CFAP54-206ENST00000554621 ZNF333Q96JL9 665 aa18.39■□□□□ 0.53
CFAP54-206ENST00000554621 IRS2Q9Y4H2 1338 aa18.39■□□□□ 0.53
CFAP54-206ENST00000554621 GRM8O00222 908 aa18.38■□□□□ 0.53
CFAP54-206ENST00000554621 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms