RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 OGFOD1Q8N543 542 aa13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 HELBQ8NG08 1087 aaPredicted RBP13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 MYOZ2Q9NPC6 264 aa13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 MROH5Q6ZUA9 1318 aa13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 PITPNM2Q9BZ72 1349 aa13.07□□□□□ -0.32
PTCD2P1-201ENST00000554393 IL1R1P14778 569 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 ECE1P42892 770 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 TTLL5Q6EMB2 1281 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 SULF1Q8IWU6 871 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 GGA3Q9NZ52 723 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 RIPOR2Q9Y4F9 1068 aa13.06□□□□□ -0.32
PTCD2P1-201ENST00000554393 SNAP23O00161 211 aa13.05□□□□□ -0.32
PTCD2P1-201ENST00000554393 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
PTCD2P1-201ENST00000554393 GTF2IP78347 998 aa13.05□□□□□ -0.32
PTCD2P1-201ENST00000554393 WDR33Q9C0J8 1336 aaKnown RBP13.05□□□□□ -0.32
PTCD2P1-201ENST00000554393 MYH13Q9UKX3 1938 aa13.05□□□□□ -0.32
PTCD2P1-201ENST00000554393 UBTFL1P0CB47 393 aaPredicted RBP13.04□□□□□ -0.32
PTCD2P1-201ENST00000554393 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTCD2P1-201ENST00000554393 SCARF1Q14162 830 aa13.04□□□□□ -0.32
PTCD2P1-201ENST00000554393 FBXW7Q969H0 707 aa13.04□□□□□ -0.32
PTCD2P1-201ENST00000554393 PUS3Q9BZE2 481 aaKnown RBP13.04□□□□□ -0.32
PTCD2P1-201ENST00000554393 HDAC9Q9UKV0 1011 aa13.04□□□□□ -0.32
PTCD2P1-201ENST00000554393 PAPPA2Q9BXP8 1791 aa13.04□□□□□ -0.32
PTCD2P1-201ENST00000554393 ADM5C9JUS6 153 aa13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 PLIN1O60240 522 aa13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 MXD3Q9BW11 206 aa13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 FAM205AQ6ZU69 1335 aa13.03□□□□□ -0.32
PTCD2P1-201ENST00000554393 WNT10BO00744 389 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 SASH1O94885 1247 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 PDE8BO95263 885 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 MAP2K2P36507 400 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 MAP2K1Q02750 393 aaPredicted RBP13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 LRRC24Q50LG9 513 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 METTL24Q5JXM2 366 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 KIAA0825Q8IV33 1275 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 MTMR14Q8NCE2 650 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 TDRD7Q8NHU6 1098 aaKnown RBP13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 WBP1LQ9NX94 342 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 ASTN2O75129 1339 aaPredicted RBP13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 COL1A1P02452 1464 aaPredicted RBP13.02□□□□□ -0.33
PTCD2P1-201ENST00000554393 HIBADHP31937 336 aaKnown RBP13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 FKBP1BP68106 108 aa13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 NBPF9Q3BBW0 867 aa13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 CYP4F22Q6NT55 531 aa13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 CERS5Q8N5B7 392 aa13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 C2orf69Q8N8R5 385 aa13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 CDCA5Q96FF9 252 aa13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 ZBED3Q96IU2 234 aaPredicted RBP13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
PTCD2P1-201ENST00000554393 EYA2O00167 538 aa13□□□□□ -0.33
PTCD2P1-201ENST00000554393 CIAO1O76071 339 aa13□□□□□ -0.33
PTCD2P1-201ENST00000554393 GNAI3P08754 354 aa13□□□□□ -0.33
PTCD2P1-201ENST00000554393 HSPA8P11142 646 aaKnown RBP13□□□□□ -0.33
PTCD2P1-201ENST00000554393 TRIM27P14373 513 aa13□□□□□ -0.33
PTCD2P1-201ENST00000554393 NUBP1P53384 320 aa13□□□□□ -0.33
PTCD2P1-201ENST00000554393 HUNKP57058 714 aa13□□□□□ -0.33
PTCD2P1-201ENST00000554393 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
PTCD2P1-201ENST00000554393 PUM3Q15397 648 aaKnown RBP13□□□□□ -0.33
PTCD2P1-201ENST00000554393 APOBEC3FQ8IUX4 373 aaKnown RBP13□□□□□ -0.33
PTCD2P1-201ENST00000554393 FGFR2P21802 821 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 GYG1P46976 350 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 NOGQ13253 232 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 KLHDC4Q8TBB5 520 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 MEIS3Q99687 375 aa12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
PTCD2P1-201ENST00000554393 BCAR3O75815 825 aa12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 MTX1Q13505 466 aa12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 DLGAP5Q15398 846 aa12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 MFSD14BQ5SR56 506 aa12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 RGMBQ6NW40 437 aa12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
PTCD2P1-201ENST00000554393 GRM1Q13255 1194 aa12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 ATG9AQ7Z3C6 839 aa12.97□□□□□ -0.33
PTCD2P1-201ENST00000554393 TBC1D22AQ8WUA7 517 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms