RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 COLQQ9Y215 455 aaPredicted RBP9.89□□□□□ -0.83
ABCD4-220ENST00000553998 SSC5DA1L4H1 1573 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 IRS2Q9Y4H2 1338 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 H7C1W4 665 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 USP2O75604 605 aaPredicted RBP9.88□□□□□ -0.83
ABCD4-220ENST00000553998 DDX58O95786 925 aaKnown RBP9.88□□□□□ -0.83
ABCD4-220ENST00000553998 FKBP1AP62942 108 aaKnown RBP9.88□□□□□ -0.83
ABCD4-220ENST00000553998 GTF2IP78347 998 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 DLGAP5Q15398 846 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 KSR2Q6VAB6 950 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 CERS5Q8N5B7 392 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 MS4A4AQ96JQ5 239 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 PLA2G12BQ9BX93 195 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 ANKRD2Q9GZV1 360 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 CD209Q9NNX6 404 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 IFT57Q9NWB7 429 aa9.88□□□□□ -0.83
ABCD4-220ENST00000553998 SPDYE2BA6NHP3 402 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 CSF1RP07333 972 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 SPDYE6P0CI01 402 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 KLRK1P26718 216 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 IREB2P48200 963 aaKnown RBP9.87□□□□□ -0.83
ABCD4-220ENST00000553998 GNAI1P63096 354 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 ARHGEF6Q15052 776 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 NBPF11Q86T75 865 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 ANKRD13AQ8IZ07 590 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 MAP3K2Q9Y2U5 619 aa9.87□□□□□ -0.83
ABCD4-220ENST00000553998 ZNF521Q96K83 1311 aa9.86□□□□□ -0.83
ABCD4-220ENST00000553998 IL1R1P14778 569 aa9.86□□□□□ -0.83
ABCD4-220ENST00000553998 IGHMBP2P38935 993 aaKnown RBP9.86□□□□□ -0.83
ABCD4-220ENST00000553998 NBPF12Q5TAG4 269 aaPredicted RBP9.86□□□□□ -0.83
ABCD4-220ENST00000553998 C8orf58Q8NAV2 365 aa9.86□□□□□ -0.83
ABCD4-220ENST00000553998 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
ABCD4-220ENST00000553998 PRMT6Q96LA8 375 aaPredicted RBP9.86□□□□□ -0.83
ABCD4-220ENST00000553998 ZNF646O15015 1829 aaPredicted RBP9.85□□□□□ -0.83
ABCD4-220ENST00000553998 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 NEURL1BA8MQ27 555 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 MYO1BO43795 1136 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 CASP7P55210 303 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 RASA3Q14644 834 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 CCDC30Q5VVM6 783 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
ABCD4-220ENST00000553998 PCDHAC2Q9Y5I4 1007 aa9.85□□□□□ -0.83
ABCD4-220ENST00000553998 RBBP6Q7Z6E9 1792 aaKnown RBP9.84□□□□□ -0.83
ABCD4-220ENST00000553998 H0YGN5 161 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 ELL2O00472 640 aaPredicted RBP9.84□□□□□ -0.83
ABCD4-220ENST00000553998 ITGA6P23229 1130 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 HNRNPUQ00839 825 aaKnown RBP eCLIP9.84□□□□□ -0.83
ABCD4-220ENST00000553998 CHRNDQ07001 517 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 CFAP100Q494V2 611 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 SLC9C1Q4G0N8 1177 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.84□□□□□ -0.83
ABCD4-220ENST00000553998 BRI3BPQ8WY22 251 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 ZFYVE28Q9HCC9 887 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 PTCH2Q9Y6C5 1203 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 KIAA0100Q14667 2235 aaKnown RBP9.84□□□□□ -0.83
ABCD4-220ENST00000553998 MYH3P11055 1940 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 A0A0C4DFX4 3053 aa9.84□□□□□ -0.83
ABCD4-220ENST00000553998 AOX1Q06278 1338 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 CLRN2A0PK11 232 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 E9PSI1 815 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 GNRH1P01148 92 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 GTF2A2P52657 109 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 NEXNQ0ZGT2 675 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 GCKRQ14397 625 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 CWF19L2Q2TBE0 894 aaKnown RBP9.83□□□□□ -0.84
ABCD4-220ENST00000553998 OPTNQ96CV9 577 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 TEPSINQ96N21 525 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 MPHOSPH8Q99549 860 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 PRO3102Q9H379 93 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 ZCCHC17Q9NP64 241 aaKnown RBP9.83□□□□□ -0.84
ABCD4-220ENST00000553998 LAMB1P07942 1786 aa9.83□□□□□ -0.84
ABCD4-220ENST00000553998 SPEF2Q9C093 1822 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 TLR2O60603 784 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 PRMT2P55345 433 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 TNFAIP1Q13829 316 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 SLC4A8Q2Y0W8 1093 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 UBE3BQ7Z3V4 1068 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 UBE2Q1Q7Z7E8 422 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 FAM43AQ8N2R8 423 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.82□□□□□ -0.842e-6■■■□□ 15.6
ABCD4-220ENST00000553998 ELP3Q9H9T3 547 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 LAMA3Q16787 3333 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 ZBED9Q6R2W3 1325 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 FAM205AQ6ZU69 1335 aa9.82□□□□□ -0.84
ABCD4-220ENST00000553998 CCL15-CCL14A0A0B4J2E2 113 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 SNAP23O00161 211 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 KCNJ4P48050 445 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 LACTBP83111 547 aaPredicted RBP9.81□□□□□ -0.84
ABCD4-220ENST00000553998 SLFN5Q08AF3 891 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 TAF1CQ15572 869 aaPredicted RBP9.81□□□□□ -0.84
ABCD4-220ENST00000553998 CCL15Q16663 113 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 ZNF804AQ7Z570 1209 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 TSPYL6Q8N831 410 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 VEZTQ9HBM0 779 aa9.81□□□□□ -0.84
ABCD4-220ENST00000553998 RBM27Q9P2N5 1060 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms