RNA–Protein interactions for RNA: ENST00000554124.2

STRN3-204, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-204ENST00000554124 ZKSCAN3Q9BRR0 538 aa7.12□□□□□ -1.27
STRN3-204ENST00000554124 RNF43Q68DV7 783 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 CLEC10AQ8IUN9 316 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 TRIM42Q8IWZ5 723 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 FAM20CQ8IXL6 584 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 DBNDD2Q9BQY9 259 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 C7orf69Q9H7B7 122 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 USTQ9Y2C2 406 aa7.11□□□□□ -1.27
STRN3-204ENST00000554124 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.11□□□□□ -1.27
STRN3-204ENST00000554124 BMP3P12645 472 aa7.1□□□□□ -1.27
STRN3-204ENST00000554124 CD97P48960 835 aa7.1□□□□□ -1.27
STRN3-204ENST00000554124 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
STRN3-204ENST00000554124 BHLHE41Q9C0J9 482 aaPredicted RBP7.1□□□□□ -1.27
STRN3-204ENST00000554124 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
STRN3-204ENST00000554124 HMX2A2RU54 273 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 MEGF11A6BM72 1044 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 FZD6O60353 706 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 TGFB1P01137 390 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 PREPP48147 710 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 ZNF211Q13398 564 aaPredicted RBP7.09□□□□□ -1.27
STRN3-204ENST00000554124 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 INTS5Q6P9B9 1019 aaKnown RBP7.09□□□□□ -1.27
STRN3-204ENST00000554124 BEND4Q6ZU67 534 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 GJD3Q8N144 294 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 GIMAP7Q8NHV1 300 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 FAM83CQ9BQN1 747 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 SOX17Q9H6I2 414 aaPredicted RBP7.09□□□□□ -1.27
STRN3-204ENST00000554124 CYP4F12Q9HCS2 524 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 EGFL7Q9UHF1 273 aa7.09□□□□□ -1.27
STRN3-204ENST00000554124 SOX1O00570 391 aaPredicted RBP7.08□□□□□ -1.28
STRN3-204ENST00000554124 NEFLP07196 543 aa7.08□□□□□ -1.28
STRN3-204ENST00000554124 VN1R5Q7Z5H4 357 aa7.08□□□□□ -1.28
STRN3-204ENST00000554124 ANO2Q9NQ90 1003 aa7.08□□□□□ -1.28
STRN3-204ENST00000554124 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
STRN3-204ENST00000554124 SUPT5HO00267 1087 aaKnown RBP7.07□□□□□ -1.28
STRN3-204ENST00000554124 RXRBP28702 533 aa7.07□□□□□ -1.28
STRN3-204ENST00000554124 PHLDB3Q6NSJ2 640 aa7.07□□□□□ -1.28
STRN3-204ENST00000554124 ZDHHC13Q8IUH4 622 aa7.07□□□□□ -1.28
STRN3-204ENST00000554124 GLYCTKQ8IVS8 523 aa7.07□□□□□ -1.28
STRN3-204ENST00000554124 C12orf50Q8NA57 414 aaPredicted RBP7.07□□□□□ -1.28
STRN3-204ENST00000554124 C1orf115Q9H7X2 142 aa7.07□□□□□ -1.28
STRN3-204ENST00000554124 ZFYVE28Q9HCC9 887 aa7.07□□□□□ -1.28
STRN3-204ENST00000554124 CCDC87Q9NVE4 849 aa7.07□□□□□ -1.28
STRN3-204ENST00000554124 GSTM4Q03013 218 aa7.06□□□□□ -1.28
STRN3-204ENST00000554124 HP1BP3Q5SSJ5 553 aaPredicted RBP7.06□□□□□ -1.28
STRN3-204ENST00000554124 LATS2Q9NRM7 1088 aa7.06□□□□□ -1.28
STRN3-204ENST00000554124 CARNS1A5YM72 827 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 KIAA1324LA8MWY0 1029 aaPredicted RBP7.05□□□□□ -1.28
STRN3-204ENST00000554124 H3BRB1 525 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 NDUFB5O43674 189 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 ICMTO60725 284 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 ESRRAP11474 423 aaPredicted RBP7.05□□□□□ -1.28
STRN3-204ENST00000554124 MAP4P27816 1152 aaKnown RBP7.05□□□□□ -1.28
STRN3-204ENST00000554124 PEAR1Q5VY43 1037 aaPredicted RBP7.05□□□□□ -1.28
STRN3-204ENST00000554124 HGSNATQ68CP4 663 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 SMG8Q8ND04 991 aaKnown RBP7.05□□□□□ -1.28
STRN3-204ENST00000554124 YIPF2Q9BWQ6 316 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 TMPRSS13Q9BYE2 586 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 TUT1Q9H6E5 874 aaKnown RBP7.05□□□□□ -1.28
STRN3-204ENST00000554124 SUGCTQ9HAC7 445 aa7.05□□□□□ -1.28
STRN3-204ENST00000554124 LOC100289279A0A1B0GTE1 492 aa7.04□□□□□ -1.28
STRN3-204ENST00000554124 USP11P51784 963 aa7.04□□□□□ -1.28
STRN3-204ENST00000554124 PDE3BQ13370 1112 aa7.04□□□□□ -1.28
STRN3-204ENST00000554124 EXOSC6Q5RKV6 272 aaKnown RBP7.04□□□□□ -1.28
STRN3-204ENST00000554124 HOMEZQ8IX15 550 aa7.04□□□□□ -1.28
STRN3-204ENST00000554124 SHKBP1Q8TBC3 707 aa7.04□□□□□ -1.28
STRN3-204ENST00000554124 DDX54Q8TDD1 881 aaKnown RBP7.04□□□□□ -1.28
STRN3-204ENST00000554124 ZFYVE1Q9HBF4 777 aa7.04□□□□□ -1.28
STRN3-204ENST00000554124 ATG3Q9NT62 314 aa7.04□□□□□ -1.28
STRN3-204ENST00000554124 CYP11A1P05108 521 aa7.03□□□□□ -1.28
STRN3-204ENST00000554124 POLR3DP05423 398 aaPredicted RBP7.03□□□□□ -1.28
STRN3-204ENST00000554124 IRAK1P51617 712 aa7.03□□□□□ -1.28
STRN3-204ENST00000554124 MCTP1Q6DN14 999 aa7.03□□□□□ -1.28
STRN3-204ENST00000554124 GALNT12Q8IXK2 581 aa7.03□□□□□ -1.28
STRN3-204ENST00000554124 CLEC4MQ9H2X3 399 aaPredicted RBP7.03□□□□□ -1.28
STRN3-204ENST00000554124 LIN7BQ9HAP6 207 aa7.03□□□□□ -1.28
STRN3-204ENST00000554124 A0A096LPE4 126 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 A0A1W2PPZ6 126 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 PCDH1Q08174 1060 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 PDE4CQ08493 712 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 PAOXQ6QHF9 649 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 CCNJLQ8IV13 435 aa7.02□□□□□ -1.29
STRN3-204ENST00000554124 FAM95CA0A1B0GW59 222 aa7.01□□□□□ -1.29
STRN3-204ENST00000554124 PRR19A6NJB7 356 aa7.01□□□□□ -1.29
STRN3-204ENST00000554124 METTL12A8MUP2 240 aa7.01□□□□□ -1.29
STRN3-204ENST00000554124 TIAF1O95411 115 aa7.01□□□□□ -1.29
STRN3-204ENST00000554124 GP2P55259 537 aaKnown RBP7.01□□□□□ -1.29
STRN3-204ENST00000554124 NFKBIBQ15653 356 aa7.01□□□□□ -1.29
STRN3-204ENST00000554124 CPSF6Q16630 551 aaKnown RBP eCLIP7.01□□□□□ -1.29
STRN3-204ENST00000554124 MFSD14AQ96MC6 490 aa7.01□□□□□ -1.29
STRN3-204ENST00000554124 OSBPL1AQ9BXW6 950 aa7.01□□□□□ -1.29
STRN3-204ENST00000554124 A0A1W2PP55 124 aa7□□□□□ -1.29
STRN3-204ENST00000554124 PAX4O43316 350 aa7□□□□□ -1.29
STRN3-204ENST00000554124 CPNE3O75131 537 aaKnown RBP7□□□□□ -1.29
STRN3-204ENST00000554124 MED26O95402 600 aa7□□□□□ -1.29
STRN3-204ENST00000554124 SERPINB4P48594 390 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms