RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 COA1Q9GZY4 146 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
TMEM55B-205ENST00000554028 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 RIMBP2O15034 1052 aa12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 SCARF1Q14162 830 aa12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 SPTY2D1Q68D10 685 aaPredicted RBP12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 WDR66Q8TBY9 1149 aa12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 LRP2BPQ9P2M1 347 aa12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 IQSEC3Q9UPP2 1182 aaPredicted RBP12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 RFX7Q2KHR2 1363 aa12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 COL4A1P02462 1669 aa12.63□□□□□ -0.39
TMEM55B-205ENST00000554028 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 IGSF3O75054 1194 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 CYP2E1P05181 493 aaPredicted RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 KLRK1P26718 216 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 MFAP1P55081 439 aaKnown RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 TXNRD3Q86VQ6 643 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 TDRD7Q8NHU6 1098 aaKnown RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 ESYT1Q9BSJ8 1104 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 RTFDC1Q9BY42 306 aaPredicted RBP12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 VPS33BQ9H267 617 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 CD209Q9NNX6 404 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 ABCF2Q9UG63 623 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
TMEM55B-205ENST00000554028 RNF113AO15541 343 aaKnown RBP12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 IL1R1P14778 569 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 PI16Q6UXB8 463 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 TBC1D22AQ8WUA7 517 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 PSMD1Q99460 953 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 ANTXR1Q9H6X2 564 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 RAI14Q9P0K7 980 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 TAF1P21675 1872 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
TMEM55B-205ENST00000554028 SLC9C2Q5TAH2 1124 aa12.6□□□□□ -0.39
TMEM55B-205ENST00000554028 TMED8Q6PL24 325 aaPredicted RBP12.6□□□□□ -0.39
TMEM55B-205ENST00000554028 ERICH6Q7L0X2 663 aa12.6□□□□□ -0.39
TMEM55B-205ENST00000554028 PODNQ7Z5L7 613 aa12.6□□□□□ -0.39
TMEM55B-205ENST00000554028 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
TMEM55B-205ENST00000554028 RAD50Q92878 1312 aa12.6□□□□□ -0.39
TMEM55B-205ENST00000554028 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 PPIP5K2O43314 1243 aa12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 MCCP23508 829 aa12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 KIAA2012Q0VF49 1180 aa12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 NMIQ13287 307 aaPredicted RBP12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 FHDC1Q9C0D6 1143 aaPredicted RBP12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 ANO2Q9NQ90 1003 aa12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
TMEM55B-205ENST00000554028 SGSM2O43147 1006 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 EPB41L2O43491 1005 aaKnown RBP12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 SEC24BO95487 1268 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 LDHBP07195 334 aaKnown RBP12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 GSTO1P78417 241 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 LARGE2Q8N3Y3 721 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 APPBP2Q92624 585 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 FBXW7Q969H0 707 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 SALL1Q9NSC2 1324 aa12.58□□□□□ -0.4
TMEM55B-205ENST00000554028 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 LDHCP07864 332 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 ADD2P35612 726 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 GTF2IP78347 998 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 AOC3Q16853 763 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 ZMYM1Q5SVZ6 1142 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 NAA16Q6N069 864 aaPredicted RBP12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 MAGEB6Q8N7X4 407 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 C22orf23Q9BZE7 217 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 TAOK3Q9H2K8 898 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 LRRC37AA6NMS7 1700 aa12.57□□□□□ -0.4
TMEM55B-205ENST00000554028 KIF13BQ9NQT8 1826 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 ECE2O60344 883 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 PDE6AP16499 860 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 CYP7A1P22680 504 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 NIM1KQ8IY84 436 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 JDP2Q8WYK2 163 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 NOL10Q9BSC4 688 aaKnown RBP12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 SYT17Q9BSW7 474 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 DBNDD1Q9H9R9 158 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 SUGT1Q9Y2Z0 365 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 ZNF532Q9HCE3 1301 aa12.56□□□□□ -0.4
TMEM55B-205ENST00000554028 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms