RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 WTIPA6NIX2 430 aaPredicted RBP16.31■□□□□ 0.2
AF111169.3-201ENST00000553991 CAP1Q01518 475 aa16.31■□□□□ 0.2
AF111169.3-201ENST00000553991 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
AF111169.3-201ENST00000553991 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
AF111169.3-201ENST00000553991 MINPP1Q9UNW1 487 aa16.31■□□□□ 0.2
AF111169.3-201ENST00000553991 SSC5DA1L4H1 1573 aa16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 GJA5P36382 358 aa16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 IREB2P48200 963 aaKnown RBP16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 CCT4P50991 539 aaKnown RBP16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 PTPN18Q99952 460 aa16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 MYH16Q9H6N6 1097 aa16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
AF111169.3-201ENST00000553991 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 DLGAP5Q15398 846 aa16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 MYD88Q99836 296 aa16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 RBM27Q9P2N5 1060 aaKnown RBP16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 LEMD3Q9Y2U8 911 aa16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 COL6A3P12111 3177 aa16.29■□□□□ 0.2
AF111169.3-201ENST00000553991 ZNF804BA4D1E1 1349 aa16.28■□□□□ 0.2
AF111169.3-201ENST00000553991 CTSWP56202 376 aa16.28■□□□□ 0.2
AF111169.3-201ENST00000553991 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
AF111169.3-201ENST00000553991 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
AF111169.3-201ENST00000553991 MTMR14Q8NCE2 650 aa16.28■□□□□ 0.2
AF111169.3-201ENST00000553991 MYO1BO43795 1136 aa16.27■□□□□ 0.2
AF111169.3-201ENST00000553991 GTF2IP78347 998 aa16.27■□□□□ 0.2
AF111169.3-201ENST00000553991 TSPYL6Q8N831 410 aa16.27■□□□□ 0.2
AF111169.3-201ENST00000553991 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
AF111169.3-201ENST00000553991 ZFYVE28Q9HCC9 887 aa16.27■□□□□ 0.2
AF111169.3-201ENST00000553991 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
AF111169.3-201ENST00000553991 ZNF521Q96K83 1311 aa16.26■□□□□ 0.19
AF111169.3-201ENST00000553991 MS4A4AQ96JQ5 239 aa16.26■□□□□ 0.19
AF111169.3-201ENST00000553991 LAMB1P07942 1786 aa16.26■□□□□ 0.19
AF111169.3-201ENST00000553991 USP2O75604 605 aaPredicted RBP16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 MYCP01106 439 aaPredicted RBP16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 TAF1CQ15572 869 aaPredicted RBP16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 NBPF12Q5TAG4 269 aaPredicted RBP16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 DPF3Q92784 378 aa16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 GREM2Q9H772 168 aa16.25■□□□□ 0.19
AF111169.3-201ENST00000553991 ZNF646O15015 1829 aaPredicted RBP16.24■□□□□ 0.19
AF111169.3-201ENST00000553991 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
AF111169.3-201ENST00000553991 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
AF111169.3-201ENST00000553991 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
AF111169.3-201ENST00000553991 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
AF111169.3-201ENST00000553991 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 KLRK1P26718 216 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 KIF22Q14807 665 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 SH3TC2Q8TF17 1288 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 ANKRD2Q9GZV1 360 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 PRO3102Q9H379 93 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 ELP3Q9H9T3 547 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 VEZTQ9HBM0 779 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 CACNA1FO60840 1977 aa16.23■□□□□ 0.19
AF111169.3-201ENST00000553991 WDHD1O75717 1129 aaPredicted RBP16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 GNRH1P01148 92 aa16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 GTF2A2P52657 109 aa16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 RASA3Q14644 834 aa16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 CFAP100Q494V2 611 aa16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 CERS5Q8N5B7 392 aa16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
AF111169.3-201ENST00000553991 LAMA3Q16787 3333 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 CCL15-CCL14A0A0B4J2E2 113 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 PRMT2P55345 433 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 TNFAIP1Q13829 316 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 CCL15Q16663 113 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 KSR2Q6VAB6 950 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 SHISA4Q96DD7 197 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 HTATIP2Q9BUP3 242 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 PCDHAC2Q9Y5I4 1007 aa16.21■□□□□ 0.19
AF111169.3-201ENST00000553991 E9PSI1 815 aa16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 VAMP4O75379 141 aa16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 KCNJ4P48050 445 aa16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 LACTBP83111 547 aaPredicted RBP16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 NEXNQ0ZGT2 675 aa16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 DIEXFQ68CQ4 756 aaKnown RBP16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 PRMT6Q96LA8 375 aaPredicted RBP16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 NR2E3Q9Y5X4 410 aa16.2■□□□□ 0.18
AF111169.3-201ENST00000553991 A0A1W2PPC1 479 aa16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 TLR2O60603 784 aa16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 MNX1P50219 401 aaPredicted RBP16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 FKBP1AP62942 108 aaKnown RBP16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 FLIIQ13045 1269 aa16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 ARHGAP39Q9C0H5 1083 aa16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 ZCCHC17Q9NP64 241 aaKnown RBP16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
AF111169.3-201ENST00000553991 PI4KAP2A4QPH2 592 aa16.18■□□□□ 0.18
AF111169.3-201ENST00000553991 F8W031 263 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms